RNA–Protein interactions for RNA: YBR030W

RKM3, Transcript of Ribosomal lysine methyltransferase, yeast

Gene RKM3, Length 1,659 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RKM3	YBR030W	NAM7	P30771	971 aa	Known RBP	4.89	□□□□□ -1.63
RKM3	YBR030W	YIL092W	P40497	633 aa		4.89	□□□□□ -1.63
RKM3	YBR030W	SHR5	P41912	237 aa		4.89	□□□□□ -1.63
RKM3	YBR030W	HOL1	P53389	586 aa		4.89	□□□□□ -1.63
RKM3	YBR030W	EIS1	Q05050	843 aa	Known RBP	4.89	□□□□□ -1.63
RKM3	YBR030W	SDH5	Q08230	162 aa		4.89	□□□□□ -1.63
RKM3	YBR030W	YLR149C	Q99296	730 aa		4.89	□□□□□ -1.63
RKM3	YBR030W	YKR018C	P36114	725 aa		4.88	□□□□□ -1.63
RKM3	YBR030W	SET5	P38890	526 aa	Known RBP	4.88	□□□□□ -1.63
RKM3	YBR030W	EAF5	P39995	279 aa		4.88	□□□□□ -1.63
RKM3	YBR030W	ARC35	P53731	342 aa	Known RBP	4.88	□□□□□ -1.63
RKM3	YBR030W	HDA1	P53973	706 aa		4.88	□□□□□ -1.63
RKM3	YBR030W	VIP1	Q06685	1146 aa	Known RBP	4.88	□□□□□ -1.63
RKM3	YBR030W	YOR059C	Q08448	450 aa	Known RBP	4.88	□□□□□ -1.63
RKM3	YBR030W	ARP7	Q12406	477 aa		4.88	□□□□□ -1.63
RKM3	YBR030W	SWI6	P09959	803 aa		4.87	□□□□□ -1.63
RKM3	YBR030W	PHO3	P24031	467 aa		4.87	□□□□□ -1.63
RKM3	YBR030W	SAP190	P36123	1033 aa		4.87	□□□□□ -1.63
RKM3	YBR030W	SPC72	P39723	622 aa		4.87	□□□□□ -1.63
RKM3	YBR030W	YFL052W	P43551	465 aa		4.87	□□□□□ -1.63
RKM3	YBR030W	TPP1	Q03796	238 aa		4.87	□□□□□ -1.63
RKM3	YBR030W	PUS7	Q08647	676 aa	Known RBP	4.87	□□□□□ -1.63
RKM3	YBR030W	CWC2	Q12046	339 aa	Predicted RBP	4.87	□□□□□ -1.63
RKM3	YBR030W	KCS1	Q12494	1050 aa		4.87	□□□□□ -1.63
RKM3	YBR030W	ACE2	P21192	770 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	SAN1	P22470	610 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	TFC3	P34111	1160 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	GPT2	P36148	743 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	TAT1	P38085	619 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	RKM3	P38222	552 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	SAW1	P39735	261 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	RAD26	P40352	1085 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	RRT14	P40470	206 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	PUS4	P48567	403 aa	Known RBP	4.86	□□□□□ -1.63
RKM3	YBR030W	ARP4	P80428	489 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	SPC19	Q03954	165 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	IMH1	Q06704	911 aa	Known RBP	4.86	□□□□□ -1.63
RKM3	YBR030W	THI21	Q08975	551 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	AI3	P03877	415 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	NOT3	P06102	836 aa	Known RBP	4.86	□□□□□ -1.63
RKM3	YBR030W	CDC26	P14724	124 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	OPI1	P21957	404 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	RPC82	P32349	654 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	MUD2	P36084	527 aa	Known RBP	4.86	□□□□□ -1.63
RKM3	YBR030W	APM3	P38153	483 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	SSZ1	P38788	538 aa	Known RBP	4.86	□□□□□ -1.63
RKM3	YBR030W	PIK1	P39104	1066 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	VID28	P40547	921 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	CEP3	P40969	608 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	VTC2	P43585	828 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	MAD3	P47074	515 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	YJR039W	P47107	1121 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	UPF3	P48412	387 aa	Known RBP	4.86	□□□□□ -1.63
RKM3	YBR030W	HFM1	P51979	1187 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	PCL10	P53124	433 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	RSC58	Q07979	502 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	YOR022C	Q12204	715 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	NSI1	Q12457	570 aa		4.86	□□□□□ -1.63
RKM3	YBR030W	RPS9A	O13516	197 aa	Known RBP	4.85	□□□□□ -1.63
RKM3	YBR030W	COQ4	O13525	335 aa		4.85	□□□□□ -1.63
RKM3	YBR030W	PRC1	P00729	532 aa		4.85	□□□□□ -1.63
RKM3	YBR030W	GLN4	P13188	809 aa	Known RBP	4.85	□□□□□ -1.63
RKM3	YBR030W	NGG1	P32494	702 aa		4.85	□□□□□ -1.63
RKM3	YBR030W	FLR1	P38124	548 aa		4.85	□□□□□ -1.63
RKM3	YBR030W	YHR202W	P38887	602 aa		4.85	□□□□□ -1.63
RKM3	YBR030W	SMK1	P41808	388 aa		4.85	□□□□□ -1.63
RKM3	YBR030W	IRC5	P43610	853 aa		4.85	□□□□□ -1.63
RKM3	YBR030W	ALT1	P52893	592 aa		4.85	□□□□□ -1.63
RKM3	YBR030W	SGD1	Q06132	899 aa		4.85	□□□□□ -1.63
RKM3	YBR030W	BRE4	Q07660	1125 aa		4.85	□□□□□ -1.63
RKM3	YBR030W	XYL2	Q07993	356 aa		4.85	□□□□□ -1.63
RKM3	YBR030W	NGL1	Q08213	363 aa	Known RBP	4.85	□□□□□ -1.63
RKM3	YBR030W	YPL277C	Q08989	487 aa		4.85	□□□□□ -1.63
RKM3	YBR030W	AAC3	P18238	307 aa		4.84	□□□□□ -1.63
RKM3	YBR030W	HXT4	P32467	576 aa		4.84	□□□□□ -1.63
RKM3	YBR030W	SFA1	P32771	386 aa		4.84	□□□□□ -1.63
RKM3	YBR030W	XRS2	P33301	854 aa		4.84	□□□□□ -1.63
RKM3	YBR030W	SEG2	P34250	1132 aa		4.84	□□□□□ -1.63
RKM3	YBR030W	ECM21	P38167	1117 aa	Known RBP	4.84	□□□□□ -1.63
RKM3	YBR030W	CCZ1	P38273	704 aa		4.84	□□□□□ -1.63
RKM3	YBR030W	STL1	P39932	569 aa		4.84	□□□□□ -1.63
RKM3	YBR030W	BFA1	P47113	574 aa		4.84	□□□□□ -1.63
RKM3	YBR030W	ZIP2	P53061	704 aa		4.84	□□□□□ -1.63
RKM3	YBR030W	BRE5	P53741	515 aa	Known RBP	4.84	□□□□□ -1.63
RKM3	YBR030W	NOP15	P53927	220 aa	Predicted RBP	4.84	□□□□□ -1.63
RKM3	YBR030W	MTD1	Q02046	320 aa	Known RBP	4.84	□□□□□ -1.63
RKM3	YBR030W	YKR011C	Q02209	353 aa		4.84	□□□□□ -1.63
RKM3	YBR030W	PSF3	Q12146	194 aa		4.84	□□□□□ -1.63
RKM3	YBR030W	OSW2	Q12202	724 aa		4.84	□□□□□ -1.63
RKM3	YBR030W	ADH4	P10127	382 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	HOM3	P10869	527 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	NCP1	P16603	691 aa	Known RBP	4.83	□□□□□ -1.64
RKM3	YBR030W	PAH1	P32567	862 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	SWI3	P32591	825 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	SLC1	P33333	303 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	STE13	P33894	931 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	SDS22	P36047	338 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	SRP68	P38687	599 aa	Known RBP	4.83	□□□□□ -1.64
RKM3	YBR030W	LAM1	P38851	1228 aa		4.83	□□□□□ -1.64
RKM3	YBR030W	BEM4	P39011	633 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 126.8 ms