RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C RTS3P53289 263 aa2.69□□□□□ -1.98
VPS35YJL154C NRG1Q03125 231 aa2.69□□□□□ -1.98
VPS35YJL154C TMA10Q06177 86 aa2.69□□□□□ -1.98
VPS35YJL154C IRC20Q06554 1556 aa2.69□□□□□ -1.98
VPS35YJL154C HCA4P20448 770 aaKnown RBP2.68□□□□□ -1.98
VPS35YJL154C EUG1P32474 517 aa2.68□□□□□ -1.98
VPS35YJL154C AVT1P47082 602 aa2.68□□□□□ -1.98
VPS35YJL154C YJR120WP47157 116 aa2.68□□□□□ -1.98
VPS35YJL154C SPC105P53148 917 aa2.68□□□□□ -1.98
VPS35YJL154C ASI2P53895 289 aa2.68□□□□□ -1.98
VPS35YJL154C MUS81Q04149 632 aaPredicted RBP2.68□□□□□ -1.98
VPS35YJL154C DUS4Q06063 367 aa2.68□□□□□ -1.98
VPS35YJL154C SGO1Q08490 590 aa2.68□□□□□ -1.98
VPS35YJL154C TMA7Q3E764 64 aaKnown RBP2.68□□□□□ -1.98
VPS35YJL154C YLR358CO13565 187 aa2.68□□□□□ -1.98
VPS35YJL154C FBP1P09201 348 aa2.68□□□□□ -1.98
VPS35YJL154C SEC21P32074 935 aaKnown RBP2.68□□□□□ -1.98
VPS35YJL154C NOP2P40991 618 aaKnown RBP2.68□□□□□ -1.98
VPS35YJL154C CHA4P43634 648 aa2.68□□□□□ -1.98
VPS35YJL154C RNR4P49723 345 aaKnown RBP2.68□□□□□ -1.98
VPS35YJL154C NCS6P53088 359 aa2.68□□□□□ -1.98
VPS35YJL154C YMR210WQ03649 449 aa2.68□□□□□ -1.98
VPS35YJL154C YDR132CQ03900 495 aa2.68□□□□□ -1.98
VPS35YJL154C YPR027CQ12079 277 aa2.68□□□□□ -1.98
VPS35YJL154C NYV1Q12255 253 aa2.68□□□□□ -1.98
VPS35YJL154C YLR415CO13578 112 aa2.67□□□□□ -1.98
VPS35YJL154C SEC65P29478 273 aa2.67□□□□□ -1.98
VPS35YJL154C YBR071WP38243 211 aa2.67□□□□□ -1.98
VPS35YJL154C YBR259WP38338 688 aa2.67□□□□□ -1.98
VPS35YJL154C PEA2P40091 420 aa2.67□□□□□ -1.98
VPS35YJL154C DUG1P43616 481 aaKnown RBP2.67□□□□□ -1.98
VPS35YJL154C TAN1P53072 289 aaPredicted RBP2.67□□□□□ -1.98
VPS35YJL154C MCM6P53091 1017 aaKnown RBP2.67□□□□□ -1.98
VPS35YJL154C TRM11Q12463 433 aa2.67□□□□□ -1.98
VPS35YJL154C KCS1Q12494 1050 aa2.67□□□□□ -1.98
VPS35YJL154C MET3P08536 511 aa2.67□□□□□ -1.98
VPS35YJL154C SEC15P22224 910 aa2.67□□□□□ -1.98
VPS35YJL154C MNN4P36044 1178 aa2.67□□□□□ -1.98
VPS35YJL154C RPP1P38786 293 aa2.67□□□□□ -1.98
VPS35YJL154C MSS4P38994 779 aa2.67□□□□□ -1.98
VPS35YJL154C DUN1P39009 513 aa2.67□□□□□ -1.98
VPS35YJL154C GAD1Q04792 585 aa2.67□□□□□ -1.98
VPS35YJL154C MIH1P23748 554 aa2.66□□□□□ -1.98
VPS35YJL154C TFC4P33339 1025 aa2.66□□□□□ -1.98
VPS35YJL154C MIP6P38760 659 aaKnown RBP2.66□□□□□ -1.98
VPS35YJL154C EMP65P40085 556 aa2.66□□□□□ -1.98
VPS35YJL154C SET2P46995 733 aaKnown RBP2.66□□□□□ -1.98
VPS35YJL154C DAS1P47005 663 aa2.66□□□□□ -1.98
VPS35YJL154C CDC6P09119 513 aa2.66□□□□□ -1.98
VPS35YJL154C STE14P32584 239 aa2.66□□□□□ -1.98
VPS35YJL154C YHR202WP38887 602 aa2.66□□□□□ -1.98
VPS35YJL154C CCT5P40413 562 aaKnown RBP2.66□□□□□ -1.98
VPS35YJL154C SLD3P53135 668 aa2.66□□□□□ -1.98
VPS35YJL154C CDA2Q06703 312 aa2.66□□□□□ -1.98
VPS35YJL154C ISA1Q07821 250 aaPredicted RBP2.66□□□□□ -1.98
VPS35YJL154C YOL057WQ08225 711 aa2.66□□□□□ -1.98
VPS35YJL154C MET5P47169 1442 aa2.66□□□□□ -1.98
VPS35YJL154C SSK2P53599 1579 aa2.66□□□□□ -1.98
VPS35YJL154C PYC1P11154 1178 aaKnown RBP2.65□□□□□ -1.98
VPS35YJL154C YEF3P16521 1044 aaKnown RBP2.65□□□□□ -1.98
VPS35YJL154C PFK1P16861 987 aaKnown RBP2.65□□□□□ -1.98
VPS35YJL154C PRP6P19735 899 aaPredicted RBP2.65□□□□□ -1.98
VPS35YJL154C STE11P23561 717 aa2.65□□□□□ -1.98
VPS35YJL154C RNQ1P25367 405 aa2.65□□□□□ -1.98
VPS35YJL154C KAR4P25583 335 aa2.65□□□□□ -1.98
VPS35YJL154C MPT5P39016 859 aaKnown RBP RIP-Chip data2.65□□□□□ -1.98not detected
VPS35YJL154C FKH2P41813 862 aa2.65□□□□□ -1.98
VPS35YJL154C MNN10P50108 393 aaKnown RBP2.65□□□□□ -1.98
VPS35YJL154C ECM9Q02202 377 aa2.65□□□□□ -1.98
VPS35YJL154C REC102Q02721 264 aa2.65□□□□□ -1.98
VPS35YJL154C SKY1Q03656 742 aa2.65□□□□□ -1.98
VPS35YJL154C RGA2Q06407 1009 aa2.65□□□□□ -1.98
VPS35YJL154C SIC1P38634 284 aa2.65□□□□□ -1.99
VPS35YJL154C SSZ1P38788 538 aaKnown RBP2.65□□□□□ -1.99
VPS35YJL154C YJR039WP47107 1121 aa2.65□□□□□ -1.99
VPS35YJL154C COG6P53959 839 aa2.65□□□□□ -1.99
VPS35YJL154C SND1Q04007 877 aa2.65□□□□□ -1.99
VPS35YJL154C ASM4Q05166 528 aa2.65□□□□□ -1.99
VPS35YJL154C VHS3Q08438 674 aa2.65□□□□□ -1.99
VPS35YJL154C DIA2Q08496 732 aaPredicted RBP2.65□□□□□ -1.99
VPS35YJL154C TRZ1P36159 838 aaPredicted RBP2.64□□□□□ -1.99
VPS35YJL154C EXG2P52911 562 aa2.64□□□□□ -1.99
VPS35YJL154C HOL1P53389 586 aa2.64□□□□□ -1.99
VPS35YJL154C CTK1Q03957 528 aaKnown RBP2.64□□□□□ -1.99
VPS35YJL154C DLT1Q04216 342 aa2.64□□□□□ -1.99
VPS35YJL154C PHM6Q05637 104 aa2.64□□□□□ -1.99
VPS35YJL154C URN1Q06525 465 aaKnown RBP2.64□□□□□ -1.99
VPS35YJL154C MCM21Q06675 368 aa2.64□□□□□ -1.99
VPS35YJL154C AIM39Q08223 395 aa2.64□□□□□ -1.99
VPS35YJL154C ENB1Q08299 606 aa2.64□□□□□ -1.99
VPS35YJL154C DCS2Q12123 353 aa2.64□□□□□ -1.99
VPS35YJL154C RPS9BP05755 195 aaKnown RBP2.64□□□□□ -1.99
VPS35YJL154C ERG20P08524 352 aaKnown RBP2.64□□□□□ -1.99
VPS35YJL154C COX11P19516 300 aaKnown RBP2.64□□□□□ -1.99
VPS35YJL154C PRE10P21242 288 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99not detected
VPS35YJL154C TSA1P34760 196 aaKnown RBP2.64□□□□□ -1.99
VPS35YJL154C APL2P36000 726 aaPredicted RBP2.64□□□□□ -1.99
VPS35YJL154C OAF3P36023 863 aa2.64□□□□□ -1.99
VPS35YJL154C BIT2P38346 545 aa2.64□□□□□ -1.99
VPS35YJL154C NRD1P53617 575 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99not detected
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms