RNA–Protein interactions for RNA: ENST00000639167.1

NECAP1-216, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,197 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-216ENST00000639167 CCDC191Q8NCU4 936 aa12.59□□□□□ -0.39
NECAP1-216ENST00000639167 XIRP1Q702N8 1843 aaKnown RBP12.59□□□□□ -0.39
NECAP1-216ENST00000639167 RFX7Q2KHR2 1363 aa12.59□□□□□ -0.39
NECAP1-216ENST00000639167 TJP1Q07157 1748 aa12.59□□□□□ -0.39
NECAP1-216ENST00000639167 A0A0G2JLW4 131 aa12.59□□□□□ -0.39
NECAP1-216ENST00000639167 PDCP20941 246 aa12.59□□□□□ -0.39
NECAP1-216ENST00000639167 NKX1-1Q15270 411 aaPredicted RBP12.59□□□□□ -0.39
NECAP1-216ENST00000639167 CARD10Q9BWT7 1032 aa12.59□□□□□ -0.39
NECAP1-216ENST00000639167 SLAIN2Q9P270 581 aa12.59□□□□□ -0.39
NECAP1-216ENST00000639167 TFIP11Q9UBB9 837 aaKnown RBP12.59□□□□□ -0.39
NECAP1-216ENST00000639167 CCDC39Q9UFE4 941 aa12.59□□□□□ -0.39
NECAP1-216ENST00000639167 USP25Q9UHP3 1055 aa12.59□□□□□ -0.39
NECAP1-216ENST00000639167 NUP188Q5SRE5 1749 aa12.58□□□□□ -0.4
NECAP1-216ENST00000639167 A0A1B0GUL7 405 aa12.58□□□□□ -0.4
NECAP1-216ENST00000639167 PTMAP06454 111 aaKnown RBP12.58□□□□□ -0.4
NECAP1-216ENST00000639167 IFIT1P09914 478 aaKnown RBP12.58□□□□□ -0.4
NECAP1-216ENST00000639167 KRT85P78386 507 aa12.58□□□□□ -0.4
NECAP1-216ENST00000639167 BRF1Q92994 677 aa12.58□□□□□ -0.4
NECAP1-216ENST00000639167 DDX11Q96FC9 970 aa12.58□□□□□ -0.4
NECAP1-216ENST00000639167 ZKSCAN5Q9Y2L8 839 aa12.58□□□□□ -0.4
NECAP1-216ENST00000639167 SOS2Q07890 1332 aaPredicted RBP12.58□□□□□ -0.4
NECAP1-216ENST00000639167 LETM1O95202 739 aaPredicted RBP12.57□□□□□ -0.4
NECAP1-216ENST00000639167 FGD1P98174 961 aa12.57□□□□□ -0.4
NECAP1-216ENST00000639167 GTF3C6Q969F1 213 aa12.57□□□□□ -0.4
NECAP1-216ENST00000639167 GPR108Q9NPR9 543 aa12.57□□□□□ -0.4
NECAP1-216ENST00000639167 SH3TC1Q8TE82 1336 aa12.57□□□□□ -0.4
NECAP1-216ENST00000639167 UBR2Q8IWV8 1755 aa12.57□□□□□ -0.4
NECAP1-216ENST00000639167 TMOD3Q9NYL9 352 aa12.57□□□□□ -0.4
NECAP1-216ENST00000639167 PALLDQ8WX93 1383 aa12.57□□□□□ -0.4
NECAP1-216ENST00000639167 LIG1P18858 919 aa12.56□□□□□ -0.4
NECAP1-216ENST00000639167 DNAJC10Q8IXB1 793 aa12.56□□□□□ -0.4
NECAP1-216ENST00000639167 FAM184AQ8NB25 1140 aa12.56□□□□□ -0.4
NECAP1-216ENST00000639167 HELLSQ9NRZ9 838 aa12.56□□□□□ -0.4
NECAP1-216ENST00000639167 ADORA1P30542 326 aa12.56□□□□□ -0.4
NECAP1-216ENST00000639167 FOSBP53539 338 aa12.56□□□□□ -0.4
NECAP1-216ENST00000639167 SCRN1Q12765 414 aa12.56□□□□□ -0.4
NECAP1-216ENST00000639167 TCIRG1Q13488 830 aa12.56□□□□□ -0.4
NECAP1-216ENST00000639167 CCDC57Q2TAC2 916 aa12.56□□□□□ -0.4
NECAP1-216ENST00000639167 ZMYM1Q5SVZ6 1142 aa12.56□□□□□ -0.4
NECAP1-216ENST00000639167 FAM89AQ96GI7 184 aa12.56□□□□□ -0.4
NECAP1-216ENST00000639167 FUCA2Q9BTY2 467 aa12.56□□□□□ -0.4
NECAP1-216ENST00000639167 ISCA1Q9BUE6 129 aa12.56□□□□□ -0.4
NECAP1-216ENST00000639167 ZNF335Q9H4Z2 1342 aaPredicted RBP12.56□□□□□ -0.4
NECAP1-216ENST00000639167 CEP126Q9P2H0 1117 aa12.56□□□□□ -0.4
NECAP1-216ENST00000639167 ASAP1Q9ULH1 1129 aa12.56□□□□□ -0.4
NECAP1-216ENST00000639167 TNS2Q63HR2 1409 aa12.55□□□□□ -0.4
NECAP1-216ENST00000639167 MAST3O60307 1309 aa12.55□□□□□ -0.4
NECAP1-216ENST00000639167 OFD1O75665 1012 aa12.55□□□□□ -0.4
NECAP1-216ENST00000639167 FKBP4Q02790 459 aaKnown RBP eCLIP12.55□□□□□ -0.4
NECAP1-216ENST00000639167 CAMK4Q16566 473 aa12.55□□□□□ -0.4
NECAP1-216ENST00000639167 UVSSAQ2YD98 709 aa12.55□□□□□ -0.4
NECAP1-216ENST00000639167 TAF7LQ5H9L4 462 aa12.55□□□□□ -0.4
NECAP1-216ENST00000639167 SPATA32Q96LK8 384 aa12.55□□□□□ -0.4
NECAP1-216ENST00000639167 PAPPAQ13219 1627 aa12.55□□□□□ -0.4
NECAP1-216ENST00000639167 M0R2C6 588 aa12.54□□□□□ -0.4
NECAP1-216ENST00000639167 RNF113AO15541 343 aaKnown RBP12.54□□□□□ -0.4
NECAP1-216ENST00000639167 ZNF500O60304 480 aaPredicted RBP12.54□□□□□ -0.4
NECAP1-216ENST00000639167 PPFIA3O75145 1194 aa12.54□□□□□ -0.4
NECAP1-216ENST00000639167 CIAO1O76071 339 aa12.54□□□□□ -0.4
NECAP1-216ENST00000639167 ADCY5O95622 1261 aa12.54□□□□□ -0.4
NECAP1-216ENST00000639167 HSPD1P10809 573 aaKnown RBP12.54□□□□□ -0.4
NECAP1-216ENST00000639167 APOBRQ0VD83 1088 aa12.54□□□□□ -0.4
NECAP1-216ENST00000639167 TTLL5Q6EMB2 1281 aa12.54□□□□□ -0.4
NECAP1-216ENST00000639167 CHST3Q7LGC8 479 aa12.54□□□□□ -0.4
NECAP1-216ENST00000639167 SYNE4Q8N205 404 aa12.54□□□□□ -0.4
NECAP1-216ENST00000639167 NAP1L2Q9ULW6 460 aaPredicted RBP12.54□□□□□ -0.4
NECAP1-216ENST00000639167 SHANK3Q9BYB0 1731 aa12.54□□□□□ -0.4
NECAP1-216ENST00000639167 GORABQ5T7V8 394 aa12.54□□□□□ -0.4
NECAP1-216ENST00000639167 DHX32Q7L7V1 743 aaKnown RBP12.54□□□□□ -0.4
NECAP1-216ENST00000639167 PIGBQ92521 554 aa12.54□□□□□ -0.4
NECAP1-216ENST00000639167 DSCC1Q9BVC3 393 aa12.54□□□□□ -0.4
NECAP1-216ENST00000639167 E7EWF7 191 aa12.53□□□□□ -0.4
NECAP1-216ENST00000639167 H3BQV1 296 aa12.53□□□□□ -0.4
NECAP1-216ENST00000639167 CCT2P78371 535 aaKnown RBP12.53□□□□□ -0.4
NECAP1-216ENST00000639167 HSP90AB3PQ58FF7 597 aa12.53□□□□□ -0.4
NECAP1-216ENST00000639167 TTC39AQ5SRH9 613 aa12.53□□□□□ -0.4
NECAP1-216ENST00000639167 IFFO2Q5TF58 517 aa12.53□□□□□ -0.4
NECAP1-216ENST00000639167 LEO1Q8WVC0 666 aaPredicted RBP12.53□□□□□ -0.4
NECAP1-216ENST00000639167 ATG3Q9NT62 314 aa12.53□□□□□ -0.4
NECAP1-216ENST00000639167 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.53□□□□□ -0.4
NECAP1-216ENST00000639167 ELP1O95163 1332 aa12.53□□□□□ -0.4
NECAP1-216ENST00000639167 GOLGA6L4A6NEF3 574 aa12.53□□□□□ -0.4
NECAP1-216ENST00000639167 GPTP24298 496 aa12.53□□□□□ -0.4
NECAP1-216ENST00000639167 RESTQ13127 1097 aa12.53□□□□□ -0.4
NECAP1-216ENST00000639167 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.53□□□□□ -0.4
NECAP1-216ENST00000639167 KIF6Q6ZMV9 814 aa12.53□□□□□ -0.4
NECAP1-216ENST00000639167 OSBP2Q969R2 916 aa12.53□□□□□ -0.4
NECAP1-216ENST00000639167 XAGE2Q96GT9 111 aa12.53□□□□□ -0.4
NECAP1-216ENST00000639167 ZNF830Q96NB3 372 aaPredicted RBP12.53□□□□□ -0.4
NECAP1-216ENST00000639167 TOGARAM1Q9Y4F4 1720 aa12.53□□□□□ -0.4
NECAP1-216ENST00000639167 PFKFB2O60825 505 aa12.52□□□□□ -0.4
NECAP1-216ENST00000639167 BRD2P25440 801 aaKnown RBP12.52□□□□□ -0.4
NECAP1-216ENST00000639167 SCARF1Q14162 830 aa12.52□□□□□ -0.4
NECAP1-216ENST00000639167 WASHC4Q2M389 1173 aa12.52□□□□□ -0.4
NECAP1-216ENST00000639167 CCDC158Q5M9N0 1113 aa12.52□□□□□ -0.4
NECAP1-216ENST00000639167 CKAP2LQ8IYA6 745 aa12.52□□□□□ -0.4
NECAP1-216ENST00000639167 SCAND2PQ9GZW5 306 aaPredicted RBP12.52□□□□□ -0.4
NECAP1-216ENST00000639167 NUP62CLQ9H1M0 184 aa12.52□□□□□ -0.4
NECAP1-216ENST00000639167 NCOA5Q9HCD5 579 aaKnown RBP12.52□□□□□ -0.4
NECAP1-216ENST00000639167 DACT1Q9NYF0 836 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms