RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W SEC21P32074 935 aaKnown RBP5.74□□□□□ -1.49
CDC43YGL155W VPS35P34110 944 aa5.74□□□□□ -1.49
CDC43YGL155W YKL050CP35736 922 aa5.74□□□□□ -1.49
CDC43YGL155W OAF3P36023 863 aa5.74□□□□□ -1.49
CDC43YGL155W YHL049CP38722 271 aa5.74□□□□□ -1.49
CDC43YGL155W YEL075CP39972 122 aa5.74□□□□□ -1.49
CDC43YGL155W LCP5P40079 357 aaPredicted RBP5.74□□□□□ -1.49
CDC43YGL155W YER189WP40104 122 aa5.74□□□□□ -1.49
CDC43YGL155W SAP185P40856 1058 aa5.74□□□□□ -1.49
CDC43YGL155W AAD14P42884 376 aa5.74□□□□□ -1.49
CDC43YGL155W YFL064CP43540 174 aa5.74□□□□□ -1.49
CDC43YGL155W CPR6P53691 371 aaKnown RBP5.74□□□□□ -1.49
CDC43YGL155W PHM6Q05637 104 aa5.74□□□□□ -1.49
CDC43YGL155W MRX10Q05648 414 aa5.74□□□□□ -1.49
CDC43YGL155W TAF10Q12030 206 aa5.74□□□□□ -1.49
CDC43YGL155W YBL111CQ3E7Y5 667 aa5.74□□□□□ -1.49
CDC43YGL155W PGK1P00560 416 aaKnown RBP5.73□□□□□ -1.49
CDC43YGL155W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
CDC43YGL155W STE6P12866 1290 aa5.73□□□□□ -1.49
CDC43YGL155W PRP16P15938 1071 aaPredicted RBP5.73□□□□□ -1.49
CDC43YGL155W SPO16P17122 198 aa5.73□□□□□ -1.49
CDC43YGL155W PRE10P21242 288 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
CDC43YGL155W UGA4P32837 571 aa5.73□□□□□ -1.49
CDC43YGL155W TFC4P33339 1025 aa5.73□□□□□ -1.49
CDC43YGL155W YKL023WP36103 277 aaKnown RBP5.73□□□□□ -1.49
CDC43YGL155W HIS2P38635 335 aa5.73□□□□□ -1.49
CDC43YGL155W SHC1P39000 512 aa5.73□□□□□ -1.49
CDC43YGL155W INA22P40576 216 aa5.73□□□□□ -1.49
CDC43YGL155W YNL320WP42840 284 aa5.73□□□□□ -1.49
CDC43YGL155W HUL5P53119 910 aa5.73□□□□□ -1.49
CDC43YGL155W LIF1P53150 421 aa5.73□□□□□ -1.49
CDC43YGL155W NCS2P53923 493 aaPredicted RBP5.73□□□□□ -1.49
CDC43YGL155W TIM8P57744 87 aa5.73□□□□□ -1.49
CDC43YGL155W UTP6Q02354 440 aaKnown RBP5.73□□□□□ -1.49
CDC43YGL155W DIG1Q03063 452 aaKnown RBP5.73□□□□□ -1.49
CDC43YGL155W MTG1Q03151 367 aaPredicted RBP5.73□□□□□ -1.49
CDC43YGL155W YMR187CQ03236 431 aa5.73□□□□□ -1.49
CDC43YGL155W DON1Q05610 365 aa5.73□□□□□ -1.49
CDC43YGL155W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
CDC43YGL155W SDH5Q08230 162 aa5.73□□□□□ -1.49
CDC43YGL155W FLO11P08640 1367 aa5.72□□□□□ -1.49
CDC43YGL155W TY1B-AO13527 1196 aaKnown RBP5.72□□□□□ -1.49
CDC43YGL155W ARG4P04076 463 aaPredicted RBP5.72□□□□□ -1.49
CDC43YGL155W CDC33P07260 213 aaKnown RBP5.72□□□□□ -1.49
CDC43YGL155W TCP1P12612 559 aaKnown RBP5.72□□□□□ -1.49
CDC43YGL155W DBP5P20449 482 aaKnown RBP5.72□□□□□ -1.49
CDC43YGL155W PRP22P24384 1145 aaKnown RBP5.72□□□□□ -1.49
CDC43YGL155W KIP1P28742 1111 aa5.72□□□□□ -1.49
CDC43YGL155W EUG1P32474 517 aa5.72□□□□□ -1.49
CDC43YGL155W SUV3P32580 737 aa5.72□□□□□ -1.49
CDC43YGL155W ATG19P35193 415 aa5.72□□□□□ -1.49
CDC43YGL155W TRZ1P36159 838 aaPredicted RBP5.72□□□□□ -1.49
CDC43YGL155W RRT2P38332 387 aa5.72□□□□□ -1.49
CDC43YGL155W TIF5P38431 405 aaKnown RBP5.72□□□□□ -1.49
CDC43YGL155W MRX1P40050 688 aa5.72□□□□□ -1.49
CDC43YGL155W RIO2P40160 425 aaKnown RBP5.72□□□□□ -1.49
CDC43YGL155W GPD2P41911 440 aaKnown RBP5.72□□□□□ -1.49
CDC43YGL155W MTC3P53077 123 aa5.72□□□□□ -1.49
CDC43YGL155W DIP5P53388 608 aa5.72□□□□□ -1.49
CDC43YGL155W ISU1Q03020 165 aa5.72□□□□□ -1.49
CDC43YGL155W YDR338CQ05497 695 aa5.72□□□□□ -1.49
CDC43YGL155W ISR1Q06098 443 aaKnown RBP5.72□□□□□ -1.49
CDC43YGL155W SUB2Q07478 446 aaKnown RBP5.72□□□□□ -1.49
CDC43YGL155W NCA2Q12374 616 aa5.72□□□□□ -1.49
CDC43YGL155W TUB2P02557 457 aaKnown RBP5.71□□□□□ -1.5
CDC43YGL155W PMR1P13586 950 aa5.71□□□□□ -1.5
CDC43YGL155W POL3P15436 1097 aa5.71□□□□□ -1.5
CDC43YGL155W PRP9P19736 530 aaKnown RBP5.71□□□□□ -1.5
CDC43YGL155W YCR051WP25631 222 aa5.71□□□□□ -1.5
CDC43YGL155W NAM7P30771 971 aaKnown RBP5.71□□□□□ -1.5
CDC43YGL155W DBF4P32325 704 aa5.71□□□□□ -1.5
CDC43YGL155W PLC1P32383 869 aa5.71□□□□□ -1.5
CDC43YGL155W RTG2P32608 588 aaKnown RBP5.71□□□□□ -1.5
CDC43YGL155W RAD5P32849 1169 aaPredicted RBP5.71□□□□□ -1.5
CDC43YGL155W PGM2P37012 569 aaKnown RBP5.71□□□□□ -1.5
CDC43YGL155W ECM2P38241 364 aaKnown RBP5.71□□□□□ -1.5
CDC43YGL155W EXO5P38289 585 aa5.71□□□□□ -1.5
CDC43YGL155W MMS21P38632 267 aa5.71□□□□□ -1.5
CDC43YGL155W SOH1P38633 127 aa5.71□□□□□ -1.5
CDC43YGL155W TIF4631P39935 952 aaKnown RBP5.71□□□□□ -1.5
CDC43YGL155W KAP123P40069 1113 aaKnown RBP5.71□□□□□ -1.5
CDC43YGL155W YER156CP40093 338 aaKnown RBP5.71□□□□□ -1.5
CDC43YGL155W YTA12P40341 825 aa5.71□□□□□ -1.5
CDC43YGL155W FIS1P40515 155 aa5.71□□□□□ -1.5
CDC43YGL155W ULP2P40537 1034 aaPredicted RBP5.71□□□□□ -1.5
CDC43YGL155W NUP85P46673 744 aa5.71□□□□□ -1.5
CDC43YGL155W URB2P47108 1174 aa5.71□□□□□ -1.5
CDC43YGL155W ILM1P47155 203 aa5.71□□□□□ -1.5
CDC43YGL155W ZPR1P53303 486 aaKnown RBP5.71□□□□□ -1.5
CDC43YGL155W ALD6P54115 500 aaKnown RBP5.71□□□□□ -1.5
CDC43YGL155W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5 RIP-Chip
CDC43YGL155W ATG16Q03818 150 aa5.71□□□□□ -1.5
CDC43YGL155W TDA9Q04545 1251 aa5.71□□□□□ -1.5
CDC43YGL155W ERV41Q04651 352 aa5.71□□□□□ -1.5
CDC43YGL155W PIG1Q06216 648 aa5.71□□□□□ -1.5
CDC43YGL155W RKM4Q12504 494 aa5.71□□□□□ -1.5
CDC43YGL155W SRF1Q12516 437 aa5.71□□□□□ -1.5
CDC43YGL155W PYC1P11154 1178 aaKnown RBP5.7□□□□□ -1.5
CDC43YGL155W PMS1P14242 873 aa5.7□□□□□ -1.5
CDC43YGL155W MRPL25P23369 157 aa5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms