RNA–Protein interactions for RNA: YDL223C

HBT1, Transcript of Shmoo tip protein, substrate of Hub1p ubiquitin-like protein, yeast

Gene HBT1, Length 3,141 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HBT1	YDL223C	PTP2	P29461	750 aa		3.76	□□□□□ -1.81
HBT1	YDL223C	MNN4	P36044	1178 aa		3.76	□□□□□ -1.81
HBT1	YDL223C	HIS6	P40545	261 aa		3.76	□□□□□ -1.81
HBT1	YDL223C	ALY2	P47029	1046 aa		3.76	□□□□□ -1.81
HBT1	YDL223C	SDH1	Q00711	640 aa		3.76	□□□□□ -1.81
HBT1	YDL223C	DCS2	Q12123	353 aa		3.76	□□□□□ -1.81
HBT1	YDL223C	YLR149C	Q99296	730 aa		3.76	□□□□□ -1.81
HBT1	YDL223C	EDE1	P34216	1381 aa		3.76	□□□□□ -1.81
HBT1	YDL223C	RPS4A	P0CX35	261 aa	Known RBP	3.76	□□□□□ -1.81
HBT1	YDL223C	RPS4B	P0CX36	261 aa	Known RBP	3.76	□□□□□ -1.81
HBT1	YDL223C	DBF20	P32328	564 aa		3.76	□□□□□ -1.81
HBT1	YDL223C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.76	□□□□□ -1.81	not detected
HBT1	YDL223C	LEE1	Q02799	301 aa	Known RBP	3.76	□□□□□ -1.81
HBT1	YDL223C	COX11	P19516	300 aa	Known RBP	3.75	□□□□□ -1.81
HBT1	YDL223C	TNA1	P53322	534 aa		3.75	□□□□□ -1.81
HBT1	YDL223C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	3.75	□□□□□ -1.81	not detected
HBT1	YDL223C	CIA1	Q05583	330 aa		3.75	□□□□□ -1.81
HBT1	YDL223C	YLL058W	Q12198	575 aa		3.75	□□□□□ -1.81
HBT1	YDL223C	RIB2	Q12362	591 aa	Known RBP	3.75	□□□□□ -1.81
HBT1	YDL223C	RMP1	Q12530	201 aa		3.75	□□□□□ -1.81
HBT1	YDL223C	YKR078W	P36158	585 aa	Known RBP	3.75	□□□□□ -1.81
HBT1	YDL223C	ERP2	P39704	215 aa		3.75	□□□□□ -1.81
HBT1	YDL223C	DSE4	P53753	1117 aa		3.75	□□□□□ -1.81
HBT1	YDL223C	SSL1	Q04673	461 aa	Predicted RBP	3.75	□□□□□ -1.81
HBT1	YDL223C	YLL054C	Q12244	843 aa		3.75	□□□□□ -1.81
HBT1	YDL223C	DOT5	P40553	215 aa		3.75	□□□□□ -1.81
HBT1	YDL223C	RLP7	P40693	322 aa	Known RBP	3.75	□□□□□ -1.81
HBT1	YDL223C	SBE2	P42223	864 aa	Known RBP	3.75	□□□□□ -1.81
HBT1	YDL223C	RET2	P43621	546 aa		3.75	□□□□□ -1.81
HBT1	YDL223C	JJJ3	P47138	172 aa		3.75	□□□□□ -1.81
HBT1	YDL223C	ROM2	P51862	1356 aa	Known RBP	3.75	□□□□□ -1.81
HBT1	YDL223C	HFI1	Q12060	488 aa		3.75	□□□□□ -1.81
HBT1	YDL223C	APC1	P53886	1748 aa		3.74	□□□□□ -1.81
HBT1	YDL223C	URA1	P28272	314 aa	Predicted RBP	3.74	□□□□□ -1.81
HBT1	YDL223C	TRK2	P28584	889 aa		3.74	□□□□□ -1.81
HBT1	YDL223C	OAF3	P36023	863 aa		3.74	□□□□□ -1.81
HBT1	YDL223C	TDA3	P38758	523 aa		3.74	□□□□□ -1.81
HBT1	YDL223C	CEP3	P40969	608 aa		3.74	□□□□□ -1.81
HBT1	YDL223C	RPN11	P43588	306 aa	Known RBP	3.74	□□□□□ -1.81
HBT1	YDL223C	NPY1	P53164	384 aa		3.74	□□□□□ -1.81
HBT1	YDL223C	GCR2	Q01722	534 aa		3.74	□□□□□ -1.81
HBT1	YDL223C	ASM4	Q05166	528 aa		3.74	□□□□□ -1.81
HBT1	YDL223C	CRR1	Q05790	422 aa		3.74	□□□□□ -1.81
HBT1	YDL223C	HRK1	Q08732	759 aa	Known RBP	3.74	□□□□□ -1.81
HBT1	YDL223C	YOR022C	Q12204	715 aa		3.74	□□□□□ -1.81
HBT1	YDL223C	YVC1	Q12324	675 aa		3.74	□□□□□ -1.81
HBT1	YDL223C	RSF2	P46974	1380 aa		3.74	□□□□□ -1.81
HBT1	YDL223C	FUN30	P31380	1131 aa		3.74	□□□□□ -1.81
HBT1	YDL223C	QRI7	P43122	407 aa		3.74	□□□□□ -1.81
HBT1	YDL223C	YHM2	Q04013	314 aa		3.74	□□□□□ -1.81
HBT1	YDL223C	TMA64	Q04600	565 aa	Known RBP	3.74	□□□□□ -1.81
HBT1	YDL223C	COG4	Q06096	861 aa		3.74	□□□□□ -1.81
HBT1	YDL223C	MLC2	Q06580	163 aa		3.74	□□□□□ -1.81
HBT1	YDL223C	RRP6	Q12149	733 aa	Known RBP	3.74	□□□□□ -1.81
HBT1	YDL223C	HAL9	Q12180	1030 aa		3.74	□□□□□ -1.81
HBT1	YDL223C	NAM7	P30771	971 aa	Known RBP	3.73	□□□□□ -1.81
HBT1	YDL223C	MAL31	P38156	614 aa		3.73	□□□□□ -1.81
HBT1	YDL223C	YAP1801	P38856	637 aa		3.73	□□□□□ -1.81
HBT1	YDL223C	NIT3	P49954	291 aa		3.73	□□□□□ -1.81
HBT1	YDL223C	COG8	Q04632	607 aa		3.73	□□□□□ -1.81
HBT1	YDL223C	NOT3	P06102	836 aa	Known RBP	3.73	□□□□□ -1.81
HBT1	YDL223C	MPE1	P35728	441 aa	Known RBP	3.73	□□□□□ -1.81
HBT1	YDL223C	ECM21	P38167	1117 aa	Known RBP	3.73	□□□□□ -1.81
HBT1	YDL223C	EAF5	P39995	279 aa		3.73	□□□□□ -1.81
HBT1	YDL223C	YPR196W	Q06595	470 aa		3.73	□□□□□ -1.81
HBT1	YDL223C	ENA1	P13587	1091 aa		3.73	□□□□□ -1.81
HBT1	YDL223C	NPR2	P39923	615 aa		3.73	□□□□□ -1.81
HBT1	YDL223C	PRP43	P53131	767 aa	Known RBP	3.73	□□□□□ -1.81
HBT1	YDL223C	BUD9	P53226	547 aa		3.73	□□□□□ -1.81
HBT1	YDL223C	ENA2	Q01896	1091 aa		3.73	□□□□□ -1.81
HBT1	YDL223C	REH1	Q06709	432 aa		3.73	□□□□□ -1.81
HBT1	YDL223C	THI21	Q08975	551 aa		3.73	□□□□□ -1.81
HBT1	YDL223C	YPR027C	Q12079	277 aa		3.73	□□□□□ -1.81
HBT1	YDL223C	ENA5	Q12691	1091 aa		3.73	□□□□□ -1.81
HBT1	YDL223C	SNF2	P22082	1703 aa		3.72	□□□□□ -1.81
HBT1	YDL223C	YKU70	P32807	602 aa		3.72	□□□□□ -1.81
HBT1	YDL223C	WHI3	P34761	661 aa	Known RBP	3.72	□□□□□ -1.81
HBT1	YDL223C	DID4	P36108	232 aa		3.72	□□□□□ -1.81
HBT1	YDL223C	TRZ1	P36159	838 aa	Predicted RBP	3.72	□□□□□ -1.81
HBT1	YDL223C	PIK1	P39104	1066 aa		3.72	□□□□□ -1.81
HBT1	YDL223C	BRE5	P53741	515 aa	Known RBP	3.72	□□□□□ -1.81
HBT1	YDL223C	YML131W	Q03102	365 aa		3.72	□□□□□ -1.81
HBT1	YDL223C	SKY1	Q03656	742 aa		3.72	□□□□□ -1.81
HBT1	YDL223C	HPF1	Q05164	967 aa		3.72	□□□□□ -1.81
HBT1	YDL223C	OMS1	Q06668	471 aa		3.72	□□□□□ -1.81
HBT1	YDL223C	CDC26	P14724	124 aa		3.72	□□□□□ -1.81
HBT1	YDL223C	CYS3	P31373	394 aa	Known RBP	3.72	□□□□□ -1.81
HBT1	YDL223C	HSL7	P38274	827 aa		3.72	□□□□□ -1.81
HBT1	YDL223C	DOT6	P40059	670 aa	Known RBP	3.72	□□□□□ -1.81
HBT1	YDL223C	AIM21	P40563	679 aa		3.72	□□□□□ -1.81
HBT1	YDL223C	BRE1	Q07457	700 aa	Known RBP	3.72	□□□□□ -1.81
HBT1	YDL223C	SLM3	Q12093	417 aa		3.72	□□□□□ -1.81
HBT1	YDL223C	YOL114C	Q12322	202 aa		3.72	□□□□□ -1.81
HBT1	YDL223C	GLN4	P13188	809 aa	Known RBP	3.71	□□□□□ -1.82
HBT1	YDL223C	SEC18	P18759	758 aa	Known RBP	3.71	□□□□□ -1.82
HBT1	YDL223C	SEC65	P29478	273 aa		3.71	□□□□□ -1.82
HBT1	YDL223C	RPN10	P38886	268 aa	Known RBP	3.71	□□□□□ -1.82
HBT1	YDL223C	VMS1	Q04311	632 aa	Known RBP	3.71	□□□□□ -1.82
HBT1	YDL223C	SVS1	Q12254	260 aa		3.71	□□□□□ -1.82
HBT1	YDL223C	YOL087C	Q99247	1116 aa		3.71	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms