RNA–Protein interactions for RNA: YFL002W-B

YFL002W-B, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YFL002W-B, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFL002W-BYFL002W-B YBR053CP38235 358 aa4.4□□□□□ -1.71
YFL002W-BYFL002W-B PCM1P38628 557 aaKnown RBP4.4□□□□□ -1.71
YFL002W-BYFL002W-B CHS7P38843 316 aa4.4□□□□□ -1.71
YFL002W-BYFL002W-B ADE2P21264 571 aaKnown RBP4.39□□□□□ -1.71
YFL002W-BYFL002W-B ERG6P25087 383 aaKnown RBP4.39□□□□□ -1.71
YFL002W-BYFL002W-B SIC1P38634 284 aa4.39□□□□□ -1.71
YFL002W-BYFL002W-B DOT6P40059 670 aaKnown RBP4.39□□□□□ -1.71
YFL002W-BYFL002W-B DLT1Q04216 342 aa4.39□□□□□ -1.71
YFL002W-BYFL002W-B FRE5Q08908 694 aa4.39□□□□□ -1.71
YFL002W-BYFL002W-B PNS1Q12412 539 aa4.39□□□□□ -1.71
YFL002W-BYFL002W-B MET3P08536 511 aa4.38□□□□□ -1.71
YFL002W-BYFL002W-B CAF20P12962 161 aaKnown RBP4.38□□□□□ -1.71
YFL002W-BYFL002W-B MNN4P36044 1178 aa4.38□□□□□ -1.71
YFL002W-BYFL002W-B PPS1P38148 807 aa4.38□□□□□ -1.71
YFL002W-BYFL002W-B HSL7P38274 827 aa4.38□□□□□ -1.71
YFL002W-BYFL002W-B PRP31P49704 494 aaPredicted RBP4.38□□□□□ -1.71
YFL002W-BYFL002W-B TEX1P53851 422 aaKnown RBP4.38□□□□□ -1.71
YFL002W-BYFL002W-B IRC13Q08630 104 aa4.38□□□□□ -1.71
YFL002W-BYFL002W-B GIN4Q12263 1142 aa4.38□□□□□ -1.71
YFL002W-BYFL002W-B SFP1P32432 683 aa4.37□□□□□ -1.71
YFL002W-BYFL002W-B KTR4P38131 464 aa4.37□□□□□ -1.71
YFL002W-BYFL002W-B YHR112CP38716 378 aa4.37□□□□□ -1.71
YFL002W-BYFL002W-B YNL195CP40168 261 aa4.37□□□□□ -1.71
YFL002W-BYFL002W-B MTL1P53214 551 aa4.37□□□□□ -1.71
YFL002W-BYFL002W-B SDA1P53313 767 aaKnown RBP4.37□□□□□ -1.71
YFL002W-BYFL002W-B RNT1Q02555 471 aa4.37□□□□□ -1.71
YFL002W-BYFL002W-B PPR1P07272 904 aaPredicted RBP4.36□□□□□ -1.71
YFL002W-BYFL002W-B SSD1P24276 1250 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
YFL002W-BYFL002W-B CCR4P31384 837 aaKnown RBP4.36□□□□□ -1.71
YFL002W-BYFL002W-B NGG1P32494 702 aa4.36□□□□□ -1.71
YFL002W-BYFL002W-B MIP6P38760 659 aaKnown RBP4.36□□□□□ -1.71
YFL002W-BYFL002W-B HOS4P40480 1083 aa4.36□□□□□ -1.71
YFL002W-BYFL002W-B ORC4P54791 529 aa4.36□□□□□ -1.71
YFL002W-BYFL002W-B GSF2Q04697 403 aaKnown RBP4.36□□□□□ -1.71
YFL002W-BYFL002W-B LYS9P38999 446 aa4.35□□□□□ -1.71
YFL002W-BYFL002W-B YJL163CP46996 555 aa4.35□□□□□ -1.71
YFL002W-BYFL002W-B HLJ1P48353 224 aa4.35□□□□□ -1.71
YFL002W-BYFL002W-B PCL10P53124 433 aa4.35□□□□□ -1.71
YFL002W-BYFL002W-B YBP2P53169 641 aa4.35□□□□□ -1.71
YFL002W-BYFL002W-B BRE5P53741 515 aaKnown RBP4.35□□□□□ -1.71
YFL002W-BYFL002W-B GUD1Q07729 489 aa4.35□□□□□ -1.71
YFL002W-BYFL002W-B HIS7P33734 552 aaKnown RBP4.34□□□□□ -1.71
YFL002W-BYFL002W-B SPC42P36094 363 aa4.34□□□□□ -1.71
YFL002W-BYFL002W-B YKR018CP36114 725 aa4.34□□□□□ -1.71
YFL002W-BYFL002W-B YBR259WP38338 688 aa4.34□□□□□ -1.71
YFL002W-BYFL002W-B MGS1P40151 587 aa4.34□□□□□ -1.71
YFL002W-BYFL002W-B YIR042CP40586 236 aa4.34□□□□□ -1.71
YFL002W-BYFL002W-B STB4P50104 949 aa4.34□□□□□ -1.71
YFL002W-BYFL002W-B GAD1Q04792 585 aa4.34□□□□□ -1.71
YFL002W-BYFL002W-B ADY4Q05955 493 aa4.34□□□□□ -1.71
YFL002W-BYFL002W-B DCS2Q12123 353 aa4.34□□□□□ -1.71
YFL002W-BYFL002W-B HRP1Q99383 534 aaKnown RBP4.34□□□□□ -1.71
YFL002W-BYFL002W-B BCD1P38772 366 aa4.33□□□□□ -1.72
YFL002W-BYFL002W-B YJR096WP47137 282 aa4.33□□□□□ -1.72
YFL002W-BYFL002W-B ARG5,6Q01217 863 aa4.33□□□□□ -1.72
YFL002W-BYFL002W-B CTF4Q01454 927 aa4.33□□□□□ -1.72
YFL002W-BYFL002W-B THI73Q07904 523 aa4.33□□□□□ -1.72
YFL002W-BYFL002W-B ECM3Q99252 613 aa4.33□□□□□ -1.72
YFL002W-BYFL002W-B TYS1P36421 394 aaKnown RBP4.32□□□□□ -1.72
YFL002W-BYFL002W-B MOH1P38191 138 aa4.32□□□□□ -1.72
YFL002W-BYFL002W-B FMO1P38866 432 aa4.32□□□□□ -1.72
YFL002W-BYFL002W-B GET2P40056 285 aa4.32□□□□□ -1.72
YFL002W-BYFL002W-B COX18P53239 316 aa4.32□□□□□ -1.72
YFL002W-BYFL002W-B YGR161W-CQ3E744 92 aa4.32□□□□□ -1.72
YFL002W-BYFL002W-B LAT1P12695 482 aaKnown RBP4.31□□□□□ -1.72
YFL002W-BYFL002W-B PRP19P32523 503 aaKnown RBP4.31□□□□□ -1.72
YFL002W-BYFL002W-B YEL1P34225 687 aa4.31□□□□□ -1.72
YFL002W-BYFL002W-B BRN1P38170 754 aa4.31□□□□□ -1.72
YFL002W-BYFL002W-B HRB1P38922 454 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
YFL002W-BYFL002W-B NUG1P40010 520 aaKnown RBP4.31□□□□□ -1.72
YFL002W-BYFL002W-B AMA1P50082 593 aa4.31□□□□□ -1.72
YFL002W-BYFL002W-B YNR029CP53729 429 aaKnown RBP4.31□□□□□ -1.72
YFL002W-BYFL002W-B RNR1P21524 888 aaKnown RBP4.3□□□□□ -1.72
YFL002W-BYFL002W-B APL2P36000 726 aaPredicted RBP4.3□□□□□ -1.72
YFL002W-BYFL002W-B CRP1P38845 465 aaKnown RBP4.3□□□□□ -1.72
YFL002W-BYFL002W-B YHR202WP38887 602 aa4.3□□□□□ -1.72
YFL002W-BYFL002W-B GPG1P53130 126 aa4.3□□□□□ -1.72
YFL002W-BYFL002W-B MVD1P32377 396 aaKnown RBP4.29□□□□□ -1.72
YFL002W-BYFL002W-B HIR1P32479 840 aa4.29□□□□□ -1.72
YFL002W-BYFL002W-B SSZ1P38788 538 aaKnown RBP4.29□□□□□ -1.72
YFL002W-BYFL002W-B PCL5P38794 229 aa4.29□□□□□ -1.72
YFL002W-BYFL002W-B SFB3P38810 929 aa4.29□□□□□ -1.72
YFL002W-BYFL002W-B SET2P46995 733 aaKnown RBP4.29□□□□□ -1.72
YFL002W-BYFL002W-B UBC11P52492 156 aa4.29□□□□□ -1.72
YFL002W-BYFL002W-B MTQ2Q03920 221 aaPredicted RBP4.29□□□□□ -1.72
YFL002W-BYFL002W-B ISA1Q07821 250 aaPredicted RBP4.29□□□□□ -1.72
YFL002W-BYFL002W-B RPS21BQ3E754 87 aaKnown RBP4.29□□□□□ -1.72
YFL002W-BYFL002W-B NUP145P49687 1317 aa4.29□□□□□ -1.72
YFL002W-BYFL002W-B PYC1P11154 1178 aaKnown RBP4.28□□□□□ -1.72
YFL002W-BYFL002W-B AKL1P38080 1108 aaKnown RBP4.28□□□□□ -1.72
YFL002W-BYFL002W-B BAP3P41815 604 aa4.28□□□□□ -1.72
YFL002W-BYFL002W-B YJR039WP47107 1121 aa4.28□□□□□ -1.72
YFL002W-BYFL002W-B PAN2P53010 1115 aaPredicted RBP4.28□□□□□ -1.72
YFL002W-BYFL002W-B UME1Q03010 460 aa4.28□□□□□ -1.72
YFL002W-BYFL002W-B UTP14Q04500 899 aaKnown RBP4.28□□□□□ -1.72
YFL002W-BYFL002W-B COG8Q04632 607 aa4.28□□□□□ -1.72
YFL002W-BYFL002W-B MCM21Q06675 368 aa4.28□□□□□ -1.72
YFL002W-BYFL002W-B VPS36Q06696 566 aa4.28□□□□□ -1.72
YFL002W-BYFL002W-B IMG2P25642 146 aaPredicted RBP4.27□□□□□ -1.73
YFL002W-BYFL002W-B OAR1P35731 278 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms