RNA–Protein interactions for RNA: YGR167W

CLC1, Transcript of Clathrin light chain, yeast

Gene CLC1, Length 702 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLC1	YGR167W	YKR018C	P36114	725 aa		5.63	□□□□□ -1.51
CLC1	YGR167W	NRG1	Q03125	231 aa		5.63	□□□□□ -1.51
CLC1	YGR167W	TRM13	Q12383	476 aa		5.63	□□□□□ -1.51
CLC1	YGR167W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.62	□□□□□ -1.51	not detected
CLC1	YGR167W	PMI40	P29952	429 aa	Known RBP	5.62	□□□□□ -1.51
CLC1	YGR167W	SIC1	P38634	284 aa		5.62	□□□□□ -1.51
CLC1	YGR167W	MIP6	P38760	659 aa	Known RBP	5.62	□□□□□ -1.51
CLC1	YGR167W	YBP2	P53169	641 aa		5.62	□□□□□ -1.51
CLC1	YGR167W	ORC4	P54791	529 aa		5.62	□□□□□ -1.51
CLC1	YGR167W	TUB2	P02557	457 aa	Known RBP	5.61	□□□□□ -1.51
CLC1	YGR167W	ERG4	P25340	473 aa		5.61	□□□□□ -1.51
CLC1	YGR167W	MNN4	P36044	1178 aa		5.61	□□□□□ -1.51
CLC1	YGR167W	TYS1	P36421	394 aa	Known RBP	5.61	□□□□□ -1.51
CLC1	YGR167W	YBR259W	P38338	688 aa		5.61	□□□□□ -1.51
CLC1	YGR167W	PRP31	P49704	494 aa	Predicted RBP	5.61	□□□□□ -1.51
CLC1	YGR167W	PCL10	P53124	433 aa		5.61	□□□□□ -1.51
CLC1	YGR167W	SUN4	P53616	420 aa		5.61	□□□□□ -1.51
CLC1	YGR167W	ARP4	P80428	489 aa		5.61	□□□□□ -1.51
CLC1	YGR167W	TGL5	Q12043	749 aa		5.61	□□□□□ -1.51
CLC1	YGR167W	YJR096W	P47137	282 aa		5.6	□□□□□ -1.51
CLC1	YGR167W	PMT3	P47190	753 aa		5.6	□□□□□ -1.51
CLC1	YGR167W	KIN4	Q01919	800 aa		5.6	□□□□□ -1.51
CLC1	YGR167W	DLT1	Q04216	342 aa		5.6	□□□□□ -1.51
CLC1	YGR167W	NUP145	P49687	1317 aa		5.59	□□□□□ -1.51
CLC1	YGR167W	MET3	P08536	511 aa		5.59	□□□□□ -1.51
CLC1	YGR167W	KTR4	P38131	464 aa		5.59	□□□□□ -1.51
CLC1	YGR167W	CKB2	P38930	258 aa		5.59	□□□□□ -1.51
CLC1	YGR167W	MUP1	P50276	574 aa		5.59	□□□□□ -1.51
CLC1	YGR167W	LEE1	Q02799	301 aa	Known RBP	5.59	□□□□□ -1.51
CLC1	YGR167W	UME1	Q03010	460 aa		5.59	□□□□□ -1.51
CLC1	YGR167W	YLR040C	Q07988	224 aa		5.59	□□□□□ -1.51
CLC1	YGR167W	CAF20	P12962	161 aa	Known RBP	5.58	□□□□□ -1.52
CLC1	YGR167W	ADE2	P21264	571 aa	Known RBP	5.58	□□□□□ -1.52
CLC1	YGR167W	PRP19	P32523	503 aa	Known RBP	5.58	□□□□□ -1.52
CLC1	YGR167W	SUL1	P38359	859 aa		5.58	□□□□□ -1.52
CLC1	YGR167W	ELO3	P40319	345 aa		5.58	□□□□□ -1.52
CLC1	YGR167W	AIM21	P40563	679 aa		5.58	□□□□□ -1.52
CLC1	YGR167W	TEX1	P53851	422 aa	Known RBP	5.58	□□□□□ -1.52
CLC1	YGR167W	MTQ2	Q03920	221 aa	Predicted RBP	5.58	□□□□□ -1.52
CLC1	YGR167W	YHR112C	P38716	378 aa		5.57	□□□□□ -1.52
CLC1	YGR167W	UBP12	P39538	1254 aa		5.57	□□□□□ -1.52
CLC1	YGR167W	MSE1	P48525	536 aa		5.57	□□□□□ -1.52
CLC1	YGR167W	YGR237C	P50089	785 aa		5.57	□□□□□ -1.52
CLC1	YGR167W	GPG1	P53130	126 aa		5.57	□□□□□ -1.52
CLC1	YGR167W	BRE5	P53741	515 aa	Known RBP	5.57	□□□□□ -1.52
CLC1	YGR167W	ARG5,6	Q01217	863 aa		5.57	□□□□□ -1.52
CLC1	YGR167W	PUS9	Q12069	462 aa		5.57	□□□□□ -1.52
CLC1	YGR167W	YBR053C	P38235	358 aa		5.56	□□□□□ -1.52
CLC1	YGR167W	SSZ1	P38788	538 aa	Known RBP	5.56	□□□□□ -1.52
CLC1	YGR167W	AMA1	P50082	593 aa		5.56	□□□□□ -1.52
CLC1	YGR167W	RNT1	Q02555	471 aa		5.56	□□□□□ -1.52
CLC1	YGR167W	GAD1	Q04792	585 aa		5.56	□□□□□ -1.52
CLC1	YGR167W	FRE5	Q08908	694 aa		5.56	□□□□□ -1.52
CLC1	YGR167W	DCS2	Q12123	353 aa		5.56	□□□□□ -1.52
CLC1	YGR167W	ALG7	P07286	448 aa		5.55	□□□□□ -1.52
CLC1	YGR167W	LAT1	P12695	482 aa	Known RBP	5.55	□□□□□ -1.52
CLC1	YGR167W	APL2	P36000	726 aa	Predicted RBP	5.55	□□□□□ -1.52
CLC1	YGR167W	TDA3	P38758	523 aa		5.55	□□□□□ -1.52
CLC1	YGR167W	ECM1	P39715	212 aa		5.55	□□□□□ -1.52
CLC1	YGR167W	YIR042C	P40586	236 aa		5.55	□□□□□ -1.52
CLC1	YGR167W	YGL081W	P53156	320 aa		5.55	□□□□□ -1.52
CLC1	YGR167W	URN1	Q06525	465 aa	Known RBP	5.55	□□□□□ -1.52
CLC1	YGR167W	YOL073C	Q08232	322 aa		5.55	□□□□□ -1.52
CLC1	YGR167W	GRX4	P32642	244 aa		5.54	□□□□□ -1.52
CLC1	YGR167W	YEN1	P40028	759 aa		5.54	□□□□□ -1.52
CLC1	YGR167W	RET2	P43621	546 aa		5.54	□□□□□ -1.52
CLC1	YGR167W	YJR039W	P47107	1121 aa		5.54	□□□□□ -1.52
CLC1	YGR167W	GSF2	Q04697	403 aa	Known RBP	5.54	□□□□□ -1.52
CLC1	YGR167W	FAP7	Q12055	197 aa	Predicted RBP	5.54	□□□□□ -1.52
CLC1	YGR167W	TSR4	P25040	408 aa		5.53	□□□□□ -1.52
CLC1	YGR167W	ERG6	P25087	383 aa	Known RBP	5.53	□□□□□ -1.52
CLC1	YGR167W	APT2	P36973	181 aa		5.53	□□□□□ -1.52
CLC1	YGR167W	APN2	P38207	520 aa		5.53	□□□□□ -1.52
CLC1	YGR167W	HOS4	P40480	1083 aa		5.53	□□□□□ -1.52
CLC1	YGR167W	GPP1	P41277	250 aa	Known RBP	5.53	□□□□□ -1.52
CLC1	YGR167W	SET2	P46995	733 aa	Known RBP	5.53	□□□□□ -1.52
CLC1	YGR167W	HFD1	Q04458	532 aa		5.53	□□□□□ -1.52
CLC1	YGR167W	MCM21	Q06675	368 aa		5.53	□□□□□ -1.52
CLC1	YGR167W	ATG11	Q12527	1178 aa		5.53	□□□□□ -1.52
CLC1	YGR167W	PPR1	P07272	904 aa	Predicted RBP	5.52	□□□□□ -1.53
CLC1	YGR167W	TRZ1	P36159	838 aa	Predicted RBP	5.52	□□□□□ -1.53
CLC1	YGR167W	AKL1	P38080	1108 aa	Known RBP	5.52	□□□□□ -1.53
CLC1	YGR167W	MAL31	P38156	614 aa		5.52	□□□□□ -1.53
CLC1	YGR167W	YHR202W	P38887	602 aa		5.52	□□□□□ -1.53
CLC1	YGR167W	GID8	P40208	455 aa		5.52	□□□□□ -1.53
CLC1	YGR167W	YGR153W	P48238	217 aa		5.52	□□□□□ -1.53
CLC1	YGR167W	MTL1	P53214	551 aa		5.52	□□□□□ -1.53
CLC1	YGR167W	GPD1	Q00055	391 aa	Known RBP	5.52	□□□□□ -1.53
CLC1	YGR167W	REC102	Q02721	264 aa		5.52	□□□□□ -1.53
CLC1	YGR167W	ADY4	Q05955	493 aa		5.52	□□□□□ -1.53
CLC1	YGR167W	IRC13	Q08630	104 aa		5.52	□□□□□ -1.53
CLC1	YGR167W	CHS7	P38843	316 aa		5.51	□□□□□ -1.53
CLC1	YGR167W	NUG1	P40010	520 aa	Known RBP	5.51	□□□□□ -1.53
CLC1	YGR167W	BAP3	P41815	604 aa		5.51	□□□□□ -1.53
CLC1	YGR167W	YJL163C	P46996	555 aa		5.51	□□□□□ -1.53
CLC1	YGR167W	CTK1	Q03957	528 aa	Known RBP	5.51	□□□□□ -1.53
CLC1	YGR167W	YTM1	Q12024	460 aa	Predicted RBP	5.51	□□□□□ -1.53
CLC1	YGR167W	HRP1	Q99383	534 aa	Known RBP	5.51	□□□□□ -1.53
CLC1	YGR167W	PYC1	P11154	1178 aa	Known RBP	5.5	□□□□□ -1.53
CLC1	YGR167W	RNR1	P21524	888 aa	Known RBP	5.5	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms