RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeast

Gene SHG1, Length 429 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHG1	YBR258C	RPL8A	P17076	256 aa	Known RBP	4.12	□□□□□ -1.75
SHG1	YBR258C	DAL7	P21826	554 aa		4.12	□□□□□ -1.75
SHG1	YBR258C	STO1	P34160	861 aa	Known RBP	4.12	□□□□□ -1.75
SHG1	YBR258C	THI80	P35202	319 aa		4.12	□□□□□ -1.75
SHG1	YBR258C	AIM3	P38266	947 aa	Known RBP	4.12	□□□□□ -1.75
SHG1	YBR258C	YJR142W	P47173	342 aa		4.12	□□□□□ -1.75
SHG1	YBR258C	NCS6	P53088	359 aa		4.12	□□□□□ -1.75
SHG1	YBR258C	TFB2	Q02939	513 aa		4.12	□□□□□ -1.75
SHG1	YBR258C	YBR182C-A	Q8TGU6	64 aa		4.12	□□□□□ -1.75
SHG1	YBR258C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
SHG1	YBR258C	EMC1	P25574	760 aa		4.11	□□□□□ -1.75
SHG1	YBR258C	PCL2	P25693	308 aa		4.11	□□□□□ -1.75
SHG1	YBR258C	DSS1	P39112	969 aa		4.11	□□□□□ -1.75
SHG1	YBR258C	NPR2	P39923	615 aa		4.11	□□□□□ -1.75
SHG1	YBR258C	SDP1	P40479	209 aa		4.11	□□□□□ -1.75
SHG1	YBR258C	SNP1	Q00916	300 aa	Predicted RBP	4.11	□□□□□ -1.75
SHG1	YBR258C	YAP6	Q03935	383 aa		4.11	□□□□□ -1.75
SHG1	YBR258C	LRS4	Q04087	347 aa	Known RBP	4.11	□□□□□ -1.75
SHG1	YBR258C	SSL1	Q04673	461 aa	Predicted RBP	4.11	□□□□□ -1.75
SHG1	YBR258C	RPS9A	O13516	197 aa	Known RBP	4.1	□□□□□ -1.75
SHG1	YBR258C	STE11	P23561	717 aa		4.1	□□□□□ -1.75
SHG1	YBR258C	CYS3	P31373	394 aa	Known RBP	4.1	□□□□□ -1.75
SHG1	YBR258C	RPD3	P32561	433 aa		4.1	□□□□□ -1.75
SHG1	YBR258C	SET5	P38890	526 aa	Known RBP	4.1	□□□□□ -1.75
SHG1	YBR258C	RLP7	P40693	322 aa	Known RBP	4.1	□□□□□ -1.75
SHG1	YBR258C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
SHG1	YBR258C	YNL193W	P53870	558 aa		4.1	□□□□□ -1.75
SHG1	YBR258C	YDR338C	Q05497	695 aa		4.1	□□□□□ -1.75
SHG1	YBR258C	YLR224W	Q05947	369 aa		4.1	□□□□□ -1.75
SHG1	YBR258C	WHI4	Q07655	649 aa	Known RBP	4.1	□□□□□ -1.75
SHG1	YBR258C	YGR161W-C	Q3E744	92 aa		4.1	□□□□□ -1.75
SHG1	YBR258C	MIH1	P23748	554 aa		4.09	□□□□□ -1.75
SHG1	YBR258C	YCL002C	P25565	263 aa		4.09	□□□□□ -1.75
SHG1	YBR258C	MGS1	P40151	587 aa		4.09	□□□□□ -1.75
SHG1	YBR258C	YIL108W	P40483	696 aa	Known RBP	4.09	□□□□□ -1.75
SHG1	YBR258C	CEP3	P40969	608 aa		4.09	□□□□□ -1.75
SHG1	YBR258C	AVT1	P47082	602 aa		4.09	□□□□□ -1.75
SHG1	YBR258C	GCV2	P49095	1034 aa		4.09	□□□□□ -1.75
SHG1	YBR258C	ZDS1	P50111	915 aa	Known RBP	4.09	□□□□□ -1.75
SHG1	YBR258C	SPT20	P50875	604 aa		4.09	□□□□□ -1.75
SHG1	YBR258C	GTF1	P53260	183 aa	Predicted RBP	4.09	□□□□□ -1.75
SHG1	YBR258C	DNM1	P54861	757 aa		4.09	□□□□□ -1.75
SHG1	YBR258C	GUP2	Q08929	609 aa		4.09	□□□□□ -1.75
SHG1	YBR258C	HAL9	Q12180	1030 aa		4.09	□□□□□ -1.75
SHG1	YBR258C	KCS1	Q12494	1050 aa		4.09	□□□□□ -1.75
SHG1	YBR258C	RNQ1	P25367	405 aa		4.08	□□□□□ -1.76
SHG1	YBR258C	PER1	P25625	357 aa		4.08	□□□□□ -1.76
SHG1	YBR258C	HOG1	P32485	435 aa		4.08	□□□□□ -1.76
SHG1	YBR258C	PCM1	P38628	557 aa	Known RBP	4.08	□□□□□ -1.76
SHG1	YBR258C	ALY2	P47029	1046 aa		4.08	□□□□□ -1.76
SHG1	YBR258C	YOR022C	Q12204	715 aa		4.08	□□□□□ -1.76
SHG1	YBR258C	GPR1	Q12361	961 aa		4.08	□□□□□ -1.76
SHG1	YBR258C	VPS13	Q07878	3144 aa		4.08	□□□□□ -1.76
SHG1	YBR258C	NUM1	Q00402	2748 aa		4.07	□□□□□ -1.76
SHG1	YBR258C	ADR1	P07248	1323 aa		4.07	□□□□□ -1.76
SHG1	YBR258C	DIF1	O13577	133 aa		4.07	□□□□□ -1.76
SHG1	YBR258C	SED4	P25365	1065 aa		4.07	□□□□□ -1.76
SHG1	YBR258C	SFP1	P32432	683 aa		4.07	□□□□□ -1.76
SHG1	YBR258C	LST4	P34239	828 aa		4.07	□□□□□ -1.76
SHG1	YBR258C	YHR078W	P38799	552 aa		4.07	□□□□□ -1.76
SHG1	YBR258C	EXG2	P52911	562 aa		4.07	□□□□□ -1.76
SHG1	YBR258C	PUS2	P53167	370 aa		4.07	□□□□□ -1.76
SHG1	YBR258C	YNR029C	P53729	429 aa	Known RBP	4.07	□□□□□ -1.76
SHG1	YBR258C	SLU7	Q02775	382 aa	Known RBP	4.07	□□□□□ -1.76
SHG1	YBR258C	NPC2	Q12408	173 aa		4.07	□□□□□ -1.76
SHG1	YBR258C	PRC1	P00729	532 aa		4.06	□□□□□ -1.76
SHG1	YBR258C	TUB3	P09734	445 aa	Known RBP	4.06	□□□□□ -1.76
SHG1	YBR258C	RAD18	P10862	487 aa		4.06	□□□□□ -1.76
SHG1	YBR258C	SFL1	P20134	766 aa		4.06	□□□□□ -1.76
SHG1	YBR258C	TOD6	P34219	525 aa		4.06	□□□□□ -1.76
SHG1	YBR258C	MAL31	P38156	614 aa		4.06	□□□□□ -1.76
SHG1	YBR258C	PLB1	P39105	664 aa		4.06	□□□□□ -1.76
SHG1	YBR258C	UBP12	P39538	1254 aa		4.06	□□□□□ -1.76
SHG1	YBR258C	DOT5	P40553	215 aa		4.06	□□□□□ -1.76
SHG1	YBR258C	BNA2	P47125	453 aa		4.06	□□□□□ -1.76
SHG1	YBR258C	EAF6	P47128	113 aa		4.06	□□□□□ -1.76
SHG1	YBR258C	ZIP2	P53061	704 aa		4.06	□□□□□ -1.76
SHG1	YBR258C	CLU1	Q03690	1277 aa	Known RBP	4.06	□□□□□ -1.76
SHG1	YBR258C	NHX1	Q04121	633 aa		4.06	□□□□□ -1.76
SHG1	YBR258C	ATG33	Q06485	197 aa		4.06	□□□□□ -1.76
SHG1	YBR258C	ENB1	Q08299	606 aa		4.06	□□□□□ -1.76
SHG1	YBR258C	GEA1	P47102	1408 aa	Predicted RBP	4.05	□□□□□ -1.76
SHG1	YBR258C	YLR358C	O13565	187 aa		4.05	□□□□□ -1.76
SHG1	YBR258C	HMG1	P12683	1054 aa		4.05	□□□□□ -1.76
SHG1	YBR258C	SEC21	P32074	935 aa	Known RBP	4.05	□□□□□ -1.76
SHG1	YBR258C	RPN10	P38886	268 aa	Known RBP	4.05	□□□□□ -1.76
SHG1	YBR258C	SQS1	P53866	767 aa	Known RBP	4.05	□□□□□ -1.76
SHG1	YBR258C	ASI2	P53895	289 aa		4.05	□□□□□ -1.76
SHG1	YBR258C	YVH1	Q02256	364 aa	Known RBP	4.05	□□□□□ -1.76
SHG1	YBR258C	DCG1	P32460	244 aa		4.04	□□□□□ -1.76
SHG1	YBR258C	GRX4	P32642	244 aa		4.04	□□□□□ -1.76
SHG1	YBR258C	SAP190	P36123	1033 aa		4.04	□□□□□ -1.76
SHG1	YBR258C	FLR1	P38124	548 aa		4.04	□□□□□ -1.76
SHG1	YBR258C	SIC1	P38634	284 aa		4.04	□□□□□ -1.76
SHG1	YBR258C	CRP1	P38845	465 aa	Known RBP	4.04	□□□□□ -1.76
SHG1	YBR258C	PMT3	P47190	753 aa		4.04	□□□□□ -1.76
SHG1	YBR258C	MNN10	P50108	393 aa	Known RBP	4.04	□□□□□ -1.76
SHG1	YBR258C	MET13	P53128	600 aa		4.04	□□□□□ -1.76
SHG1	YBR258C	YLR149C	Q99296	730 aa		4.04	□□□□□ -1.76
SHG1	YBR258C	CAT8	P39113	1433 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 80.9 ms