RNA–Protein interactions for RNA: YBR054W

YRO2, Transcript of Protein of unknown function with similarity to archaeal rhodopsins, yeast

Gene YRO2, Length 1,035 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YRO2	YBR054W	PCM1	P38628	557 aa	Known RBP	4.18	□□□□□ -1.74
YRO2	YBR054W	MIP6	P38760	659 aa	Known RBP	4.18	□□□□□ -1.74
YRO2	YBR054W	FPR3	P38911	411 aa	Known RBP	4.18	□□□□□ -1.74
YRO2	YBR054W	ECM1	P39715	212 aa		4.18	□□□□□ -1.74
YRO2	YBR054W	AMA1	P50082	593 aa		4.18	□□□□□ -1.74
YRO2	YBR054W	MUP1	P50276	574 aa		4.18	□□□□□ -1.74
YRO2	YBR054W	AIM14	P53109	570 aa		4.18	□□□□□ -1.74
YRO2	YBR054W	MET13	P53128	600 aa		4.18	□□□□□ -1.74
YRO2	YBR054W	YBP2	P53169	641 aa		4.18	□□□□□ -1.74
YRO2	YBR054W	SLI1	P53304	468 aa		4.18	□□□□□ -1.74
YRO2	YBR054W	ORC4	P54791	529 aa		4.18	□□□□□ -1.74
YRO2	YBR054W	DNM1	P54861	757 aa		4.18	□□□□□ -1.74
YRO2	YBR054W	RPN7	Q06103	429 aa	Known RBP	4.18	□□□□□ -1.74
YRO2	YBR054W	TGL5	Q12043	749 aa		4.18	□□□□□ -1.74
YRO2	YBR054W	GIN4	Q12263	1142 aa		4.18	□□□□□ -1.74
YRO2	YBR054W	PPR1	P07272	904 aa	Predicted RBP	4.17	□□□□□ -1.74
YRO2	YBR054W	ALG7	P07286	448 aa		4.17	□□□□□ -1.74
YRO2	YBR054W	HMG1	P12683	1054 aa		4.17	□□□□□ -1.74
YRO2	YBR054W	YBR053C	P38235	358 aa		4.17	□□□□□ -1.74
YRO2	YBR054W	DOT6	P40059	670 aa	Known RBP	4.17	□□□□□ -1.74
YRO2	YBR054W	MGS1	P40151	587 aa		4.17	□□□□□ -1.74
YRO2	YBR054W	YIR042C	P40586	236 aa		4.17	□□□□□ -1.74
YRO2	YBR054W	PRP31	P49704	494 aa	Predicted RBP	4.17	□□□□□ -1.74
YRO2	YBR054W	UBC9	P50623	157 aa	Predicted RBP	4.17	□□□□□ -1.74
YRO2	YBR054W	PCL10	P53124	433 aa		4.17	□□□□□ -1.74
YRO2	YBR054W	CTF4	Q01454	927 aa		4.17	□□□□□ -1.74
YRO2	YBR054W	FRE5	Q08908	694 aa		4.17	□□□□□ -1.74
YRO2	YBR054W	ATG11	Q12527	1178 aa		4.17	□□□□□ -1.74
YRO2	YBR054W	AIM44	Q99299	758 aa		4.17	□□□□□ -1.74
YRO2	YBR054W	LAT1	P12695	482 aa	Known RBP	4.16	□□□□□ -1.74
YRO2	YBR054W	CCR4	P31384	837 aa	Known RBP	4.16	□□□□□ -1.74
YRO2	YBR054W	DOS2	P54858	310 aa		4.16	□□□□□ -1.74
YRO2	YBR054W	ADY4	Q05955	493 aa		4.16	□□□□□ -1.74
YRO2	YBR054W	ADR1	P07248	1323 aa		4.16	□□□□□ -1.74
YRO2	YBR054W	ADE2	P21264	571 aa	Known RBP	4.15	□□□□□ -1.75
YRO2	YBR054W	APL2	P36000	726 aa	Predicted RBP	4.15	□□□□□ -1.75
YRO2	YBR054W	SDA1	P53313	767 aa	Known RBP	4.15	□□□□□ -1.75
YRO2	YBR054W	TEX1	P53851	422 aa	Known RBP	4.15	□□□□□ -1.75
YRO2	YBR054W	ARG5,6	Q01217	863 aa		4.15	□□□□□ -1.75
YRO2	YBR054W	GAD1	Q04792	585 aa		4.15	□□□□□ -1.75
YRO2	YBR054W	BAP3	P41815	604 aa		4.14	□□□□□ -1.75
YRO2	YBR054W	YJL163C	P46996	555 aa		4.14	□□□□□ -1.75
YRO2	YBR054W	YJR142W	P47173	342 aa		4.14	□□□□□ -1.75
YRO2	YBR054W	HLJ1	P48353	224 aa		4.14	□□□□□ -1.75
YRO2	YBR054W	ARP4	P80428	489 aa		4.14	□□□□□ -1.75
YRO2	YBR054W	MCM21	Q06675	368 aa		4.14	□□□□□ -1.75
YRO2	YBR054W	GUD1	Q07729	489 aa		4.14	□□□□□ -1.75
YRO2	YBR054W	YGR161W-C	Q3E744	92 aa		4.14	□□□□□ -1.75
YRO2	YBR054W	MNN4	P36044	1178 aa		4.13	□□□□□ -1.75
YRO2	YBR054W	SPC42	P36094	363 aa		4.13	□□□□□ -1.75
YRO2	YBR054W	YHR112C	P38716	378 aa		4.13	□□□□□ -1.75
YRO2	YBR054W	GID8	P40208	455 aa		4.13	□□□□□ -1.75
YRO2	YBR054W	HOS4	P40480	1083 aa		4.13	□□□□□ -1.75
YRO2	YBR054W	OMS1	Q06668	471 aa		4.13	□□□□□ -1.75
YRO2	YBR054W	OAR1	P35731	278 aa		4.12	□□□□□ -1.75
YRO2	YBR054W	TRZ1	P36159	838 aa	Predicted RBP	4.12	□□□□□ -1.75
YRO2	YBR054W	APT2	P36973	181 aa		4.12	□□□□□ -1.75
YRO2	YBR054W	PPS1	P38148	807 aa		4.12	□□□□□ -1.75
YRO2	YBR054W	BRN1	P38170	754 aa		4.12	□□□□□ -1.75
YRO2	YBR054W	LEE1	Q02799	301 aa	Known RBP	4.12	□□□□□ -1.75
YRO2	YBR054W	IRC13	Q08630	104 aa		4.12	□□□□□ -1.75
YRO2	YBR054W	ACF2	Q12168	779 aa		4.12	□□□□□ -1.75
YRO2	YBR054W	MOH1	P38191	138 aa		4.11	□□□□□ -1.75
YRO2	YBR054W	BCD1	P38772	366 aa		4.11	□□□□□ -1.75
YRO2	YBR054W	SSZ1	P38788	538 aa	Known RBP	4.11	□□□□□ -1.75
YRO2	YBR054W	CKB2	P38930	258 aa		4.11	□□□□□ -1.75
YRO2	YBR054W	DAS1	P47005	663 aa		4.11	□□□□□ -1.75
YRO2	YBR054W	YJR039W	P47107	1121 aa		4.11	□□□□□ -1.75
YRO2	YBR054W	UBC11	P52492	156 aa		4.11	□□□□□ -1.75
YRO2	YBR054W	YNR029C	P53729	429 aa	Known RBP	4.11	□□□□□ -1.75
YRO2	YBR054W	BRE5	P53741	515 aa	Known RBP	4.11	□□□□□ -1.75
YRO2	YBR054W	REC102	Q02721	264 aa		4.11	□□□□□ -1.75
YRO2	YBR054W	YMR206W	Q03695	313 aa		4.11	□□□□□ -1.75
YRO2	YBR054W	CTK1	Q03957	528 aa	Known RBP	4.11	□□□□□ -1.75
YRO2	YBR054W	HMO1	Q03973	246 aa	Known RBP	4.11	□□□□□ -1.75
YRO2	YBR054W	THI73	Q07904	523 aa		4.11	□□□□□ -1.75
YRO2	YBR054W	DCS2	Q12123	353 aa		4.11	□□□□□ -1.75
YRO2	YBR054W	APN2	P38207	520 aa		4.1	□□□□□ -1.75
YRO2	YBR054W	LYS9	P38999	446 aa		4.1	□□□□□ -1.75
YRO2	YBR054W	CCT3	P39077	534 aa	Known RBP	4.1	□□□□□ -1.75
YRO2	YBR054W	SET2	P46995	733 aa	Known RBP	4.1	□□□□□ -1.75
YRO2	YBR054W	YJR096W	P47137	282 aa		4.1	□□□□□ -1.75
YRO2	YBR054W	PMT3	P47190	753 aa		4.1	□□□□□ -1.75
YRO2	YBR054W	MTL1	P53214	551 aa		4.1	□□□□□ -1.75
YRO2	YBR054W	GPD1	Q00055	391 aa	Known RBP	4.1	□□□□□ -1.75
YRO2	YBR054W	MUK1	Q02866	612 aa		4.1	□□□□□ -1.75
YRO2	YBR054W	HRP1	Q99383	534 aa	Known RBP	4.1	□□□□□ -1.75
YRO2	YBR054W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
YRO2	YBR054W	ERG6	P25087	383 aa	Known RBP	4.09	□□□□□ -1.75
YRO2	YBR054W	HIS7	P33734	552 aa	Known RBP	4.09	□□□□□ -1.75
YRO2	YBR054W	TYS1	P36421	394 aa	Known RBP	4.09	□□□□□ -1.75
YRO2	YBR054W	AKL1	P38080	1108 aa	Known RBP	4.09	□□□□□ -1.75
YRO2	YBR054W	YHL017W	P38745	532 aa		4.09	□□□□□ -1.75
YRO2	YBR054W	CRP1	P38845	465 aa	Known RBP	4.09	□□□□□ -1.75
YRO2	YBR054W	FMP52	P40008	231 aa		4.09	□□□□□ -1.75
YRO2	YBR054W	STB4	P50104	949 aa		4.09	□□□□□ -1.75
YRO2	YBR054W	TIM44	Q01852	431 aa		4.09	□□□□□ -1.75
YRO2	YBR054W	UME1	Q03010	460 aa		4.09	□□□□□ -1.75
YRO2	YBR054W	PYC1	P11154	1178 aa	Known RBP	4.08	□□□□□ -1.76
YRO2	YBR054W	RNR1	P21524	888 aa	Known RBP	4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms