RNA–Protein interactions for RNA: YHL035C

VMR1, Transcript of Vacuolar membrane protein, yeastyeast

Gene VMR1, Length 4,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMR1YHL035C PTA1Q01329 785 aaPredicted RBP2.44□□□□□ -2.02
VMR1YHL035C RGA2Q06407 1009 aa2.44□□□□□ -2.02
VMR1YHL035C YOR352WQ08816 343 aa2.44□□□□□ -2.02
VMR1YHL035C FAP7Q12055 197 aaPredicted RBP2.44□□□□□ -2.02
VMR1YHL035C YIL108WP40483 696 aaKnown RBP2.44□□□□□ -2.02
VMR1YHL035C NPY1P53164 384 aa2.44□□□□□ -2.02
VMR1YHL035C GPD1Q00055 391 aaKnown RBP2.44□□□□□ -2.02
VMR1YHL035C PPN1Q04119 674 aa2.44□□□□□ -2.02
VMR1YHL035C VMS1Q04311 632 aaKnown RBP2.44□□□□□ -2.02
VMR1YHL035C RPN7Q06103 429 aaKnown RBP2.44□□□□□ -2.02
VMR1YHL035C KCS1Q12494 1050 aa2.44□□□□□ -2.02
VMR1YHL035C TUF1P02992 437 aaKnown RBP2.44□□□□□ -2.02
VMR1YHL035C RAD18P10862 487 aa2.44□□□□□ -2.02
VMR1YHL035C HEM12P32347 362 aaPredicted RBP2.44□□□□□ -2.02
VMR1YHL035C APT2P36973 181 aa2.44□□□□□ -2.02
VMR1YHL035C AKL1P38080 1108 aaKnown RBP2.44□□□□□ -2.02
VMR1YHL035C YLF2P38746 405 aa2.44□□□□□ -2.02
VMR1YHL035C VTS1Q08831 523 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
VMR1YHL035C TMA17Q12513 150 aa2.44□□□□□ -2.02
VMR1YHL035C PRC1P00729 532 aa2.44□□□□□ -2.02
VMR1YHL035C ENA1P13587 1091 aa2.44□□□□□ -2.02
VMR1YHL035C MF(ALPHA)2P32435 120 aa2.44□□□□□ -2.02
VMR1YHL035C SRP68P38687 599 aaKnown RBP2.44□□□□□ -2.02
VMR1YHL035C ORC4P54791 529 aa2.44□□□□□ -2.02
VMR1YHL035C ENA2Q01896 1091 aa2.44□□□□□ -2.02
VMR1YHL035C NPC2Q12408 173 aa2.44□□□□□ -2.02
VMR1YHL035C RMP1Q12530 201 aa2.44□□□□□ -2.02
VMR1YHL035C ENA5Q12691 1091 aa2.44□□□□□ -2.02
VMR1YHL035C SEC21P32074 935 aaKnown RBP2.43□□□□□ -2.02
VMR1YHL035C OMA1P36163 345 aa2.43□□□□□ -2.02
VMR1YHL035C PEA2P40091 420 aa2.43□□□□□ -2.02
VMR1YHL035C ATG36P46983 293 aa2.43□□□□□ -2.02
VMR1YHL035C SET2P46995 733 aaKnown RBP2.43□□□□□ -2.02
VMR1YHL035C SLU7Q02775 382 aaKnown RBP2.43□□□□□ -2.02
VMR1YHL035C MUS81Q04149 632 aaPredicted RBP2.43□□□□□ -2.02
VMR1YHL035C TRI1Q05024 226 aa2.43□□□□□ -2.02
VMR1YHL035C YLR224WQ05947 369 aa2.43□□□□□ -2.02
VMR1YHL035C RPS13P05756 151 aaKnown RBP2.43□□□□□ -2.02
VMR1YHL035C VPS24P36095 224 aaKnown RBP2.43□□□□□ -2.02
VMR1YHL035C APN2P38207 520 aa2.43□□□□□ -2.02
VMR1YHL035C DOT6P40059 670 aaKnown RBP2.43□□□□□ -2.02
VMR1YHL035C SLD3P53135 668 aa2.43□□□□□ -2.02
VMR1YHL035C SIR3P06701 978 aa2.43□□□□□ -2.02
VMR1YHL035C LAT1P12695 482 aaKnown RBP2.43□□□□□ -2.02
VMR1YHL035C HOP1P20050 605 aa2.43□□□□□ -2.02
VMR1YHL035C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
VMR1YHL035C TDA3P38758 523 aa2.43□□□□□ -2.02
VMR1YHL035C PZF1P39933 429 aa2.43□□□□□ -2.02
VMR1YHL035C SHR5P41912 237 aa2.43□□□□□ -2.02
VMR1YHL035C YGR153WP48238 217 aa2.43□□□□□ -2.02
VMR1YHL035C PSR2Q07949 397 aa2.43□□□□□ -2.02
VMR1YHL035C PRP22P24384 1145 aaKnown RBP2.42□□□□□ -2.02
VMR1YHL035C YCL002CP25565 263 aa2.42□□□□□ -2.02
VMR1YHL035C EMC1P25574 760 aa2.42□□□□□ -2.02
VMR1YHL035C YKR051WP36142 418 aa2.42□□□□□ -2.02
VMR1YHL035C BIT2P38346 545 aa2.42□□□□□ -2.02
VMR1YHL035C SSY5P47002 699 aa2.42□□□□□ -2.02
VMR1YHL035C SWM1Q12379 170 aa2.42□□□□□ -2.02
VMR1YHL035C NOP56Q12460 504 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
VMR1YHL035C PRP19P32523 503 aaKnown RBP2.42□□□□□ -2.02
VMR1YHL035C LRG1P35688 1017 aa2.42□□□□□ -2.02
VMR1YHL035C YFL052WP43551 465 aa2.42□□□□□ -2.02
VMR1YHL035C TGL2P54857 326 aa2.42□□□□□ -2.02
VMR1YHL035C CLU1Q03690 1277 aaKnown RBP2.42□□□□□ -2.02
VMR1YHL035C POL12P38121 705 aaPredicted RBP2.42□□□□□ -2.02
VMR1YHL035C PFA3P42836 336 aa2.42□□□□□ -2.02
VMR1YHL035C BIK1P11709 440 aa2.42□□□□□ -2.02
VMR1YHL035C LIP5P32875 414 aa2.42□□□□□ -2.02
VMR1YHL035C YIR042CP40586 236 aa2.42□□□□□ -2.02
VMR1YHL035C YBP2P53169 641 aa2.42□□□□□ -2.02
VMR1YHL035C PEF1P53238 335 aa2.42□□□□□ -2.02
VMR1YHL035C YAP1802P53309 568 aa2.42□□□□□ -2.02
VMR1YHL035C HOL1P53389 586 aa2.42□□□□□ -2.02
VMR1YHL035C BRE5P53741 515 aaKnown RBP2.42□□□□□ -2.02
VMR1YHL035C EIS1Q05050 843 aaKnown RBP2.42□□□□□ -2.02
VMR1YHL035C YOR022CQ12204 715 aa2.42□□□□□ -2.02
VMR1YHL035C VPS5Q92331 675 aa2.42□□□□□ -2.02
VMR1YHL035C LST4P34239 828 aa2.41□□□□□ -2.02
VMR1YHL035C IRC5P43610 853 aa2.41□□□□□ -2.02
VMR1YHL035C BUL1P48524 976 aa2.41□□□□□ -2.02
VMR1YHL035C RNR4P49723 345 aaKnown RBP2.41□□□□□ -2.02
VMR1YHL035C PKH1Q03407 766 aa2.41□□□□□ -2.02
VMR1YHL035C SSL1Q04673 461 aaPredicted RBP2.41□□□□□ -2.02
VMR1YHL035C MLC2Q06580 163 aa2.41□□□□□ -2.02
VMR1YHL035C KAR4P25583 335 aa2.41□□□□□ -2.02
VMR1YHL035C PMI40P29952 429 aaKnown RBP2.41□□□□□ -2.02
VMR1YHL035C RSC8P43609 557 aaKnown RBP2.41□□□□□ -2.02
VMR1YHL035C MTR3P48240 250 aaPredicted RBP2.41□□□□□ -2.02
VMR1YHL035C SPO1P53541 631 aa2.41□□□□□ -2.02
VMR1YHL035C ARP4P80428 489 aa2.41□□□□□ -2.02
VMR1YHL035C GSF2Q04697 403 aaKnown RBP2.41□□□□□ -2.02
VMR1YHL035C PRP28P23394 588 aa2.41□□□□□ -2.02
VMR1YHL035C PEX1P24004 1043 aa2.41□□□□□ -2.02
VMR1YHL035C PLC1P32383 869 aa2.41□□□□□ -2.02
VMR1YHL035C CCT3P39077 534 aaKnown RBP2.41□□□□□ -2.02
VMR1YHL035C CEP3P40969 608 aa2.41□□□□□ -2.02
VMR1YHL035C PEX14P53112 341 aa2.41□□□□□ -2.02
VMR1YHL035C NOP15P53927 220 aaPredicted RBP2.41□□□□□ -2.02
VMR1YHL035C YAP6Q03935 383 aa2.41□□□□□ -2.02
VMR1YHL035C DEF1P35732 738 aaKnown RBP2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms