RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 BMS1Q14692 1282 aaKnown RBP6.62□□□□□ -1.35
CDRT1-208ENST00000630868 USPL1Q5W0Q7 1092 aa6.62□□□□□ -1.35
CDRT1-208ENST00000630868 TREML1Q86YW5 311 aa6.62□□□□□ -1.35
CDRT1-208ENST00000630868 CCDC116Q8IYX3 515 aa6.62□□□□□ -1.35
CDRT1-208ENST00000630868 CNKSR1Q969H4 720 aa6.62□□□□□ -1.35
CDRT1-208ENST00000630868 GPATCH3Q96I76 525 aa6.62□□□□□ -1.35
CDRT1-208ENST00000630868 OSBPL7Q9BZF2 842 aa6.62□□□□□ -1.35
CDRT1-208ENST00000630868 PHACTR1Q9C0D0 580 aa6.62□□□□□ -1.35
CDRT1-208ENST00000630868 C12orf49Q9H741 205 aa6.62□□□□□ -1.35
CDRT1-208ENST00000630868 GGT7Q9UJ14 662 aa6.62□□□□□ -1.35
CDRT1-208ENST00000630868 ZNF232Q9UNY5 417 aa6.62□□□□□ -1.35
CDRT1-208ENST00000630868 PARP3Q9Y6F1 533 aa6.62□□□□□ -1.35
CDRT1-208ENST00000630868 SUPT6HQ7KZ85 1726 aaKnown RBP6.62□□□□□ -1.35
CDRT1-208ENST00000630868 ALKQ9UM73 1620 aa6.61□□□□□ -1.35
CDRT1-208ENST00000630868 FYCO1Q9BQS8 1478 aa6.61□□□□□ -1.35
CDRT1-208ENST00000630868 SHANK2Q9UPX8 1470 aa6.61□□□□□ -1.35
CDRT1-208ENST00000630868 TOM1O60784 492 aa6.61□□□□□ -1.35
CDRT1-208ENST00000630868 TCEAL1Q15170 157 aa6.61□□□□□ -1.35
CDRT1-208ENST00000630868 C8orf34Q49A92 452 aa6.61□□□□□ -1.35
CDRT1-208ENST00000630868 ZNF746Q6NUN9 644 aaPredicted RBP6.61□□□□□ -1.35
CDRT1-208ENST00000630868 NBPF15Q8N660 670 aa6.61□□□□□ -1.35
CDRT1-208ENST00000630868 L3MBTL2Q969R5 705 aa6.61□□□□□ -1.35
CDRT1-208ENST00000630868 ESYT1Q9BSJ8 1104 aa6.61□□□□□ -1.35
CDRT1-208ENST00000630868 FHDC1Q9C0D6 1143 aaPredicted RBP6.61□□□□□ -1.35
CDRT1-208ENST00000630868 DNAJC25Q9H1X3 360 aa6.61□□□□□ -1.35
CDRT1-208ENST00000630868 BCS1LQ9Y276 419 aa6.61□□□□□ -1.35
CDRT1-208ENST00000630868 SRCAPQ6ZRS2 3230 aa6.61□□□□□ -1.35
CDRT1-208ENST00000630868 FAM135AQ9P2D6 1515 aa6.6□□□□□ -1.35
CDRT1-208ENST00000630868 USP31Q70CQ4 1352 aa6.6□□□□□ -1.35
CDRT1-208ENST00000630868 CPNE3O75131 537 aaKnown RBP6.6□□□□□ -1.35
CDRT1-208ENST00000630868 STK10O94804 968 aaKnown RBP6.6□□□□□ -1.35
CDRT1-208ENST00000630868 ATF4P18848 351 aaPredicted RBP6.6□□□□□ -1.35
CDRT1-208ENST00000630868 HNRNPMP52272 730 aaKnown RBP eCLIP6.6□□□□□ -1.35
CDRT1-208ENST00000630868 PAK2Q13177 524 aa6.6□□□□□ -1.35
CDRT1-208ENST00000630868 KDF1Q8NAX2 398 aaPredicted RBP6.6□□□□□ -1.35
CDRT1-208ENST00000630868 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.6□□□□□ -1.35
CDRT1-208ENST00000630868 CABP1Q9NZU7 370 aa6.6□□□□□ -1.35
CDRT1-208ENST00000630868 DMGDHQ9UI17 866 aaKnown RBP6.6□□□□□ -1.35
CDRT1-208ENST00000630868 FOXD3Q9UJU5 478 aaPredicted RBP6.6□□□□□ -1.35
CDRT1-208ENST00000630868 VWDEQ8N2E2 1590 aa6.6□□□□□ -1.35
CDRT1-208ENST00000630868 MED14O60244 1454 aa6.6□□□□□ -1.35
CDRT1-208ENST00000630868 PZPP20742 1482 aa6.6□□□□□ -1.35
CDRT1-208ENST00000630868 MBD5Q9P267 1494 aa6.6□□□□□ -1.35
CDRT1-208ENST00000630868 RTEL1-TNFRSF6BF6WH68 1400 aa6.59□□□□□ -1.35
CDRT1-208ENST00000630868 ADGBQ8N7X0 1667 aa6.59□□□□□ -1.35
CDRT1-208ENST00000630868 RNF223E7ERA6 249 aa6.59□□□□□ -1.35
CDRT1-208ENST00000630868 ADH1CP00326 375 aa6.59□□□□□ -1.35
CDRT1-208ENST00000630868 GGT6Q6P531 493 aa6.59□□□□□ -1.35
CDRT1-208ENST00000630868 ERMP1Q7Z2K6 904 aa6.59□□□□□ -1.35
CDRT1-208ENST00000630868 EPS8L3Q8TE67 593 aaKnown RBP6.59□□□□□ -1.35
CDRT1-208ENST00000630868 SPACA7Q96KW9 195 aa6.59□□□□□ -1.35
CDRT1-208ENST00000630868 COPRSQ9NQ92 184 aa6.59□□□□□ -1.35
CDRT1-208ENST00000630868 POLR1AO95602 1720 aaPredicted RBP6.59□□□□□ -1.36
CDRT1-208ENST00000630868 DHX29Q7Z478 1369 aaKnown RBP6.58□□□□□ -1.36
CDRT1-208ENST00000630868 TNRQ92752 1358 aa6.58□□□□□ -1.36
CDRT1-208ENST00000630868 ADH1AP07327 375 aa6.58□□□□□ -1.36
CDRT1-208ENST00000630868 PCSK2P16519 638 aa6.58□□□□□ -1.36
CDRT1-208ENST00000630868 PIP4K2BP78356 416 aa6.58□□□□□ -1.36
CDRT1-208ENST00000630868 CLN3Q13286 438 aa6.58□□□□□ -1.36
CDRT1-208ENST00000630868 RC3H1Q5TC82 1133 aaKnown RBP6.58□□□□□ -1.36
CDRT1-208ENST00000630868 SOGA3Q5TF21 947 aa6.58□□□□□ -1.36
CDRT1-208ENST00000630868 TRIM52Q96A61 297 aa6.58□□□□□ -1.36
CDRT1-208ENST00000630868 CCDC74AQ96AQ1 378 aa6.58□□□□□ -1.36
CDRT1-208ENST00000630868 GPRASP2Q96D09 838 aa6.58□□□□□ -1.36
CDRT1-208ENST00000630868 KLRG1Q96E93 195 aa6.58□□□□□ -1.36
CDRT1-208ENST00000630868 CFDP1Q9UEE9 299 aaPredicted RBP6.58□□□□□ -1.36
CDRT1-208ENST00000630868 MRPL42Q9Y6G3 142 aaKnown RBP6.58□□□□□ -1.36
CDRT1-208ENST00000630868 V9GY48 417 aaPredicted RBP6.58□□□□□ -1.36
CDRT1-208ENST00000630868 NLRP1Q9C000 1473 aa6.58□□□□□ -1.36
CDRT1-208ENST00000630868 DEPDC5O75140 1603 aa6.58□□□□□ -1.36
CDRT1-208ENST00000630868 USP17L7P0C7H9 530 aa6.57□□□□□ -1.36
CDRT1-208ENST00000630868 TXLNAP40222 546 aa6.57□□□□□ -1.36
CDRT1-208ENST00000630868 PTPN5P54829 565 aa6.57□□□□□ -1.36
CDRT1-208ENST00000630868 SERINC3Q13530 473 aa6.57□□□□□ -1.36
CDRT1-208ENST00000630868 TAF1CQ15572 869 aaPredicted RBP6.57□□□□□ -1.36
CDRT1-208ENST00000630868 LHX8Q68G74 356 aa6.57□□□□□ -1.36
CDRT1-208ENST00000630868 ANKLE2Q86XL3 938 aa6.57□□□□□ -1.36
CDRT1-208ENST00000630868 VPS37DQ86XT2 251 aa6.57□□□□□ -1.36
CDRT1-208ENST00000630868 MPNDQ8N594 471 aa6.57□□□□□ -1.36
CDRT1-208ENST00000630868 RGS17Q9UGC6 210 aaPredicted RBP6.57□□□□□ -1.36
CDRT1-208ENST00000630868 MIA2Q96PC5 1412 aa6.57□□□□□ -1.36
CDRT1-208ENST00000630868 CCNB3Q8WWL7 1395 aa6.57□□□□□ -1.36
CDRT1-208ENST00000630868 KDM5DQ9BY66 1539 aa6.56□□□□□ -1.36
CDRT1-208ENST00000630868 SIAH2O43255 324 aa6.56□□□□□ -1.36
CDRT1-208ENST00000630868 TNFRSF21O75509 655 aa6.56□□□□□ -1.36
CDRT1-208ENST00000630868 ST13P50502 369 aaKnown RBP6.56□□□□□ -1.36
CDRT1-208ENST00000630868 CENPCQ03188 943 aa6.56□□□□□ -1.36
CDRT1-208ENST00000630868 NR5A1Q13285 461 aa6.56□□□□□ -1.36
CDRT1-208ENST00000630868 PGPEP1Q9NXJ5 209 aa6.56□□□□□ -1.36
CDRT1-208ENST00000630868 FAM8A1Q9UBU6 413 aa6.56□□□□□ -1.36
CDRT1-208ENST00000630868 NPHP4O75161 1426 aaPredicted RBP6.56□□□□□ -1.36
CDRT1-208ENST00000630868 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.56□□□□□ -1.36
CDRT1-208ENST00000630868 LRRC7Q96NW7 1537 aa6.55□□□□□ -1.36
CDRT1-208ENST00000630868 ZNF644Q9H582 1327 aaPredicted RBP6.55□□□□□ -1.36
CDRT1-208ENST00000630868 RAB11FIP3O75154 756 aa6.55□□□□□ -1.36
CDRT1-208ENST00000630868 NEFLP07196 543 aa6.55□□□□□ -1.36
CDRT1-208ENST00000630868 CBLBQ13191 982 aa6.55□□□□□ -1.36
CDRT1-208ENST00000630868 TRIP4Q15650 581 aaPredicted RBP6.55□□□□□ -1.36
CDRT1-208ENST00000630868 LCE2DQ5TA82 110 aaPredicted RBP6.55□□□□□ -1.36
CDRT1-208ENST00000630868 PPARGC1BQ86YN6 1023 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms