RNA–Protein interactions for RNA: YEL021W

URA3, Transcript of Orotidine-5'-phosphate (OMP) decarboxylase, yeast

Gene URA3, Length 804 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URA3	YEL021W	RPC53	P25441	422 aa		5.7	□□□□□ -1.5
URA3	YEL021W	SMY1	P32364	656 aa	Known RBP	5.7	□□□□□ -1.5
URA3	YEL021W	CBF2	P32504	956 aa		5.7	□□□□□ -1.5
URA3	YEL021W	TYS1	P36421	394 aa	Known RBP	5.7	□□□□□ -1.5
URA3	YEL021W	BAP2	P38084	609 aa		5.7	□□□□□ -1.5
URA3	YEL021W	YHR131C	P38835	850 aa		5.7	□□□□□ -1.5
URA3	YEL021W	GEM1	P39722	662 aa		5.7	□□□□□ -1.5
URA3	YEL021W	YER034W	P40022	185 aa	Known RBP	5.7	□□□□□ -1.5
URA3	YEL021W	FMP10	P40098	244 aa		5.7	□□□□□ -1.5
URA3	YEL021W	PCL7	P40186	285 aa		5.7	□□□□□ -1.5
URA3	YEL021W	HIS6	P40545	261 aa		5.7	□□□□□ -1.5
URA3	YEL021W	OYE3	P41816	400 aa	Predicted RBP	5.7	□□□□□ -1.5
URA3	YEL021W	SLS1	P42900	643 aa		5.7	□□□□□ -1.5
URA3	YEL021W	SAP155	P43612	1002 aa		5.7	□□□□□ -1.5
URA3	YEL021W	IRC6	P43615	237 aa		5.7	□□□□□ -1.5
URA3	YEL021W	IML2	P47031	731 aa		5.7	□□□□□ -1.5
URA3	YEL021W	RNR4	P49723	345 aa	Known RBP	5.7	□□□□□ -1.5
URA3	YEL021W	YGR045C	P53229	120 aa		5.7	□□□□□ -1.5
URA3	YEL021W	GTR1	Q00582	310 aa		5.7	□□□□□ -1.5
URA3	YEL021W	PRP42	Q03776	544 aa	Known RBP	5.7	□□□□□ -1.5
URA3	YEL021W	MTQ2	Q03920	221 aa	Predicted RBP	5.7	□□□□□ -1.5
URA3	YEL021W	YKU80	Q04437	629 aa		5.7	□□□□□ -1.5
URA3	YEL021W	CIA1	Q05583	330 aa		5.7	□□□□□ -1.5
URA3	YEL021W	ATG38	Q05789	226 aa	Known RBP	5.7	□□□□□ -1.5
URA3	YEL021W	HSH49	Q99181	213 aa	Predicted RBP	5.7	□□□□□ -1.5
URA3	YEL021W	TRM732	Q03496	1420 aa		5.69	□□□□□ -1.5
URA3	YEL021W	RPC40	P07703	335 aa	Known RBP	5.69	□□□□□ -1.5
URA3	YEL021W	KAR3	P17119	729 aa		5.69	□□□□□ -1.5
URA3	YEL021W	SUI2	P20459	304 aa	Known RBP	5.69	□□□□□ -1.5
URA3	YEL021W	UGA4	P32837	571 aa		5.69	□□□□□ -1.5
URA3	YEL021W	YBL028C	P38202	106 aa		5.69	□□□□□ -1.5
URA3	YEL021W	UBS1	P38290	277 aa		5.69	□□□□□ -1.5
URA3	YEL021W	TPA1	P40032	644 aa	Known RBP	5.69	□□□□□ -1.5
URA3	YEL021W	ERR3	P42222	437 aa		5.69	□□□□□ -1.5
URA3	YEL021W	MRPS18	P42847	217 aa		5.69	□□□□□ -1.5
URA3	YEL021W	DUG1	P43616	481 aa	Known RBP	5.69	□□□□□ -1.5
URA3	YEL021W	NIT2	P47016	307 aa		5.69	□□□□□ -1.5
URA3	YEL021W	YJL055W	P47044	245 aa		5.69	□□□□□ -1.5
URA3	YEL021W	UTP8	P53276	713 aa	Known RBP	5.69	□□□□□ -1.5
URA3	YEL021W	YGR250C	P53316	781 aa	Known RBP	5.69	□□□□□ -1.5
URA3	YEL021W	SPO1	P53541	631 aa		5.69	□□□□□ -1.5
URA3	YEL021W	RAT1	Q02792	1006 aa	Known RBP	5.69	□□□□□ -1.5
URA3	YEL021W	TAP42	Q04372	366 aa		5.69	□□□□□ -1.5
URA3	YEL021W	TDA9	Q04545	1251 aa		5.69	□□□□□ -1.5
URA3	YEL021W	NOC3	Q07896	663 aa	Predicted RBP	5.69	□□□□□ -1.5
URA3	YEL021W	RRG1	Q12167	365 aa	Predicted RBP	5.69	□□□□□ -1.5
URA3	YEL021W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.69	□□□□□ -1.5	not detected
URA3	YEL021W	SMC4	Q12267	1418 aa		5.68	□□□□□ -1.5
URA3	YEL021W	YMR084W	A2P2R3	262 aa		5.68	□□□□□ -1.5
URA3	YEL021W	FUR1	P18562	216 aa	Known RBP	5.68	□□□□□ -1.5
URA3	YEL021W	BAS1	P22035	811 aa		5.68	□□□□□ -1.5
URA3	YEL021W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	not detected
URA3	YEL021W	CMK1	P27466	446 aa	Known RBP	5.68	□□□□□ -1.5
URA3	YEL021W	ORC2	P32833	620 aa		5.68	□□□□□ -1.5
URA3	YEL021W	CCL1	P37366	393 aa		5.68	□□□□□ -1.5
URA3	YEL021W	NOP16	P40007	231 aa	Known RBP	5.68	□□□□□ -1.5
URA3	YEL021W	AXL1	P40851	1208 aa		5.68	□□□□□ -1.5
URA3	YEL021W	MDE1	P47095	244 aa		5.68	□□□□□ -1.5
URA3	YEL021W	HSV2	P50079	448 aa	Predicted RBP	5.68	□□□□□ -1.5
URA3	YEL021W	PCL10	P53124	433 aa		5.68	□□□□□ -1.5
URA3	YEL021W	ERP6	P53198	216 aa		5.68	□□□□□ -1.5
URA3	YEL021W	HST1	P53685	503 aa		5.68	□□□□□ -1.5
URA3	YEL021W	DSL1	P53847	754 aa		5.68	□□□□□ -1.5
URA3	YEL021W	ERV25	P54837	211 aa	Known RBP	5.68	□□□□□ -1.5
URA3	YEL021W	REX2	P54964	269 aa	Known RBP	5.68	□□□□□ -1.5
URA3	YEL021W	YMR111C	Q04461	462 aa	Predicted RBP	5.68	□□□□□ -1.5
URA3	YEL021W	PMT7	Q06644	662 aa		5.68	□□□□□ -1.5
URA3	YEL021W	MDM12	Q92328	271 aa		5.68	□□□□□ -1.5
URA3	YEL021W	DFG16	Q99234	619 aa		5.68	□□□□□ -1.5
URA3	YEL021W	STF1	P01098	86 aa		5.67	□□□□□ -1.5
URA3	YEL021W	RPB2	P08518	1224 aa	Known RBP	5.67	□□□□□ -1.5
URA3	YEL021W	MET8	P15807	274 aa		5.67	□□□□□ -1.5
URA3	YEL021W	AGP1	P25376	633 aa		5.67	□□□□□ -1.5
URA3	YEL021W	LYP1	P32487	611 aa		5.67	□□□□□ -1.5
URA3	YEL021W	PPQ1	P32945	549 aa		5.67	□□□□□ -1.5
URA3	YEL021W	SPC29	P33419	253 aa		5.67	□□□□□ -1.5
URA3	YEL021W	PEX18	P38855	283 aa		5.67	□□□□□ -1.5
URA3	YEL021W	SWD1	P39706	426 aa		5.67	□□□□□ -1.5
URA3	YEL021W	PIC2	P40035	300 aa		5.67	□□□□□ -1.5
URA3	YEL021W	AGX1	P43567	385 aa		5.67	□□□□□ -1.5
URA3	YEL021W	CCM1	P48237	864 aa	Predicted RBP	5.67	□□□□□ -1.5
URA3	YEL021W	FOL2	P51601	243 aa	Known RBP	5.67	□□□□□ -1.5
URA3	YEL021W	RBG2	P53295	368 aa	Known RBP	5.67	□□□□□ -1.5
URA3	YEL021W	SDA1	P53313	767 aa	Known RBP	5.67	□□□□□ -1.5
URA3	YEL021W	MRPL19	P53875	158 aa		5.67	□□□□□ -1.5
URA3	YEL021W	SHE9	Q04172	456 aa		5.67	□□□□□ -1.5
URA3	YEL021W	CUE5	Q08412	411 aa	Known RBP	5.67	□□□□□ -1.5
URA3	YEL021W	ETT1	Q08421	412 aa	Known RBP	5.67	□□□□□ -1.5
URA3	YEL021W	PGA3	Q12746	312 aa	Known RBP	5.67	□□□□□ -1.5
URA3	YEL021W	MET5	P47169	1442 aa		5.66	□□□□□ -1.5
URA3	YEL021W	PDX1	P16451	410 aa		5.66	□□□□□ -1.5
URA3	YEL021W	CBP3	P21560	335 aa		5.66	□□□□□ -1.5
URA3	YEL021W	TRX1	P22217	103 aa	Known RBP	5.66	□□□□□ -1.5
URA3	YEL021W	RET1	P22276	1149 aa	Known RBP	5.66	□□□□□ -1.5
URA3	YEL021W	NFS1	P25374	497 aa		5.66	□□□□□ -1.5
URA3	YEL021W	RER1	P25560	188 aa		5.66	□□□□□ -1.5
URA3	YEL021W	ELM1	P32801	640 aa		5.66	□□□□□ -1.5
URA3	YEL021W	MRE11	P32829	692 aa		5.66	□□□□□ -1.5
URA3	YEL021W	COY1	P34237	679 aa		5.66	□□□□□ -1.5
URA3	YEL021W	MRP8	P35719	219 aa		5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms