RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W NAT1P12945 854 aaKnown RBP8.36□□□□□ -1.07
SHC1YER096W COX11P19516 300 aaKnown RBP8.36□□□□□ -1.07
SHC1YER096W DRE2P36152 348 aa8.36□□□□□ -1.07
SHC1YER096W REI1P38344 393 aaPredicted RBP8.36□□□□□ -1.07
SHC1YER096W BUD16P39988 312 aa8.36□□□□□ -1.07
SHC1YER096W SBE2P42223 864 aaKnown RBP8.36□□□□□ -1.07
SHC1YER096W PHO86P46956 311 aa8.36□□□□□ -1.07
SHC1YER096W TSR1Q07381 788 aaKnown RBP8.36□□□□□ -1.07
SHC1YER096W YDR524C-BQ3E6R4 66 aa8.36□□□□□ -1.07
SHC1YER096W RRN6P32786 894 aa8.35□□□□□ -1.07
SHC1YER096W TRM2P33753 639 aa8.35□□□□□ -1.07
SHC1YER096W NCL1P38205 684 aaKnown RBP8.35□□□□□ -1.07
SHC1YER096W DYS1P38791 387 aa8.35□□□□□ -1.07
SHC1YER096W NDC80P40460 691 aa8.35□□□□□ -1.07
SHC1YER096W KAP114P53067 1004 aa8.35□□□□□ -1.07
SHC1YER096W PUS2P53167 370 aa8.35□□□□□ -1.07
SHC1YER096W SYH1Q02875 849 aaKnown RBP8.35□□□□□ -1.07
SHC1YER096W RRB1Q04225 511 aaKnown RBP8.35□□□□□ -1.07
SHC1YER096W SNF1P06782 633 aaKnown RBP8.34□□□□□ -1.07
SHC1YER096W DPB3P27344 201 aa8.34□□□□□ -1.07
SHC1YER096W SRB4P32569 687 aa8.34□□□□□ -1.07
SHC1YER096W YAP1801P38856 637 aa8.34□□□□□ -1.07
SHC1YER096W SAH1P39954 449 aaKnown RBP8.34□□□□□ -1.07
SHC1YER096W YTA12P40341 825 aa8.34□□□□□ -1.07
SHC1YER096W LAM5P43560 674 aa8.34□□□□□ -1.07
SHC1YER096W ASG7P46993 209 aa8.34□□□□□ -1.07
SHC1YER096W YMR1P47147 688 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
SHC1YER096W SGM1P47166 707 aa8.34□□□□□ -1.07
SHC1YER096W BRO1P48582 844 aa8.34□□□□□ -1.07
SHC1YER096W YNL115CP53925 644 aa8.34□□□□□ -1.07
SHC1YER096W STE20Q03497 939 aaKnown RBP8.34□□□□□ -1.07
SHC1YER096W GYL1Q04322 720 aa8.34□□□□□ -1.07
SHC1YER096W YMR114CQ04471 368 aaKnown RBP8.34□□□□□ -1.07
SHC1YER096W SFI1Q12369 946 aa8.34□□□□□ -1.07
SHC1YER096W PCD1Q12524 340 aa8.34□□□□□ -1.07
SHC1YER096W POT1P27796 417 aaKnown RBP RIP-Chip data8.34□□□□□ -1.08not detected
SHC1YER096W SEC21P32074 935 aaKnown RBP8.34□□□□□ -1.08
SHC1YER096W PAM1P37304 830 aaKnown RBP8.34□□□□□ -1.08
SHC1YER096W AGP2P38090 596 aa8.34□□□□□ -1.08
SHC1YER096W RCK2P38623 610 aa8.34□□□□□ -1.08
SHC1YER096W YHR054CP38780 354 aa8.34□□□□□ -1.08
SHC1YER096W GCV2P49095 1034 aa8.34□□□□□ -1.08
SHC1YER096W PRP31P49704 494 aaPredicted RBP8.34□□□□□ -1.08
SHC1YER096W STB4P50104 949 aa8.34□□□□□ -1.08
SHC1YER096W DRN1P53255 507 aaKnown RBP8.34□□□□□ -1.08
SHC1YER096W ALG11P53954 548 aaKnown RBP8.34□□□□□ -1.08
SHC1YER096W VPS60Q03390 229 aa8.34□□□□□ -1.08
SHC1YER096W YMR018WQ04364 514 aa8.34□□□□□ -1.08
SHC1YER096W POB3Q04636 552 aaKnown RBP8.34□□□□□ -1.08
SHC1YER096W SGT2Q12118 346 aaKnown RBP8.34□□□□□ -1.08
SHC1YER096W YOR022CQ12204 715 aa8.34□□□□□ -1.08
SHC1YER096W OSH2Q12451 1283 aa8.34□□□□□ -1.08
SHC1YER096W UBR2Q07963 1872 aa8.33□□□□□ -1.08
SHC1YER096W BI2P03873 423 aa8.33□□□□□ -1.08
SHC1YER096W BI4P03879 638 aa8.33□□□□□ -1.08
SHC1YER096W GAL10P04397 699 aa8.33□□□□□ -1.08
SHC1YER096W GYP6P32806 458 aa8.33□□□□□ -1.08
SHC1YER096W LDH1P38139 375 aa8.33□□□□□ -1.08
SHC1YER096W YEL075CP39972 122 aa8.33□□□□□ -1.08
SHC1YER096W EEB1Q02891 456 aa8.33□□□□□ -1.08
SHC1YER096W CWC21Q03375 135 aaKnown RBP8.33□□□□□ -1.08
SHC1YER096W PUS1Q12211 544 aaKnown RBP8.33□□□□□ -1.08
SHC1YER096W RMP1Q12530 201 aa8.33□□□□□ -1.08
SHC1YER096W BI3Q9ZZW7 517 aa8.33□□□□□ -1.08
SHC1YER096W RPS3P05750 240 aaKnown RBP8.32□□□□□ -1.08
SHC1YER096W CHS1P08004 1131 aa8.32□□□□□ -1.08
SHC1YER096W CAP1P28495 268 aaKnown RBP8.32□□□□□ -1.08
SHC1YER096W CBR1P38626 284 aaKnown RBP8.32□□□□□ -1.08
SHC1YER096W ALD5P40047 520 aaKnown RBP8.32□□□□□ -1.08
SHC1YER096W YGR111WP53265 400 aa8.32□□□□□ -1.08
SHC1YER096W YLR455WQ06188 304 aa8.32□□□□□ -1.08
SHC1YER096W CTF3Q12748 733 aa8.32□□□□□ -1.08
SHC1YER096W SAT4P25333 603 aaKnown RBP8.31□□□□□ -1.08
SHC1YER096W BLI1P35727 113 aa8.31□□□□□ -1.08
SHC1YER096W HIS2P38635 335 aa8.31□□□□□ -1.08
SHC1YER096W YHL026CP38740 315 aa8.31□□□□□ -1.08
SHC1YER096W ASG1P40467 964 aa8.31□□□□□ -1.08
SHC1YER096W ALT1P52893 592 aa8.31□□□□□ -1.08
SHC1YER096W CWC22P53333 577 aaKnown RBP8.31□□□□□ -1.08
SHC1YER096W MAL13P53338 473 aa8.31□□□□□ -1.08
SHC1YER096W URH1Q04179 340 aa8.31□□□□□ -1.08
SHC1YER096W YPR027CQ12079 277 aa8.31□□□□□ -1.08
SHC1YER096W NOP14Q99207 810 aaKnown RBP8.31□□□□□ -1.08
SHC1YER096W EST1P17214 699 aaPredicted RBP8.3□□□□□ -1.08
SHC1YER096W CAD1P24813 409 aaKnown RBP8.3□□□□□ -1.08
SHC1YER096W CSE2P33308 149 aa8.3□□□□□ -1.08
SHC1YER096W RRT2P38332 387 aa8.3□□□□□ -1.08
SHC1YER096W LCP5P40079 357 aaPredicted RBP8.3□□□□□ -1.08
SHC1YER096W YGL036WP53185 909 aaPredicted RBP8.3□□□□□ -1.08
SHC1YER096W YNL134CP53912 376 aaKnown RBP8.3□□□□□ -1.08
SHC1YER096W ATG23Q06671 453 aa8.3□□□□□ -1.08
SHC1YER096W YLR422WQ06409 1932 aa8.3□□□□□ -1.08
SHC1YER096W KAR3P17119 729 aa8.29□□□□□ -1.08
SHC1YER096W YEL043WP32618 956 aa8.29□□□□□ -1.08
SHC1YER096W MRP4P32902 394 aa8.29□□□□□ -1.08
SHC1YER096W HEL1P36113 551 aa8.29□□□□□ -1.08
SHC1YER096W KAP123P40069 1113 aaKnown RBP8.29□□□□□ -1.08
SHC1YER096W ISM1P48526 1002 aa8.29□□□□□ -1.08
SHC1YER096W RIM8P53179 542 aa8.29□□□□□ -1.08
SHC1YER096W GPD1Q00055 391 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 92.9 ms