RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C MRX3P38172 270 aa6.88□□□□□ -1.31
YPT1YFL038C VHC1P38329 1120 aa6.88□□□□□ -1.31
YPT1YFL038C MSG5P38590 489 aa6.88□□□□□ -1.31
YPT1YFL038C FTR1P40088 404 aa6.88□□□□□ -1.31
YPT1YFL038C VPS53P47061 822 aa6.88□□□□□ -1.31
YPT1YFL038C UBP15P50101 1230 aa6.88□□□□□ -1.31
YPT1YFL038C SQS1P53866 767 aaKnown RBP6.88□□□□□ -1.31
YPT1YFL038C YAF9P53930 226 aa6.88□□□□□ -1.31
YPT1YFL038C YNL035CP53962 389 aaKnown RBP6.88□□□□□ -1.31
YPT1YFL038C TAF9Q05027 157 aa6.88□□□□□ -1.31
YPT1YFL038C FAR8Q05040 523 aa6.88□□□□□ -1.31
YPT1YFL038C RGA2Q06407 1009 aa6.88□□□□□ -1.31
YPT1YFL038C NOB1Q08444 459 aaKnown RBP6.88□□□□□ -1.31
YPT1YFL038C OSW2Q12202 724 aa6.88□□□□□ -1.31
YPT1YFL038C CDC19P00549 500 aaKnown RBP6.87□□□□□ -1.31
YPT1YFL038C DED1P06634 604 aaKnown RBP6.87□□□□□ -1.31
YPT1YFL038C GCR1P07261 785 aa6.87□□□□□ -1.31
YPT1YFL038C VMA2P16140 517 aaKnown RBP6.87□□□□□ -1.31
YPT1YFL038C EST1P17214 699 aaPredicted RBP6.87□□□□□ -1.31
YPT1YFL038C SRV2P17555 526 aaKnown RBP6.87□□□□□ -1.31
YPT1YFL038C RNR1P21524 888 aaKnown RBP6.87□□□□□ -1.31
YPT1YFL038C PUF4P25339 888 aaKnown RBP RIP-Chip data6.87□□□□□ -1.31not detected
YPT1YFL038C YDJ1P25491 409 aaKnown RBP6.87□□□□□ -1.31
YPT1YFL038C PDB1P32473 366 aaKnown RBP6.87□□□□□ -1.31
YPT1YFL038C PBP2P38151 413 aaKnown RBP RIP-Chip data6.87□□□□□ -1.31not detected
YPT1YFL038C DYS1P38791 387 aa6.87□□□□□ -1.31
YPT1YFL038C YEL025CP39991 1188 aa6.87□□□□□ -1.31
YPT1YFL038C YMR134WP40207 237 aa6.87□□□□□ -1.31
YPT1YFL038C TDA10P42938 290 aa6.87□□□□□ -1.31
YPT1YFL038C PUS2P53167 370 aa6.87□□□□□ -1.31
YPT1YFL038C DRN1P53255 507 aaKnown RBP6.87□□□□□ -1.31
YPT1YFL038C YGR125WP53273 1036 aa6.87□□□□□ -1.31
YPT1YFL038C ADA2Q02336 434 aa6.87□□□□□ -1.31
YPT1YFL038C TBF1Q02457 562 aa6.87□□□□□ -1.31
YPT1YFL038C STE20Q03497 939 aaKnown RBP6.87□□□□□ -1.31
YPT1YFL038C CMS1Q07897 291 aaKnown RBP6.87□□□□□ -1.31
YPT1YFL038C ACM1Q08981 209 aa6.87□□□□□ -1.31
YPT1YFL038C ERP3Q12403 225 aa6.87□□□□□ -1.31
YPT1YFL038C AI5_BETAQ9ZZX0 354 aa6.87□□□□□ -1.31
YPT1YFL038C BI2P03873 423 aa6.86□□□□□ -1.31
YPT1YFL038C BI4P03879 638 aa6.86□□□□□ -1.31
YPT1YFL038C RPL17AP05740 184 aaKnown RBP6.86□□□□□ -1.31
YPT1YFL038C ILV2P07342 687 aaKnown RBP6.86□□□□□ -1.31
YPT1YFL038C TUB3P09734 445 aaKnown RBP6.86□□□□□ -1.31
YPT1YFL038C PDR1P12383 1068 aa6.86□□□□□ -1.31
YPT1YFL038C HEM15P16622 393 aa6.86□□□□□ -1.31
YPT1YFL038C CBF1P17106 351 aa6.86□□□□□ -1.31
YPT1YFL038C KAR3P17119 729 aa6.86□□□□□ -1.31
YPT1YFL038C COX11P19516 300 aaKnown RBP6.86□□□□□ -1.31
YPT1YFL038C IME1P21190 360 aa6.86□□□□□ -1.31
YPT1YFL038C ARG1P22768 420 aa6.86□□□□□ -1.31
YPT1YFL038C KIP2P28743 706 aa6.86□□□□□ -1.31
YPT1YFL038C ABD1P32783 436 aaPredicted RBP6.86□□□□□ -1.31
YPT1YFL038C REG2P38232 338 aa6.86□□□□□ -1.31
YPT1YFL038C VPS29P38759 282 aa6.86□□□□□ -1.31
YPT1YFL038C SSP1P38871 571 aa6.86□□□□□ -1.31
YPT1YFL038C AIM21P40563 679 aa6.86□□□□□ -1.31
YPT1YFL038C RPL17BP46990 184 aaKnown RBP6.86□□□□□ -1.31
YPT1YFL038C DAS1P47005 663 aa6.86□□□□□ -1.31
YPT1YFL038C MDR1P53258 950 aa6.86□□□□□ -1.31
YPT1YFL038C YNL146WP53906 100 aa6.86□□□□□ -1.31
YPT1YFL038C SUB1P54000 292 aaKnown RBP6.86□□□□□ -1.31
YPT1YFL038C VPS16Q03308 798 aa6.86□□□□□ -1.31
YPT1YFL038C UFO1Q04511 668 aa6.86□□□□□ -1.31
YPT1YFL038C BI3Q9ZZW7 517 aa6.86□□□□□ -1.31
YPT1YFL038C MRPL25P23369 157 aa6.85□□□□□ -1.31
YPT1YFL038C RME1P32338 300 aaKnown RBP6.85□□□□□ -1.31
YPT1YFL038C DPH2P32461 534 aa6.85□□□□□ -1.31
YPT1YFL038C SET3P36124 751 aa6.85□□□□□ -1.31
YPT1YFL038C CCL1P37366 393 aa6.85□□□□□ -1.31
YPT1YFL038C HEK2P38199 381 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31not detected
YPT1YFL038C ATG36P46983 293 aa6.85□□□□□ -1.31
YPT1YFL038C NET1P47035 1189 aa6.85□□□□□ -1.31
YPT1YFL038C ASN1P49089 572 aaKnown RBP6.85□□□□□ -1.31
YPT1YFL038C ORC5P50874 479 aa6.85□□□□□ -1.31
YPT1YFL038C ATG1P53104 897 aa6.85□□□□□ -1.31
YPT1YFL038C SPC24Q04477 213 aa6.85□□□□□ -1.31
YPT1YFL038C IVY1Q04934 453 aa6.85□□□□□ -1.31
YPT1YFL038C ECM7Q06200 448 aa6.85□□□□□ -1.31
YPT1YFL038C TDA5Q06417 326 aaKnown RBP6.85□□□□□ -1.31
YPT1YFL038C MPC54Q08550 464 aa6.85□□□□□ -1.31
YPT1YFL038C ECM3Q99252 613 aa6.85□□□□□ -1.31
YPT1YFL038C JIP3O13555 125 aa6.84□□□□□ -1.31
YPT1YFL038C YER152CP10356 443 aa6.84□□□□□ -1.31
YPT1YFL038C GAL11P19659 1081 aa6.84□□□□□ -1.31
YPT1YFL038C AEP2P22136 580 aa6.84□□□□□ -1.31
YPT1YFL038C GPI10P30777 616 aa6.84□□□□□ -1.31
YPT1YFL038C EFT1P32324 842 aaKnown RBP6.84□□□□□ -1.31
YPT1YFL038C CBF2P32504 956 aa6.84□□□□□ -1.31
YPT1YFL038C TMT1P32643 299 aa6.84□□□□□ -1.31
YPT1YFL038C TRM2P33753 639 aa6.84□□□□□ -1.31
YPT1YFL038C DBP7P36120 742 aaKnown RBP6.84□□□□□ -1.31
YPT1YFL038C YBR062CP38239 180 aa6.84□□□□□ -1.31
YPT1YFL038C POP4P38336 279 aa6.84□□□□□ -1.31
YPT1YFL038C PCA1P38360 1216 aa6.84□□□□□ -1.31
YPT1YFL038C EAF5P39995 279 aa6.84□□□□□ -1.31
YPT1YFL038C PEA2P40091 420 aa6.84□□□□□ -1.31
YPT1YFL038C INP52P50942 1183 aa6.84□□□□□ -1.31
YPT1YFL038C CUL3P53202 744 aa6.84□□□□□ -1.31
YPT1YFL038C SXM1Q04175 944 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms