RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W YOL073CQ08232 322 aa3.72□□□□□ -1.81
SSF1YHR066W YBR053CP38235 358 aa3.71□□□□□ -1.82
SSF1YHR066W MIP6P38760 659 aaKnown RBP3.71□□□□□ -1.82
SSF1YHR066W ELO3P40319 345 aa3.71□□□□□ -1.82
SSF1YHR066W MUP1P50276 574 aa3.71□□□□□ -1.82
SSF1YHR066W DLT1Q04216 342 aa3.71□□□□□ -1.82
SSF1YHR066W RPN7Q06103 429 aaKnown RBP3.71□□□□□ -1.82
SSF1YHR066W ALG7P07286 448 aa3.7□□□□□ -1.82
SSF1YHR066W CCR4P31384 837 aaKnown RBP3.7□□□□□ -1.82
SSF1YHR066W YKR018CP36114 725 aa3.7□□□□□ -1.82
SSF1YHR066W MGS1P40151 587 aa3.7□□□□□ -1.82
SSF1YHR066W ARP4P80428 489 aa3.7□□□□□ -1.82
SSF1YHR066W RNT1Q02555 471 aa3.7□□□□□ -1.82
SSF1YHR066W COG8Q04632 607 aa3.7□□□□□ -1.82
SSF1YHR066W FRE5Q08908 694 aa3.7□□□□□ -1.82
SSF1YHR066W GIN4Q12263 1142 aa3.7□□□□□ -1.82
SSF1YHR066W ADR1P07248 1323 aa3.69□□□□□ -1.82
SSF1YHR066W PPR1P07272 904 aaPredicted RBP3.69□□□□□ -1.82
SSF1YHR066W MET3P08536 511 aa3.69□□□□□ -1.82
SSF1YHR066W CAF20P12962 161 aaKnown RBP3.69□□□□□ -1.82
SSF1YHR066W ADE2P21264 571 aaKnown RBP3.69□□□□□ -1.82
SSF1YHR066W SFP1P32432 683 aa3.69□□□□□ -1.82
SSF1YHR066W YBR259WP38338 688 aa3.69□□□□□ -1.82
SSF1YHR066W YJR142WP47173 342 aa3.69□□□□□ -1.82
SSF1YHR066W PRP31P49704 494 aaPredicted RBP3.69□□□□□ -1.82
SSF1YHR066W PCL10P53124 433 aa3.69□□□□□ -1.82
SSF1YHR066W TEX1P53851 422 aaKnown RBP3.69□□□□□ -1.82
SSF1YHR066W UTP14Q04500 899 aaKnown RBP3.69□□□□□ -1.82
SSF1YHR066W URN1Q06525 465 aaKnown RBP3.69□□□□□ -1.82
SSF1YHR066W MNN4P36044 1178 aa3.68□□□□□ -1.82
SSF1YHR066W YHR112CP38716 378 aa3.68□□□□□ -1.82
SSF1YHR066W DOT6P40059 670 aaKnown RBP3.68□□□□□ -1.82
SSF1YHR066W HOS4P40480 1083 aa3.68□□□□□ -1.82
SSF1YHR066W YIR042CP40586 236 aa3.68□□□□□ -1.82
SSF1YHR066W AMA1P50082 593 aa3.68□□□□□ -1.82
SSF1YHR066W ORC4P54791 529 aa3.68□□□□□ -1.82
SSF1YHR066W CTF4Q01454 927 aa3.68□□□□□ -1.82
SSF1YHR066W LEE1Q02799 301 aaKnown RBP3.68□□□□□ -1.82
SSF1YHR066W ADY4Q05955 493 aa3.68□□□□□ -1.82
SSF1YHR066W LAT1P12695 482 aaKnown RBP3.67□□□□□ -1.82
SSF1YHR066W SPC42P36094 363 aa3.67□□□□□ -1.82
SSF1YHR066W ECM1P39715 212 aa3.67□□□□□ -1.82
SSF1YHR066W YJL163CP46996 555 aa3.67□□□□□ -1.82
SSF1YHR066W YBP2P53169 641 aa3.67□□□□□ -1.82
SSF1YHR066W SDA1P53313 767 aaKnown RBP3.67□□□□□ -1.82
SSF1YHR066W ARG5,6Q01217 863 aa3.67□□□□□ -1.82
SSF1YHR066W IRC13Q08630 104 aa3.67□□□□□ -1.82
SSF1YHR066W ERG6P25087 383 aaKnown RBP3.66□□□□□ -1.82
SSF1YHR066W APL2P36000 726 aaPredicted RBP3.66□□□□□ -1.82
SSF1YHR066W PPS1P38148 807 aa3.66□□□□□ -1.82
SSF1YHR066W FPR3P38911 411 aaKnown RBP3.66□□□□□ -1.82
SSF1YHR066W LYS9P38999 446 aa3.66□□□□□ -1.82
SSF1YHR066W GID8P40208 455 aa3.66□□□□□ -1.82
SSF1YHR066W BAP3P41815 604 aa3.66□□□□□ -1.82
SSF1YHR066W BRE5P53741 515 aaKnown RBP3.66□□□□□ -1.82
SSF1YHR066W DOS2P54858 310 aa3.66□□□□□ -1.82
SSF1YHR066W MUK1Q02866 612 aa3.66□□□□□ -1.82
SSF1YHR066W YMR206WQ03695 313 aa3.66□□□□□ -1.82
SSF1YHR066W GAD1Q04792 585 aa3.66□□□□□ -1.82
SSF1YHR066W GUD1Q07729 489 aa3.66□□□□□ -1.82
SSF1YHR066W DCS2Q12123 353 aa3.66□□□□□ -1.82
SSF1YHR066W SSZ1P38788 538 aaKnown RBP3.65□□□□□ -1.82
SSF1YHR066W HLJ1P48353 224 aa3.65□□□□□ -1.82
SSF1YHR066W MTL1P53214 551 aa3.65□□□□□ -1.82
SSF1YHR066W YNR029CP53729 429 aaKnown RBP3.65□□□□□ -1.82
SSF1YHR066W RGC1Q06108 1083 aaKnown RBP3.65□□□□□ -1.82
SSF1YHR066W MCM21Q06675 368 aa3.65□□□□□ -1.82
SSF1YHR066W THI73Q07904 523 aa3.65□□□□□ -1.82
SSF1YHR066W ATG11Q12527 1178 aa3.65□□□□□ -1.82
SSF1YHR066W YGR161W-CQ3E744 92 aa3.65□□□□□ -1.82
SSF1YHR066W HRP1Q99383 534 aaKnown RBP3.65□□□□□ -1.82
SSF1YHR066W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
SSF1YHR066W BRN1P38170 754 aa3.64□□□□□ -1.83
SSF1YHR066W MOH1P38191 138 aa3.64□□□□□ -1.83
SSF1YHR066W BCD1P38772 366 aa3.64□□□□□ -1.83
SSF1YHR066W YJR039WP47107 1121 aa3.64□□□□□ -1.83
SSF1YHR066W YJR096WP47137 282 aa3.64□□□□□ -1.83
SSF1YHR066W HMO1Q03973 246 aaKnown RBP3.64□□□□□ -1.83
SSF1YHR066W AKL1P38080 1108 aaKnown RBP3.63□□□□□ -1.83
SSF1YHR066W CKB2P38930 258 aa3.63□□□□□ -1.83
SSF1YHR066W GET2P40056 285 aa3.63□□□□□ -1.83
SSF1YHR066W SET2P46995 733 aaKnown RBP3.63□□□□□ -1.83
SSF1YHR066W STB4P50104 949 aa3.63□□□□□ -1.83
SSF1YHR066W UBC11P52492 156 aa3.63□□□□□ -1.83
SSF1YHR066W OMS1Q06668 471 aa3.63□□□□□ -1.83
SSF1YHR066W RNR1P21524 888 aaKnown RBP3.63□□□□□ -1.83
SSF1YHR066W HIR1P32479 840 aa3.63□□□□□ -1.83
SSF1YHR066W OAR1P35731 278 aa3.63□□□□□ -1.83
SSF1YHR066W TRZ1P36159 838 aaPredicted RBP3.63□□□□□ -1.83
SSF1YHR066W TYS1P36421 394 aaKnown RBP3.63□□□□□ -1.83
SSF1YHR066W CRP1P38845 465 aaKnown RBP3.63□□□□□ -1.83
SSF1YHR066W FMO1P38866 432 aa3.63□□□□□ -1.83
SSF1YHR066W NUG1P40010 520 aaKnown RBP3.63□□□□□ -1.83
SSF1YHR066W YNL195CP40168 261 aa3.63□□□□□ -1.83
SSF1YHR066W GPG1P53130 126 aa3.63□□□□□ -1.83
SSF1YHR066W REC102Q02721 264 aa3.63□□□□□ -1.83
SSF1YHR066W MTQ2Q03920 221 aaPredicted RBP3.63□□□□□ -1.83
SSF1YHR066W PYC1P11154 1178 aaKnown RBP3.62□□□□□ -1.83
SSF1YHR066W PRP19P32523 503 aaKnown RBP3.62□□□□□ -1.83
SSF1YHR066W HIS7P33734 552 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 47.3 ms