RNA–Protein interactions for RNA: YFR027W

ECO1, Transcript of Acetyltransferase, yeast

Gene ECO1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECO1	YFR027W	YGR283C	P53336	341 aa	Predicted RBP	3.81	□□□□□ -1.8
ECO1	YFR027W	PAP2	P53632	584 aa	Known RBP	3.81	□□□□□ -1.8
ECO1	YFR027W	SUB1	P54000	292 aa	Known RBP	3.81	□□□□□ -1.8
ECO1	YFR027W	SSL1	Q04673	461 aa	Predicted RBP	3.81	□□□□□ -1.8
ECO1	YFR027W	SML1	Q04964	104 aa		3.81	□□□□□ -1.8
ECO1	YFR027W	GGA1	Q06336	557 aa		3.81	□□□□□ -1.8
ECO1	YFR027W	ENB1	Q08299	606 aa		3.81	□□□□□ -1.8
ECO1	YFR027W	CLN1	P20437	546 aa		3.8	□□□□□ -1.8
ECO1	YFR027W	HCM1	P25364	564 aa		3.8	□□□□□ -1.8
ECO1	YFR027W	SED4	P25365	1065 aa		3.8	□□□□□ -1.8
ECO1	YFR027W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	3.8	□□□□□ -1.8	not detected
ECO1	YFR027W	CTF8	P38877	133 aa		3.8	□□□□□ -1.8
ECO1	YFR027W	SDP1	P40479	209 aa		3.8	□□□□□ -1.8
ECO1	YFR027W	YIL108W	P40483	696 aa	Known RBP	3.8	□□□□□ -1.8
ECO1	YFR027W	GYP8	P43570	497 aa		3.8	□□□□□ -1.8
ECO1	YFR027W	ALG2	P43636	503 aa		3.8	□□□□□ -1.8
ECO1	YFR027W	NIT3	P49954	291 aa		3.8	□□□□□ -1.8
ECO1	YFR027W	DAM1	P53267	343 aa		3.8	□□□□□ -1.8
ECO1	YFR027W	NOG2	P53742	486 aa	Known RBP	3.8	□□□□□ -1.8
ECO1	YFR027W	NFI1	Q12216	726 aa		3.8	□□□□□ -1.8
ECO1	YFR027W	NTO1	Q12311	748 aa		3.8	□□□□□ -1.8
ECO1	YFR027W	GLE1	Q12315	538 aa		3.8	□□□□□ -1.8
ECO1	YFR027W	SFI1	Q12369	946 aa		3.8	□□□□□ -1.8
ECO1	YFR027W	RVB2	Q12464	471 aa	Known RBP	3.8	□□□□□ -1.8
ECO1	YFR027W	MET5	P47169	1442 aa		3.79	□□□□□ -1.8
ECO1	YFR027W	YML133C	Q03099	1374 aa		3.79	□□□□□ -1.8
ECO1	YFR027W	YLL067C	Q07888	1374 aa		3.79	□□□□□ -1.8
ECO1	YFR027W	YLL066C	Q99208	1374 aa		3.79	□□□□□ -1.8
ECO1	YFR027W	RAD50	P12753	1312 aa		3.79	□□□□□ -1.8
ECO1	YFR027W	GCN2	P15442	1659 aa		3.79	□□□□□ -1.8
ECO1	YFR027W	SWI6	P09959	803 aa		3.79	□□□□□ -1.8
ECO1	YFR027W	THR4	P16120	514 aa	Known RBP	3.79	□□□□□ -1.8
ECO1	YFR027W	MSH1	P25846	959 aa		3.79	□□□□□ -1.8
ECO1	YFR027W	RPD3	P32561	433 aa		3.79	□□□□□ -1.8
ECO1	YFR027W	NPR3	P38742	1146 aa		3.79	□□□□□ -1.8
ECO1	YFR027W	PET100	P38958	111 aa		3.79	□□□□□ -1.8
ECO1	YFR027W	AIM20	P40451	204 aa		3.79	□□□□□ -1.8
ECO1	YFR027W	ATP25	Q03153	612 aa		3.79	□□□□□ -1.8
ECO1	YFR027W	YMR102C	Q03177	834 aa		3.79	□□□□□ -1.8
ECO1	YFR027W	ARR1	Q06596	294 aa		3.79	□□□□□ -1.8
ECO1	YFR027W	TY1B-DR4	Q07793	1604 aa		3.79	□□□□□ -1.8
ECO1	YFR027W	SUP35	P05453	685 aa	Known RBP	3.78	□□□□□ -1.8
ECO1	YFR027W	ARD1	P07347	238 aa	Predicted RBP	3.78	□□□□□ -1.8
ECO1	YFR027W	KAR4	P25583	335 aa		3.78	□□□□□ -1.8
ECO1	YFR027W	PMI40	P29952	429 aa	Known RBP	3.78	□□□□□ -1.8
ECO1	YFR027W	RAD16	P31244	790 aa		3.78	□□□□□ -1.8
ECO1	YFR027W	SPC29	P33419	253 aa		3.78	□□□□□ -1.8
ECO1	YFR027W	YPT53	P36019	220 aa		3.78	□□□□□ -1.8
ECO1	YFR027W	GDH3	P39708	457 aa		3.78	□□□□□ -1.8
ECO1	YFR027W	JJJ1	P53863	590 aa		3.78	□□□□□ -1.8
ECO1	YFR027W	SLU7	Q02775	382 aa	Known RBP	3.78	□□□□□ -1.8
ECO1	YFR027W	PDS5	Q04264	1277 aa		3.78	□□□□□ -1.8
ECO1	YFR027W	REH1	Q06709	432 aa		3.78	□□□□□ -1.8
ECO1	YFR027W	LAS17	Q12446	633 aa		3.78	□□□□□ -1.8
ECO1	YFR027W	PDR5	P33302	1511 aa	Known RBP	3.78	□□□□□ -1.8
ECO1	YFR027W	BPT1	P14772	1559 aa		3.77	□□□□□ -1.81
ECO1	YFR027W	SSK2	P53599	1579 aa		3.77	□□□□□ -1.81
ECO1	YFR027W	RPS9A	O13516	197 aa	Known RBP	3.77	□□□□□ -1.81
ECO1	YFR027W	TY1B-A	O13527	1196 aa	Known RBP	3.77	□□□□□ -1.81
ECO1	YFR027W	TUB2	P02557	457 aa	Known RBP	3.77	□□□□□ -1.81
ECO1	YFR027W	ERR1	P0CX10	437 aa		3.77	□□□□□ -1.81
ECO1	YFR027W	ERR2	P0CX11	437 aa		3.77	□□□□□ -1.81
ECO1	YFR027W	PET123	P17558	318 aa		3.77	□□□□□ -1.81
ECO1	YFR027W	MRPS28	P21771	286 aa		3.77	□□□□□ -1.81
ECO1	YFR027W	SEC14	P24280	304 aa	Known RBP	3.77	□□□□□ -1.81
ECO1	YFR027W	MRC1	P25588	1096 aa		3.77	□□□□□ -1.81
ECO1	YFR027W	PUP2	P32379	260 aa		3.77	□□□□□ -1.81
ECO1	YFR027W	TIM23	P32897	222 aa		3.77	□□□□□ -1.81
ECO1	YFR027W	TRM2	P33753	639 aa		3.77	□□□□□ -1.81
ECO1	YFR027W	MIC60	P36112	540 aa		3.77	□□□□□ -1.81
ECO1	YFR027W	EXO84	P38261	753 aa		3.77	□□□□□ -1.81
ECO1	YFR027W	VPS41	P38959	992 aa		3.77	□□□□□ -1.81
ECO1	YFR027W	PHO23	P50947	330 aa		3.77	□□□□□ -1.81
ECO1	YFR027W	MAL11	P53048	616 aa		3.77	□□□□□ -1.81
ECO1	YFR027W	IMH1	Q06704	911 aa	Known RBP	3.77	□□□□□ -1.81
ECO1	YFR027W	CFT2	Q12102	859 aa	Predicted RBP	3.77	□□□□□ -1.81
ECO1	YFR027W	YCF1	P39109	1515 aa	Known RBP	3.76	□□□□□ -1.81
ECO1	YFR027W	CIT2	P08679	460 aa		3.76	□□□□□ -1.81
ECO1	YFR027W	PFK1	P16861	987 aa	Known RBP	3.76	□□□□□ -1.81
ECO1	YFR027W	DAL7	P21826	554 aa		3.76	□□□□□ -1.81
ECO1	YFR027W	BRF1	P29056	596 aa		3.76	□□□□□ -1.81
ECO1	YFR027W	CYS3	P31373	394 aa	Known RBP	3.76	□□□□□ -1.81
ECO1	YFR027W	SEC21	P32074	935 aa	Known RBP	3.76	□□□□□ -1.81
ECO1	YFR027W	MPE1	P35728	441 aa	Known RBP	3.76	□□□□□ -1.81
ECO1	YFR027W	BRN1	P38170	754 aa		3.76	□□□□□ -1.81
ECO1	YFR027W	SAP1	P39955	897 aa	Known RBP	3.76	□□□□□ -1.81
ECO1	YFR027W	SEC9	P40357	651 aa		3.76	□□□□□ -1.81
ECO1	YFR027W	NUP82	P40368	713 aa		3.76	□□□□□ -1.81
ECO1	YFR027W	TY4A-J	P47023	414 aa		3.76	□□□□□ -1.81
ECO1	YFR027W	BUL1	P48524	976 aa		3.76	□□□□□ -1.81
ECO1	YFR027W	TAD1	P53065	400 aa		3.76	□□□□□ -1.81
ECO1	YFR027W	RCF1	Q03713	159 aa		3.76	□□□□□ -1.81
ECO1	YFR027W	PEX19	Q07418	342 aa		3.76	□□□□□ -1.81
ECO1	YFR027W	MET7	Q08645	548 aa		3.76	□□□□□ -1.81
ECO1	YFR027W	YLR125W	Q12138	136 aa		3.76	□□□□□ -1.81
ECO1	YFR027W	SNQ2	P32568	1501 aa	Known RBP	3.75	□□□□□ -1.81
ECO1	YFR027W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.75	□□□□□ -1.81	not detected
ECO1	YFR027W	TUB3	P09734	445 aa	Known RBP	3.75	□□□□□ -1.81
ECO1	YFR027W	DPH5	P32469	300 aa	Predicted RBP	3.75	□□□□□ -1.81
ECO1	YFR027W	OLA1	P38219	394 aa	Known RBP	3.75	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms