RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C CCZ1P38273 704 aa3.03□□□□□ -1.92
PRE4YFR050C GPB2P39717 880 aa3.03□□□□□ -1.92
PRE4YFR050C PTI1P39927 425 aaPredicted RBP3.03□□□□□ -1.92
PRE4YFR050C ENT3P47160 408 aa3.03□□□□□ -1.92
PRE4YFR050C SNU71P53207 620 aaKnown RBP3.03□□□□□ -1.92
PRE4YFR050C NSE1Q07913 336 aa3.03□□□□□ -1.92
PRE4YFR050C RTT10Q08924 1013 aa3.03□□□□□ -1.92
PRE4YFR050C TMA46Q12000 345 aaKnown RBP3.03□□□□□ -1.92
PRE4YFR050C WRS1Q12109 432 aaKnown RBP3.03□□□□□ -1.92
PRE4YFR050C RPS14AP06367 137 aaKnown RBP3.02□□□□□ -1.93
PRE4YFR050C POX1P13711 748 aa3.02□□□□□ -1.93
PRE4YFR050C CDC48P25694 835 aaKnown RBP3.02□□□□□ -1.93
PRE4YFR050C KIP1P28742 1111 aa3.02□□□□□ -1.93
PRE4YFR050C YSC84P32793 468 aa3.02□□□□□ -1.93
PRE4YFR050C AIM26P32858 118 aa3.02□□□□□ -1.93
PRE4YFR050C CYM1P32898 989 aa3.02□□□□□ -1.93
PRE4YFR050C MDL2P33311 773 aa3.02□□□□□ -1.93
PRE4YFR050C COY1P34237 679 aa3.02□□□□□ -1.93
PRE4YFR050C MCM7P38132 845 aa3.02□□□□□ -1.93
PRE4YFR050C RPS14BP39516 138 aaKnown RBP3.02□□□□□ -1.93
PRE4YFR050C MAD1P40957 749 aa3.02□□□□□ -1.93
PRE4YFR050C CNN1P43618 361 aa3.02□□□□□ -1.93
PRE4YFR050C AVT1P47082 602 aa3.02□□□□□ -1.93
PRE4YFR050C SKY1Q03656 742 aa3.02□□□□□ -1.93
PRE4YFR050C MMR1Q06324 491 aa3.02□□□□□ -1.93
PRE4YFR050C YPL260WQ08977 551 aa3.02□□□□□ -1.93
PRE4YFR050C YRA1Q12159 226 aaKnown RBP3.02□□□□□ -1.93
PRE4YFR050C SPO21Q12411 609 aa3.02□□□□□ -1.93
PRE4YFR050C YLR422WQ06409 1932 aa3.01□□□□□ -1.93
PRE4YFR050C MSD1P15179 658 aaKnown RBP3.01□□□□□ -1.93
PRE4YFR050C CLN2P20438 545 aa3.01□□□□□ -1.93
PRE4YFR050C PER1P25625 357 aa3.01□□□□□ -1.93
PRE4YFR050C MGM1P32266 881 aa3.01□□□□□ -1.93
PRE4YFR050C MNR2P35724 969 aa3.01□□□□□ -1.93
PRE4YFR050C ESL2P36168 1195 aa3.01□□□□□ -1.93
PRE4YFR050C SEA4P38164 1038 aa3.01□□□□□ -1.93
PRE4YFR050C CCC2P38995 1004 aa3.01□□□□□ -1.93
PRE4YFR050C PEX7P39108 375 aa3.01□□□□□ -1.93
PRE4YFR050C YGL039WP53183 348 aaKnown RBP3.01□□□□□ -1.93
PRE4YFR050C TNA1P53322 534 aa3.01□□□□□ -1.93
PRE4YFR050C HOS3Q02959 697 aaKnown RBP3.01□□□□□ -1.93
PRE4YFR050C JIP5Q06214 492 aaPredicted RBP3.01□□□□□ -1.93
PRE4YFR050C RSB1Q08417 382 aa3.01□□□□□ -1.93
PRE4YFR050C DFG16Q99234 619 aa3.01□□□□□ -1.93
PRE4YFR050C SPS1P08458 490 aa3□□□□□ -1.93
PRE4YFR050C CDC34P14682 295 aa3□□□□□ -1.93
PRE4YFR050C SAM35P14693 329 aa3□□□□□ -1.93
PRE4YFR050C KRS1P15180 591 aaKnown RBP3□□□□□ -1.93
PRE4YFR050C DBP5P20449 482 aaKnown RBP3□□□□□ -1.93
PRE4YFR050C SRO9P25567 434 aaKnown RBP3□□□□□ -1.93
PRE4YFR050C MLS1P30952 554 aa3□□□□□ -1.93
PRE4YFR050C TIM23P32897 222 aa3□□□□□ -1.93
PRE4YFR050C RGD1P38339 666 aa3□□□□□ -1.93
PRE4YFR050C TOM71P38825 639 aaKnown RBP3□□□□□ -1.93
PRE4YFR050C HXT13P39924 564 aa3□□□□□ -1.93
PRE4YFR050C IOC3P43596 787 aa3□□□□□ -1.93
PRE4YFR050C ECL1P48235 211 aa3□□□□□ -1.93
PRE4YFR050C GNP1P48813 663 aa3□□□□□ -1.93
PRE4YFR050C CTR1P49573 406 aa3□□□□□ -1.93
PRE4YFR050C HNT2P49775 206 aa3□□□□□ -1.93
PRE4YFR050C HXT17P53631 564 aa3□□□□□ -1.93
PRE4YFR050C HXT15P54854 567 aa3□□□□□ -1.93
PRE4YFR050C FCP1Q03254 732 aa3□□□□□ -1.93
PRE4YFR050C SVF1Q05515 481 aa3□□□□□ -1.93
PRE4YFR050C AOS1Q06624 347 aa3□□□□□ -1.93
PRE4YFR050C SGF29P25554 259 aa2.99□□□□□ -1.93
PRE4YFR050C WBP1P33767 430 aaKnown RBP2.99□□□□□ -1.93
PRE4YFR050C RER2P35196 286 aa2.99□□□□□ -1.93
PRE4YFR050C LRG1P35688 1017 aa2.99□□□□□ -1.93
PRE4YFR050C YBL028CP38202 106 aa2.99□□□□□ -1.93
PRE4YFR050C GIP4P39732 760 aa2.99□□□□□ -1.93
PRE4YFR050C RPN3P40016 523 aaKnown RBP2.99□□□□□ -1.93
PRE4YFR050C TYW3P53177 273 aa2.99□□□□□ -1.93
PRE4YFR050C YNR061CP53747 219 aa2.99□□□□□ -1.93
PRE4YFR050C SPO20Q04359 397 aa2.99□□□□□ -1.93
PRE4YFR050C YOR352WQ08816 343 aa2.99□□□□□ -1.93
PRE4YFR050C YOR389WQ08912 624 aa2.99□□□□□ -1.93
PRE4YFR050C YPL278CQ08990 100 aa2.99□□□□□ -1.93
PRE4YFR050C RPP0P05317 312 aaKnown RBP2.98□□□□□ -1.93
PRE4YFR050C SPE2P21182 396 aa2.98□□□□□ -1.93
PRE4YFR050C GAS1P22146 559 aaKnown RBP2.98□□□□□ -1.93
PRE4YFR050C LYP1P32487 611 aa2.98□□□□□ -1.93
PRE4YFR050C RFS1P38234 210 aaKnown RBP2.98□□□□□ -1.93
PRE4YFR050C SNF7P39929 240 aaKnown RBP2.98□□□□□ -1.93
PRE4YFR050C GDE1Q02979 1223 aa2.98□□□□□ -1.93
PRE4YFR050C TIF35Q04067 274 aaKnown RBP2.98□□□□□ -1.93
PRE4YFR050C RSC58Q07979 502 aa2.98□□□□□ -1.93
PRE4YFR050C LPX1Q12405 387 aaKnown RBP2.98□□□□□ -1.93
PRE4YFR050C RIP1P08067 215 aa2.97□□□□□ -1.93
PRE4YFR050C YER152CP10356 443 aa2.97□□□□□ -1.93
PRE4YFR050C RPL4AP10664 362 aaKnown RBP2.97□□□□□ -1.93
PRE4YFR050C INO1P11986 533 aa2.97□□□□□ -1.93
PRE4YFR050C PEX1P24004 1043 aa2.97□□□□□ -1.93
PRE4YFR050C YKL107WP34251 309 aa2.97□□□□□ -1.93
PRE4YFR050C UME6P39001 836 aa2.97□□□□□ -1.93
PRE4YFR050C PIK1P39104 1066 aa2.97□□□□□ -1.93
PRE4YFR050C ALD5P40047 520 aaKnown RBP2.97□□□□□ -1.93
PRE4YFR050C IRC24P40580 263 aa2.97□□□□□ -1.93
PRE4YFR050C KRI1P42846 591 aaKnown RBP2.97□□□□□ -1.93
PRE4YFR050C DUG1P43616 481 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms