RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W GUD1Q07729 489 aa2.04□□□□□ -2.08
TRM3YDL112W OSW2Q12202 724 aa2.04□□□□□ -2.08
TRM3YDL112W MYO1P08964 1928 aa2.03□□□□□ -2.08
TRM3YDL112W BI4P03879 638 aa2.03□□□□□ -2.08
TRM3YDL112W SPS1P08458 490 aa2.03□□□□□ -2.08
TRM3YDL112W STI1P15705 589 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
TRM3YDL112W CDC11P32458 415 aa2.03□□□□□ -2.08
TRM3YDL112W EUG1P32474 517 aa2.03□□□□□ -2.08
TRM3YDL112W NNK1P36003 928 aa2.03□□□□□ -2.08
TRM3YDL112W MCD4P36051 919 aa2.03□□□□□ -2.08
TRM3YDL112W CCZ1P38273 704 aa2.03□□□□□ -2.08
TRM3YDL112W KSP1P38691 1029 aaKnown RBP2.03□□□□□ -2.08
TRM3YDL112W KRI1P42846 591 aaKnown RBP2.03□□□□□ -2.08
TRM3YDL112W VPS53P47061 822 aa2.03□□□□□ -2.08
TRM3YDL112W NCE103P53615 221 aa2.03□□□□□ -2.08
TRM3YDL112W PRP9P19736 530 aaKnown RBP2.03□□□□□ -2.08
TRM3YDL112W PTK1P36002 662 aaPredicted RBP2.03□□□□□ -2.08
TRM3YDL112W GSM1P42950 618 aa2.03□□□□□ -2.08
TRM3YDL112W HLJ1P48353 224 aa2.03□□□□□ -2.08
TRM3YDL112W PIP2P52960 996 aa2.03□□□□□ -2.08
TRM3YDL112W FMP25Q08023 583 aa2.03□□□□□ -2.08
TRM3YDL112W TRE1Q08919 783 aa2.03□□□□□ -2.08
TRM3YDL112W SUT2Q12286 268 aa2.03□□□□□ -2.08
TRM3YDL112W ADE8P04161 214 aa2.03□□□□□ -2.08
TRM3YDL112W CIT2P08679 460 aa2.03□□□□□ -2.08
TRM3YDL112W PRE8P23639 250 aa2.03□□□□□ -2.08
TRM3YDL112W DBP2P24783 546 aaKnown RBP2.03□□□□□ -2.08
TRM3YDL112W YSC84P32793 468 aa2.03□□□□□ -2.08
TRM3YDL112W YFL066CP43538 392 aa2.03□□□□□ -2.08
TRM3YDL112W CIT3P43635 486 aa2.03□□□□□ -2.08
TRM3YDL112W CLF1Q12309 687 aaPredicted RBP2.03□□□□□ -2.08
TRM3YDL112W YGR161W-CQ3E744 92 aa2.03□□□□□ -2.08
TRM3YDL112W TUB2P02557 457 aaKnown RBP2.03□□□□□ -2.09
TRM3YDL112W MSD1P15179 658 aaKnown RBP2.03□□□□□ -2.09
TRM3YDL112W SUI2P20459 304 aaKnown RBP2.03□□□□□ -2.09
TRM3YDL112W SRM1P21827 482 aa2.03□□□□□ -2.09
TRM3YDL112W MRP8P35719 219 aa2.03□□□□□ -2.09
TRM3YDL112W YBL028CP38202 106 aa2.03□□□□□ -2.09
TRM3YDL112W YVC1Q12324 675 aa2.03□□□□□ -2.09
TRM3YDL112W RPL8BP29453 256 aaKnown RBP2.02□□□□□ -2.09
TRM3YDL112W UIP5P36137 443 aa2.02□□□□□ -2.09
TRM3YDL112W SAF1P38352 637 aa2.02□□□□□ -2.09
TRM3YDL112W TOM71P38825 639 aaKnown RBP2.02□□□□□ -2.09
TRM3YDL112W OSW7P43611 510 aa2.02□□□□□ -2.09
TRM3YDL112W SRP1Q02821 542 aaKnown RBP2.02□□□□□ -2.09
TRM3YDL112W HOS3Q02959 697 aaKnown RBP2.02□□□□□ -2.09
TRM3YDL112W CSI1Q04368 295 aa2.02□□□□□ -2.09
TRM3YDL112W YLR122CQ12312 125 aa2.02□□□□□ -2.09
TRM3YDL112W RKM4Q12504 494 aa2.02□□□□□ -2.09
TRM3YDL112W PRC1P00729 532 aa2.02□□□□□ -2.09
TRM3YDL112W RTA1P53047 317 aa2.02□□□□□ -2.09
TRM3YDL112W VPS30Q02948 557 aa2.02□□□□□ -2.09
TRM3YDL112W INM2Q05533 292 aa2.02□□□□□ -2.09
TRM3YDL112W HRQ1Q05549 1077 aa2.02□□□□□ -2.09
TRM3YDL112W PDR18P53756 1333 aa2.02□□□□□ -2.09
TRM3YDL112W RPL11AP0C0W9 174 aaKnown RBP2.02□□□□□ -2.09
TRM3YDL112W SNF7P39929 240 aaKnown RBP2.02□□□□□ -2.09
TRM3YDL112W RSM24Q03976 319 aa2.02□□□□□ -2.09
TRM3YDL112W SLP1Q12232 587 aa2.02□□□□□ -2.09
TRM3YDL112W RPL11BQ3E757 174 aaPredicted RBP2.02□□□□□ -2.09
TRM3YDL112W TY1B-AO13527 1196 aaKnown RBP2.01□□□□□ -2.09
TRM3YDL112W AI3P03877 415 aa2.01□□□□□ -2.09
TRM3YDL112W CAN1P04817 590 aa2.01□□□□□ -2.09
TRM3YDL112W VMA2P16140 517 aaKnown RBP2.01□□□□□ -2.09
TRM3YDL112W OPI1P21957 404 aa2.01□□□□□ -2.09
TRM3YDL112W VBA3P25594 458 aa2.01□□□□□ -2.09
TRM3YDL112W RPD3P32561 433 aa2.01□□□□□ -2.09
TRM3YDL112W BCS1P32839 456 aa2.01□□□□□ -2.09
TRM3YDL112W TGL1P34163 548 aa2.01□□□□□ -2.09
TRM3YDL112W PBY1P38254 753 aa2.01□□□□□ -2.09
TRM3YDL112W RGD1P38339 666 aa2.01□□□□□ -2.09
TRM3YDL112W RTS1P38903 757 aa2.01□□□□□ -2.09
TRM3YDL112W AFG3P39925 761 aa2.01□□□□□ -2.09
TRM3YDL112W COX18P53239 316 aa2.01□□□□□ -2.09
TRM3YDL112W ISA1Q07821 250 aaPredicted RBP2.01□□□□□ -2.09
TRM3YDL112W YOR022CQ12204 715 aa2.01□□□□□ -2.09
TRM3YDL112W SNA3P14359 133 aa2.01□□□□□ -2.09
TRM3YDL112W SBA1P28707 216 aaKnown RBP2.01□□□□□ -2.09
TRM3YDL112W PIN4P34217 668 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
TRM3YDL112W MCX1P38323 520 aaPredicted RBP2.01□□□□□ -2.09
TRM3YDL112W IRR1P40541 1150 aa2.01□□□□□ -2.09
TRM3YDL112W SPT20P50875 604 aa2.01□□□□□ -2.09
TRM3YDL112W YGL242CP53066 181 aa2.01□□□□□ -2.09
TRM3YDL112W MLC1P53141 149 aa2.01□□□□□ -2.09
TRM3YDL112W NOG1Q02892 647 aaKnown RBP2.01□□□□□ -2.09
TRM3YDL112W YML037CQ03703 340 aa2.01□□□□□ -2.09
TRM3YDL112W RCL1Q08096 367 aaPredicted RBP2.01□□□□□ -2.09
TRM3YDL112W RAD61Q99359 647 aa2.01□□□□□ -2.09
TRM3YDL112W CYC1P00044 109 aaPredicted RBP2.01□□□□□ -2.09
TRM3YDL112W RME1P32338 300 aaKnown RBP2.01□□□□□ -2.09
TRM3YDL112W YIL108WP40483 696 aaKnown RBP2.01□□□□□ -2.09
TRM3YDL112W YIL092WP40497 633 aa2.01□□□□□ -2.09
TRM3YDL112W ALY2P47029 1046 aa2.01□□□□□ -2.09
TRM3YDL112W KEL3Q08979 651 aaPredicted RBP2.01□□□□□ -2.09
TRM3YDL112W AGP1P25376 633 aa2□□□□□ -2.09
TRM3YDL112W MDL2P33311 773 aa2□□□□□ -2.09
TRM3YDL112W RRP14P36080 434 aaKnown RBP2□□□□□ -2.09
TRM3YDL112W GRX7P38068 203 aa2□□□□□ -2.09
TRM3YDL112W ZRG8P40021 1076 aa2□□□□□ -2.09
TRM3YDL112W SIP5P40210 489 aaKnown RBP2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms