RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C AI5_BETAQ9ZZX0 354 aa3.79□□□□□ -1.8
SSM4YIL030C YLR462WO13556 202 aa3.79□□□□□ -1.8
SSM4YIL030C PHR1P05066 565 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
SSM4YIL030C SIN4P32259 974 aa3.79□□□□□ -1.8
SSM4YIL030C PET10P36139 283 aa3.79□□□□□ -1.8
SSM4YIL030C YHL049CP38722 271 aa3.79□□□□□ -1.8
SSM4YIL030C YHB1P39676 399 aaKnown RBP3.79□□□□□ -1.8
SSM4YIL030C ERP2P39704 215 aa3.79□□□□□ -1.8
SSM4YIL030C YEL075CP39972 122 aa3.79□□□□□ -1.8
SSM4YIL030C YER189WP40104 122 aa3.79□□□□□ -1.8
SSM4YIL030C VHR1P40522 640 aa3.79□□□□□ -1.8
SSM4YIL030C YFL064CP43540 174 aa3.79□□□□□ -1.8
SSM4YIL030C DAS1P47005 663 aa3.79□□□□□ -1.8
SSM4YIL030C PRY3P47033 881 aa3.79□□□□□ -1.8
SSM4YIL030C ROD1Q02805 837 aa3.79□□□□□ -1.8
SSM4YIL030C GAL83Q04739 417 aa3.79□□□□□ -1.8
SSM4YIL030C LCB5Q06147 687 aaKnown RBP3.79□□□□□ -1.8
SSM4YIL030C TRE1Q08919 783 aa3.79□□□□□ -1.8
SSM4YIL030C AIM41Q12032 185 aa3.79□□□□□ -1.8
SSM4YIL030C YEL077CQ3E7X8 1277 aa3.79□□□□□ -1.8
SSM4YIL030C YBL111CQ3E7Y5 667 aa3.79□□□□□ -1.8
SSM4YIL030C UBR1P19812 1950 aa3.79□□□□□ -1.8
SSM4YIL030C YAK1P14680 807 aa3.78□□□□□ -1.8
SSM4YIL030C POL3P15436 1097 aa3.78□□□□□ -1.8
SSM4YIL030C GCD6P32501 712 aaKnown RBP3.78□□□□□ -1.8
SSM4YIL030C SUV3P32580 737 aa3.78□□□□□ -1.8
SSM4YIL030C YKR015CP36111 568 aa3.78□□□□□ -1.8
SSM4YIL030C YBR285WP38354 144 aa3.78□□□□□ -1.8
SSM4YIL030C KIC1P38692 1080 aa3.78□□□□□ -1.8
SSM4YIL030C UTP9P38882 575 aaKnown RBP3.78□□□□□ -1.8
SSM4YIL030C GDH3P39708 457 aa3.78□□□□□ -1.8
SSM4YIL030C UBP15P50101 1230 aa3.78□□□□□ -1.8
SSM4YIL030C ASE1P50275 885 aa3.78□□□□□ -1.8
SSM4YIL030C SMC6Q12749 1114 aa3.78□□□□□ -1.8
SSM4YIL030C RNR1P21524 888 aaKnown RBP3.78□□□□□ -1.8
SSM4YIL030C RRT12P25381 491 aa3.78□□□□□ -1.8
SSM4YIL030C RPC53P25441 422 aa3.78□□□□□ -1.8
SSM4YIL030C HSP30P25619 332 aa3.78□□□□□ -1.8
SSM4YIL030C CDC48P25694 835 aaKnown RBP3.78□□□□□ -1.8
SSM4YIL030C IRE1P32361 1115 aa3.78□□□□□ -1.8
SSM4YIL030C TFC1P32367 649 aa3.78□□□□□ -1.8
SSM4YIL030C UTP11P34247 250 aaPredicted RBP3.78□□□□□ -1.8
SSM4YIL030C DEF1P35732 738 aaKnown RBP3.78□□□□□ -1.8
SSM4YIL030C ERT1P38140 529 aa3.78□□□□□ -1.8
SSM4YIL030C NOC2P39744 710 aaKnown RBP3.78□□□□□ -1.8
SSM4YIL030C DPH1P40487 425 aaKnown RBP3.78□□□□□ -1.8
SSM4YIL030C FYV8P46949 817 aaKnown RBP3.78□□□□□ -1.8
SSM4YIL030C FMP33P46998 180 aa3.78□□□□□ -1.8
SSM4YIL030C BNI4P53858 892 aa3.78□□□□□ -1.8
SSM4YIL030C PFA5Q03289 374 aa3.78□□□□□ -1.8
SSM4YIL030C OYE2Q03558 400 aaKnown RBP3.78□□□□□ -1.8
SSM4YIL030C YLR287CQ05881 355 aa3.78□□□□□ -1.8
SSM4YIL030C ADY4Q05955 493 aa3.78□□□□□ -1.8
SSM4YIL030C SPO75Q07798 868 aa3.78□□□□□ -1.8
SSM4YIL030C TRM11Q12463 433 aa3.78□□□□□ -1.8
SSM4YIL030C ENT1Q12518 454 aa3.78□□□□□ -1.8
SSM4YIL030C TUB3P09734 445 aaKnown RBP3.78□□□□□ -1.8
SSM4YIL030C MRM1P25270 412 aa3.78□□□□□ -1.8
SSM4YIL030C PMI40P29952 429 aaKnown RBP3.78□□□□□ -1.8
SSM4YIL030C TGL1P34163 548 aa3.78□□□□□ -1.8
SSM4YIL030C CLG1P35190 452 aa3.78□□□□□ -1.8
SSM4YIL030C POL12P38121 705 aaPredicted RBP3.78□□□□□ -1.8
SSM4YIL030C MSR1P38714 643 aa3.78□□□□□ -1.8
SSM4YIL030C STB1P42845 420 aa3.78□□□□□ -1.8
SSM4YIL030C NAS6P50086 228 aa3.78□□□□□ -1.8
SSM4YIL030C ORC4P54791 529 aa3.78□□□□□ -1.8
SSM4YIL030C ATG13Q06628 738 aa3.78□□□□□ -1.8
SSM4YIL030C CDC37P06101 506 aaKnown RBP3.78□□□□□ -1.81
SSM4YIL030C MSD1P15179 658 aaKnown RBP3.78□□□□□ -1.81
SSM4YIL030C COY1P34237 679 aa3.78□□□□□ -1.81
SSM4YIL030C PFF1P38244 976 aa3.78□□□□□ -1.81
SSM4YIL030C YTA12P40341 825 aa3.78□□□□□ -1.81
SSM4YIL030C DIM1P41819 318 aaKnown RBP3.78□□□□□ -1.81
SSM4YIL030C YLR001CQ07895 862 aa3.78□□□□□ -1.81
SSM4YIL030C PHO8P11491 566 aa3.77□□□□□ -1.81
SSM4YIL030C MSB1P21339 1137 aaKnown RBP3.77□□□□□ -1.81
SSM4YIL030C AMD2P22580 549 aa3.77□□□□□ -1.81
SSM4YIL030C PSO2P30620 661 aa3.77□□□□□ -1.81
SSM4YIL030C GTT3P39996 337 aa3.77□□□□□ -1.81
SSM4YIL030C MND2P40577 368 aa3.77□□□□□ -1.81
SSM4YIL030C YJR054WP47114 497 aa3.77□□□□□ -1.81
SSM4YIL030C TOF1P53840 1238 aa3.77□□□□□ -1.81
SSM4YIL030C SCP160P06105 1222 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81 RIP-Chip
SSM4YIL030C HMG2P12684 1045 aa3.77□□□□□ -1.81
SSM4YIL030C FLO10P36170 1169 aa3.77□□□□□ -1.81
SSM4YIL030C YMC2P38087 329 aa3.77□□□□□ -1.81
SSM4YIL030C LIA1P47120 325 aaKnown RBP3.77□□□□□ -1.81
SSM4YIL030C MTC3P53077 123 aa3.77□□□□□ -1.81
SSM4YIL030C PTA1Q01329 785 aaPredicted RBP3.77□□□□□ -1.81
SSM4YIL030C GPI17Q04080 534 aa3.77□□□□□ -1.81
SSM4YIL030C TCP1P12612 559 aaKnown RBP3.77□□□□□ -1.81
SSM4YIL030C UGA1P17649 471 aa3.77□□□□□ -1.81
SSM4YIL030C PRE8P23639 250 aa3.77□□□□□ -1.81
SSM4YIL030C CDC20P26309 610 aa3.77□□□□□ -1.81
SSM4YIL030C PCS60P38137 543 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81 RIP-Chip
SSM4YIL030C AAD16Q02895 342 aa3.77□□□□□ -1.81
SSM4YIL030C ARO80Q04052 950 aa3.77□□□□□ -1.81
SSM4YIL030C TRS120Q04183 1289 aa3.77□□□□□ -1.81
SSM4YIL030C CUE5Q08412 411 aaKnown RBP3.77□□□□□ -1.81
SSM4YIL030C GCY1P14065 312 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms