RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 UBR3Q6ZT12 1888 aa26.28■■□□□ 1.8
SCARB2-212ENST00000638663 MROH5Q6ZUA9 1318 aa26.28■■□□□ 1.8
SCARB2-212ENST00000638663 PDE8BO95263 885 aa26.27■■□□□ 1.8
SCARB2-212ENST00000638663 APBA3O96018 575 aa26.27■■□□□ 1.8
SCARB2-212ENST00000638663 IGHMBP2P38935 993 aaKnown RBP26.27■■□□□ 1.8
SCARB2-212ENST00000638663 NMIQ13287 307 aaPredicted RBP26.27■■□□□ 1.8
SCARB2-212ENST00000638663 CCDC158Q5M9N0 1113 aa26.27■■□□□ 1.8
SCARB2-212ENST00000638663 SLC10A5Q5PT55 438 aa26.27■■□□□ 1.8
SCARB2-212ENST00000638663 IFIT1P09914 478 aaKnown RBP26.27■■□□□ 1.8
SCARB2-212ENST00000638663 SF3B3Q15393 1217 aaKnown RBP26.27■■□□□ 1.8
SCARB2-212ENST00000638663 POTEAQ6S8J7 498 aa26.27■■□□□ 1.8
SCARB2-212ENST00000638663 TPTE2Q6XPS3 522 aa26.27■■□□□ 1.8
SCARB2-212ENST00000638663 DDX46Q7L014 1031 aaKnown RBP26.27■■□□□ 1.8
SCARB2-212ENST00000638663 HSCBQ8IWL3 235 aa26.27■■□□□ 1.8
SCARB2-212ENST00000638663 HELBQ8NG08 1087 aaPredicted RBP26.27■■□□□ 1.8
SCARB2-212ENST00000638663 FAM227BQ96M60 508 aa26.27■■□□□ 1.8
SCARB2-212ENST00000638663 MCCP23508 829 aa26.26■■□□□ 1.79
SCARB2-212ENST00000638663 TTC39AQ5SRH9 613 aa26.26■■□□□ 1.79
SCARB2-212ENST00000638663 CCDC24Q8N4L8 307 aa26.26■■□□□ 1.79
SCARB2-212ENST00000638663 SNX21Q969T3 373 aa26.26■■□□□ 1.79
SCARB2-212ENST00000638663 SSFA2P28290 1259 aa26.26■■□□□ 1.79
SCARB2-212ENST00000638663 RABEP1Q15276 862 aa26.26■■□□□ 1.79
SCARB2-212ENST00000638663 KIAA1211Q6ZU35 1233 aa26.26■■□□□ 1.79
SCARB2-212ENST00000638663 FBXO41Q8TF61 875 aa26.26■■□□□ 1.79
SCARB2-212ENST00000638663 LSG1Q9H089 658 aaKnown RBP26.26■■□□□ 1.79
SCARB2-212ENST00000638663 GOLIM4O00461 696 aa26.25■■□□□ 1.79
SCARB2-212ENST00000638663 NFIXQ14938 502 aa26.25■■□□□ 1.79
SCARB2-212ENST00000638663 PAG1Q9NWQ8 432 aa26.25■■□□□ 1.79
SCARB2-212ENST00000638663 PLSCR1O15162 318 aa26.24■■□□□ 1.79
SCARB2-212ENST00000638663 EPB41L2O43491 1005 aaKnown RBP26.24■■□□□ 1.79
SCARB2-212ENST00000638663 CDC5LQ99459 802 aaKnown RBP26.24■■□□□ 1.79
SCARB2-212ENST00000638663 A0A0D9SFI3 127 aa26.24■■□□□ 1.79
SCARB2-212ENST00000638663 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.24■■□□□ 1.79
SCARB2-212ENST00000638663 RAD50Q92878 1312 aa26.23■■□□□ 1.79
SCARB2-212ENST00000638663 NPHP1O15259 732 aa26.23■■□□□ 1.79
SCARB2-212ENST00000638663 PALD1Q9ULE6 856 aa26.23■■□□□ 1.79
SCARB2-212ENST00000638663 SPEF2Q9C093 1822 aa26.23■■□□□ 1.79
SCARB2-212ENST00000638663 COL4A1P02462 1669 aa26.23■■□□□ 1.79
SCARB2-212ENST00000638663 CARMIL3Q8ND23 1372 aa26.23■■□□□ 1.79
SCARB2-212ENST00000638663 CD2BP2O95400 341 aaKnown RBP26.22■■□□□ 1.79
SCARB2-212ENST00000638663 PUM3Q15397 648 aaKnown RBP26.22■■□□□ 1.79
SCARB2-212ENST00000638663 KBTBD3Q8NAB2 608 aa26.22■■□□□ 1.79
SCARB2-212ENST00000638663 NLRP3Q96P20 1036 aa26.22■■□□□ 1.79
SCARB2-212ENST00000638663 TAF5LO75529 589 aa26.22■■□□□ 1.79
SCARB2-212ENST00000638663 GYS1P13807 737 aa26.22■■□□□ 1.79
SCARB2-212ENST00000638663 CASZ1Q86V15 1759 aa26.21■■□□□ 1.79
SCARB2-212ENST00000638663 ANKRD18AQ8IVF6 992 aa26.21■■□□□ 1.79
SCARB2-212ENST00000638663 LPIN2Q92539 896 aa26.21■■□□□ 1.79
SCARB2-212ENST00000638663 SNRKQ9NRH2 765 aa26.21■■□□□ 1.79
SCARB2-212ENST00000638663 RFX7Q2KHR2 1363 aa26.21■■□□□ 1.79
SCARB2-212ENST00000638663 FGFR2P21802 821 aa26.2■■□□□ 1.79
SCARB2-212ENST00000638663 HMGB2P26583 209 aaKnown RBP26.2■■□□□ 1.79
SCARB2-212ENST00000638663 FKBP4Q02790 459 aaKnown RBP eCLIP26.2■■□□□ 1.79
SCARB2-212ENST00000638663 CHGBP05060 677 aa26.2■■□□□ 1.78
SCARB2-212ENST00000638663 HSPA4P34932 840 aa26.2■■□□□ 1.78
SCARB2-212ENST00000638663 PTH1RQ03431 593 aa26.2■■□□□ 1.78
SCARB2-212ENST00000638663 SCARF1Q14162 830 aa26.2■■□□□ 1.78
SCARB2-212ENST00000638663 SNAP23O00161 211 aa26.19■■□□□ 1.78
SCARB2-212ENST00000638663 SPRYD3Q8NCJ5 442 aa26.19■■□□□ 1.78
SCARB2-212ENST00000638663 ANTXR1Q9H6X2 564 aa26.19■■□□□ 1.78
SCARB2-212ENST00000638663 ANAPC15P60006 121 aa26.18■■□□□ 1.78
SCARB2-212ENST00000638663 CHRNDQ07001 517 aa26.18■■□□□ 1.78
SCARB2-212ENST00000638663 SLC5A1P13866 664 aa26.18■■□□□ 1.78
SCARB2-212ENST00000638663 ZNF827Q17R98 1081 aa26.18■■□□□ 1.78
SCARB2-212ENST00000638663 CNBD1Q8NA66 436 aa26.18■■□□□ 1.78
SCARB2-212ENST00000638663 TFCP2L1Q9NZI6 479 aa26.18■■□□□ 1.78
SCARB2-212ENST00000638663 TAF1P21675 1872 aa26.17■■□□□ 1.78
SCARB2-212ENST00000638663 MED23Q9ULK4 1368 aa26.17■■□□□ 1.78
SCARB2-212ENST00000638663 CCDC171Q6TFL3 1326 aa26.17■■□□□ 1.78
SCARB2-212ENST00000638663 CELF1Q92879 486 aaKnown RBP26.17■■□□□ 1.78
SCARB2-212ENST00000638663 SLKQ9H2G2 1235 aaPredicted RBP26.17■■□□□ 1.78
SCARB2-212ENST00000638663 PI16Q6UXB8 463 aa26.16■■□□□ 1.78
SCARB2-212ENST00000638663 ZNF589Q86UQ0 364 aaPredicted RBP26.16■■□□□ 1.78
SCARB2-212ENST00000638663 ZAP70P43403 619 aa26.16■■□□□ 1.78
SCARB2-212ENST00000638663 PHKA1P46020 1223 aa26.16■■□□□ 1.78
SCARB2-212ENST00000638663 CCDC102BQ68D86 513 aa26.16■■□□□ 1.78
SCARB2-212ENST00000638663 BSDC1Q9NW68 430 aaPredicted RBP26.16■■□□□ 1.78
SCARB2-212ENST00000638663 MCAMP43121 646 aa26.15■■□□□ 1.78
SCARB2-212ENST00000638663 AKT1S1Q96B36 256 aa26.14■■□□□ 1.78
SCARB2-212ENST00000638663 ZNF512BQ96KM6 892 aaPredicted RBP26.14■■□□□ 1.78
SCARB2-212ENST00000638663 K7ELQ4 463 aaPredicted RBP26.14■■□□□ 1.77
SCARB2-212ENST00000638663 SEC62Q99442 399 aaKnown RBP26.14■■□□□ 1.77
SCARB2-212ENST00000638663 ARAP2Q8WZ64 1704 aa26.13■■□□□ 1.77
SCARB2-212ENST00000638663 TNRC6CQ9HCJ0 1690 aaKnown RBP26.13■■□□□ 1.77
SCARB2-212ENST00000638663 ST18O60284 1047 aa26.13■■□□□ 1.77
SCARB2-212ENST00000638663 TM4SF1P30408 202 aa26.13■■□□□ 1.77
SCARB2-212ENST00000638663 SLFNL1Q499Z3 407 aa26.13■■□□□ 1.77
SCARB2-212ENST00000638663 PRR5LQ6MZQ0 368 aa26.13■■□□□ 1.77
SCARB2-212ENST00000638663 IL17RAQ96F46 866 aa26.13■■□□□ 1.77
SCARB2-212ENST00000638663 RPS8P62241 208 aaKnown RBP26.12■■□□□ 1.77
SCARB2-212ENST00000638663 TNS1Q9HBL0 1735 aaKnown RBP26.12■■□□□ 1.77
SCARB2-212ENST00000638663 SNX14Q9Y5W7 946 aa26.12■■□□□ 1.77
SCARB2-212ENST00000638663 SERPINB2P05120 415 aa26.12■■□□□ 1.77
SCARB2-212ENST00000638663 UQCRFS1P1P0C7P4 283 aa26.12■■□□□ 1.77
SCARB2-212ENST00000638663 ARID4AP29374 1257 aaPredicted RBP26.12■■□□□ 1.77
SCARB2-212ENST00000638663 NEK4P51957 841 aa26.12■■□□□ 1.77
SCARB2-212ENST00000638663 MCMDC2Q4G0Z9 681 aa26.12■■□□□ 1.77
SCARB2-212ENST00000638663 CCDC129Q6ZRS4 1044 aa26.12■■□□□ 1.77
SCARB2-212ENST00000638663 TICAM2Q86XR7 235 aa26.12■■□□□ 1.77
SCARB2-212ENST00000638663 RASEFQ8IZ41 740 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms