RNA–Protein interactions for RNA: YBR295W

PCA1, Transcript of Cadmium transporting P-type ATPase, yeast

Gene PCA1, Length 3,651 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCA1	YBR295W	HOM3	P10869	527 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	CDC15	P27636	974 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	TEF4	P36008	412 aa	Known RBP	4.88	□□□□□ -1.63
PCA1	YBR295W	TYS1	P36421	394 aa	Known RBP	4.88	□□□□□ -1.63
PCA1	YBR295W	CBR1	P38626	284 aa	Known RBP	4.88	□□□□□ -1.63
PCA1	YBR295W	PCF11	P39081	626 aa	Predicted RBP	4.88	□□□□□ -1.63
PCA1	YBR295W	HXT13	P39924	564 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	MMM1	P41800	426 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	KAP114	P53067	1004 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	PEF1	P53238	335 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	ZRG17	P53735	605 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	NSE1	Q07913	336 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	APL4	Q12028	832 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	FOB1	O13329	566 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	STE3	P06783	470 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	MST1	P07236	462 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	MSD1	P15179	658 aa	Known RBP	4.88	□□□□□ -1.63
PCA1	YBR295W	MSS116	P15424	664 aa	Known RBP	4.88	□□□□□ -1.63
PCA1	YBR295W	REB1	P21538	810 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	KIP1	P28742	1111 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	VPS29	P38759	282 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	CCT5	P40413	562 aa	Known RBP	4.88	□□□□□ -1.63
PCA1	YBR295W	RTS2	P40962	232 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	CNM67	P53865	581 aa	Known RBP	4.88	□□□□□ -1.63
PCA1	YBR295W	PTA1	Q01329	785 aa	Predicted RBP	4.88	□□□□□ -1.63
PCA1	YBR295W	SPC24	Q04477	213 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	COX20	Q04935	205 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	GLO2	Q05584	274 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	VHS3	Q08438	674 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	ICL2	Q12031	575 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	SRN2	Q99176	213 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	YBT1	P32386	1661 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	CKA2	P19454	339 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	GDA1	P32621	518 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	RRN3	P36070	627 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	FUI1	P38196	639 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	AVT6	P40074	448 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	QDR2	P40474	542 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	MKT1	P40850	830 aa	Known RBP	4.88	□□□□□ -1.63
PCA1	YBR295W	MIC19	P43594	170 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	TRF5	P48561	642 aa	Known RBP	4.88	□□□□□ -1.63
PCA1	YBR295W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
PCA1	YBR295W	FOX2	Q02207	900 aa	Known RBP	4.88	□□□□□ -1.63
PCA1	YBR295W	RMD1	Q03441	430 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	YEH2	Q07950	538 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	TMA46	Q12000	345 aa	Known RBP	4.88	□□□□□ -1.63
PCA1	YBR295W	SEY1	Q99287	776 aa		4.88	□□□□□ -1.63
PCA1	YBR295W	HSP60	P19882	572 aa	Known RBP	4.87	□□□□□ -1.63
PCA1	YBR295W	CLN2	P20438	545 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	PEX1	P24004	1043 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	DPB2	P24482	689 aa	Predicted RBP	4.87	□□□□□ -1.63
PCA1	YBR295W	PRR1	P28708	518 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	ABZ1	P37254	787 aa	Predicted RBP	4.87	□□□□□ -1.63
PCA1	YBR295W	PTC4	P38089	393 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	KAP104	P38217	918 aa	Known RBP	4.87	□□□□□ -1.63
PCA1	YBR295W	SSO2	P39926	295 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	TIM54	P47045	478 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	SPC105	P53148	917 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	UTP8	P53276	713 aa	Known RBP	4.87	□□□□□ -1.63
PCA1	YBR295W	DSE4	P53753	1117 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	GOR1	P53839	350 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	YDR514C	Q04408	483 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	EMI2	Q04409	500 aa	Known RBP	4.87	□□□□□ -1.63
PCA1	YBR295W	SUB2	Q07478	446 aa	Known RBP	4.87	□□□□□ -1.63
PCA1	YBR295W	ATG29	Q12092	213 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	YPR022C	Q12139	1133 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	TIP41	Q12199	356 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	CNA1	P23287	553 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	PYC2	P32327	1180 aa	Known RBP	4.87	□□□□□ -1.63
PCA1	YBR295W	TYE7	P33122	291 aa	Predicted RBP	4.87	□□□□□ -1.63
PCA1	YBR295W	AGE2	P40529	298 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	HMO1	Q03973	246 aa	Known RBP	4.87	□□□□□ -1.63
PCA1	YBR295W	SMC5	Q08204	1093 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	SNT2	P53127	1403 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	TRP2	P00899	507 aa	Known RBP	4.87	□□□□□ -1.63
PCA1	YBR295W	RAD53	P22216	821 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
PCA1	YBR295W	BUD23	P25627	275 aa	Predicted RBP	4.87	□□□□□ -1.63
PCA1	YBR295W	SUV3	P32580	737 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	YKL091C	P33324	310 aa	Known RBP	4.87	□□□□□ -1.63
PCA1	YBR295W	TDP1	P38319	544 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	NUP85	P46673	744 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	NUP84	P52891	726 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	RMI1	Q02685	241 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	ISA1	Q07821	250 aa	Predicted RBP	4.87	□□□□□ -1.63
PCA1	YBR295W	NTG2	Q08214	380 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	YOR289W	Q12012	251 aa	Predicted RBP	4.87	□□□□□ -1.63
PCA1	YBR295W	MAM3	Q12296	706 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	HAP1	P0CE41	1502 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	NTE1	Q04958	1679 aa		4.87	□□□□□ -1.63
PCA1	YBR295W	RPO21	P04050	1733 aa	Known RBP	4.86	□□□□□ -1.63
PCA1	YBR295W	PDR5	P33302	1511 aa	Known RBP	4.86	□□□□□ -1.63
PCA1	YBR295W	MRPL8	P22353	238 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	ZIP1	P31111	875 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	STM1	P39015	273 aa	Known RBP	4.86	□□□□□ -1.63
PCA1	YBR295W	PDS1	P40316	373 aa	Predicted RBP	4.86	□□□□□ -1.63
PCA1	YBR295W	FYV10	P40492	516 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	ENT3	P47160	408 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	CGR1	P53188	120 aa		4.86	□□□□□ -1.63
PCA1	YBR295W	HXT17	P53631	564 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms