RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 CCDC158Q5M9N0 1113 aa18.8■□□□□ 0.6
NR1H3-235ENST00000616973 ZMYM1Q5SVZ6 1142 aa18.8■□□□□ 0.6
NR1H3-235ENST00000616973 AK7Q96M32 723 aa18.8■□□□□ 0.6
NR1H3-235ENST00000616973 CCDC87Q9NVE4 849 aa18.8■□□□□ 0.6
NR1H3-235ENST00000616973 AKAP11Q9UKA4 1901 aa18.8■□□□□ 0.6
NR1H3-235ENST00000616973 IRS4O14654 1257 aaPredicted RBP18.8■□□□□ 0.6
NR1H3-235ENST00000616973 PDE8AO60658 829 aa18.8■□□□□ 0.6
NR1H3-235ENST00000616973 LARGE1O95461 756 aa18.8■□□□□ 0.6
NR1H3-235ENST00000616973 INTS5Q6P9B9 1019 aaKnown RBP18.8■□□□□ 0.6
NR1H3-235ENST00000616973 TRMT112Q9UI30 125 aaKnown RBP18.8■□□□□ 0.6
NR1H3-235ENST00000616973 RIPOR2Q9Y4F9 1068 aa18.8■□□□□ 0.6
NR1H3-235ENST00000616973 ARAP2Q8WZ64 1704 aa18.79■□□□□ 0.6
NR1H3-235ENST00000616973 ANKRD18BA2A2Z9 1011 aa18.79■□□□□ 0.6
NR1H3-235ENST00000616973 SYNE4Q8N205 404 aa18.79■□□□□ 0.6
NR1H3-235ENST00000616973 XAGE2Q96GT9 111 aa18.79■□□□□ 0.6
NR1H3-235ENST00000616973 SMC3Q9UQE7 1217 aa18.79■□□□□ 0.6
NR1H3-235ENST00000616973 XRCC6P12956 609 aaKnown RBP eCLIP18.78■□□□□ 0.6
NR1H3-235ENST00000616973 ITGA6P23229 1130 aa18.78■□□□□ 0.6
NR1H3-235ENST00000616973 SEC62Q99442 399 aaKnown RBP18.78■□□□□ 0.6
NR1H3-235ENST00000616973 DSCC1Q9BVC3 393 aa18.78■□□□□ 0.6
NR1H3-235ENST00000616973 BRPF3Q9ULD4 1205 aa18.78■□□□□ 0.6
NR1H3-235ENST00000616973 BCORQ6W2J9 1755 aa18.78■□□□□ 0.6
NR1H3-235ENST00000616973 DDX60Q8IY21 1712 aaKnown RBP18.78■□□□□ 0.6
NR1H3-235ENST00000616973 NUTM2BA6NNL0 878 aaPredicted RBP18.78■□□□□ 0.6
NR1H3-235ENST00000616973 NUTM2EB1AL46 878 aaPredicted RBP18.78■□□□□ 0.6
NR1H3-235ENST00000616973 PRPF40AO75400 957 aaKnown RBP18.78■□□□□ 0.6
NR1H3-235ENST00000616973 LRRFIP1Q32MZ4 808 aaKnown RBP18.78■□□□□ 0.6
NR1H3-235ENST00000616973 NUTM2AQ8IVF1 878 aaPredicted RBP18.78■□□□□ 0.6
NR1H3-235ENST00000616973 GREM2Q9H772 168 aa18.78■□□□□ 0.6
NR1H3-235ENST00000616973 TBC1D2BQ9UPU7 963 aa18.78■□□□□ 0.6
NR1H3-235ENST00000616973 CCDC9Q9Y3X0 531 aaKnown RBP18.78■□□□□ 0.6
NR1H3-235ENST00000616973 UBN2Q6ZU65 1347 aa18.78■□□□□ 0.6
NR1H3-235ENST00000616973 LOC102724428A0A0B4J2F2 783 aa18.77■□□□□ 0.6
NR1H3-235ENST00000616973 RNF113AO15541 343 aaKnown RBP18.77■□□□□ 0.6
NR1H3-235ENST00000616973 PDIA4P13667 645 aaKnown RBP18.77■□□□□ 0.6
NR1H3-235ENST00000616973 ATP6V1AP38606 617 aa18.77■□□□□ 0.6
NR1H3-235ENST00000616973 SIK1P57059 783 aa18.77■□□□□ 0.6
NR1H3-235ENST00000616973 ME3Q16798 604 aa18.77■□□□□ 0.6
NR1H3-235ENST00000616973 TTC39AQ5SRH9 613 aa18.77■□□□□ 0.6
NR1H3-235ENST00000616973 LARP6Q9BRS8 491 aaKnown RBP18.77■□□□□ 0.6
NR1H3-235ENST00000616973 CRKLP46109 303 aaKnown RBP18.76■□□□□ 0.59
NR1H3-235ENST00000616973 CCDC129Q6ZRS4 1044 aa18.76■□□□□ 0.59
NR1H3-235ENST00000616973 CCDC83Q8IWF9 413 aa18.76■□□□□ 0.59
NR1H3-235ENST00000616973 SMARCC1Q92922 1105 aaPredicted RBP18.76■□□□□ 0.59
NR1H3-235ENST00000616973 GRPEL1Q9HAV7 217 aa18.76■□□□□ 0.59
NR1H3-235ENST00000616973 TPCN1Q9ULQ1 816 aa18.76■□□□□ 0.59
NR1H3-235ENST00000616973 TAF6LQ9Y6J9 622 aa18.76■□□□□ 0.59
NR1H3-235ENST00000616973 STX6O43752 255 aa18.76■□□□□ 0.59
NR1H3-235ENST00000616973 CHGBP05060 677 aa18.76■□□□□ 0.59
NR1H3-235ENST00000616973 ZSCAN22P10073 491 aaPredicted RBP18.76■□□□□ 0.59
NR1H3-235ENST00000616973 ADORA1P30542 326 aa18.76■□□□□ 0.59
NR1H3-235ENST00000616973 ST3GAL1Q11201 340 aa18.76■□□□□ 0.59
NR1H3-235ENST00000616973 GORABQ5T7V8 394 aa18.76■□□□□ 0.59
NR1H3-235ENST00000616973 FOXD4L5Q5VV16 416 aaPredicted RBP18.76■□□□□ 0.59
NR1H3-235ENST00000616973 LDHAL6AQ6ZMR3 332 aa18.76■□□□□ 0.59
NR1H3-235ENST00000616973 FOXD4L4Q8WXT5 416 aaPredicted RBP18.76■□□□□ 0.59
NR1H3-235ENST00000616973 ACSBG1Q96GR2 724 aa18.76■□□□□ 0.59
NR1H3-235ENST00000616973 ZNF512BQ96KM6 892 aaPredicted RBP18.76■□□□□ 0.59
NR1H3-235ENST00000616973 CCDC85AQ96PX6 553 aaPredicted RBP18.76■□□□□ 0.59
NR1H3-235ENST00000616973 NEK1Q96PY6 1258 aa18.76■□□□□ 0.59
NR1H3-235ENST00000616973 ZFYP08048 801 aaPredicted RBP18.75■□□□□ 0.59
NR1H3-235ENST00000616973 SYT1P21579 422 aa18.75■□□□□ 0.59
NR1H3-235ENST00000616973 ATP2B3Q16720 1220 aa18.75■□□□□ 0.59
NR1H3-235ENST00000616973 METTL24Q5JXM2 366 aa18.75■□□□□ 0.59
NR1H3-235ENST00000616973 MBD3O95983 291 aa18.74■□□□□ 0.59
NR1H3-235ENST00000616973 CYP21A2P08686 494 aa18.74■□□□□ 0.59
NR1H3-235ENST00000616973 ZNF445P59923 1031 aa18.74■□□□□ 0.59
NR1H3-235ENST00000616973 TOB2Q14106 344 aaPredicted RBP18.74■□□□□ 0.59
NR1H3-235ENST00000616973 VGLL2Q8N8G2 317 aa18.74■□□□□ 0.59
NR1H3-235ENST00000616973 GPT2Q8TD30 523 aa18.74■□□□□ 0.59
NR1H3-235ENST00000616973 CAMTA2O94983 1202 aa18.74■□□□□ 0.59
NR1H3-235ENST00000616973 GJB2P29033 226 aa18.74■□□□□ 0.59
NR1H3-235ENST00000616973 ITPK1Q13572 414 aa18.74■□□□□ 0.59
NR1H3-235ENST00000616973 GAS2L3Q86XJ1 694 aa18.74■□□□□ 0.59
NR1H3-235ENST00000616973 MAST3O60307 1309 aa18.73■□□□□ 0.59
NR1H3-235ENST00000616973 HMGB1P09429 215 aaKnown RBP18.73■□□□□ 0.59
NR1H3-235ENST00000616973 COL9A3Q14050 684 aaPredicted RBP18.73■□□□□ 0.59
NR1H3-235ENST00000616973 PARP10Q53GL7 1025 aa18.73■□□□□ 0.59
NR1H3-235ENST00000616973 CNNM1Q9NRU3 951 aa18.73■□□□□ 0.59
NR1H3-235ENST00000616973 PIP4K2BP78356 416 aa18.72■□□□□ 0.59
NR1H3-235ENST00000616973 TMEM87AQ8NBN3 555 aa18.72■□□□□ 0.59
NR1H3-235ENST00000616973 ATP6V1DQ9Y5K8 247 aa18.72■□□□□ 0.59
NR1H3-235ENST00000616973 HSPD1P10809 573 aaKnown RBP18.72■□□□□ 0.59
NR1H3-235ENST00000616973 FKBP4Q02790 459 aaKnown RBP eCLIP18.72■□□□□ 0.59
NR1H3-235ENST00000616973 SUSD4Q5VX71 490 aa18.72■□□□□ 0.59
NR1H3-235ENST00000616973 CAVIN1Q6NZI2 390 aaKnown RBP18.72■□□□□ 0.59
NR1H3-235ENST00000616973 CHAMP1Q96JM3 812 aa18.72■□□□□ 0.59
NR1H3-235ENST00000616973 PDE8BO95263 885 aa18.71■□□□□ 0.59
NR1H3-235ENST00000616973 F13A1P00488 732 aa18.71■□□□□ 0.59
NR1H3-235ENST00000616973 VPS72Q15906 364 aa18.71■□□□□ 0.59
NR1H3-235ENST00000616973 UTP14AQ9BVJ6 771 aaKnown RBP18.71■□□□□ 0.59
NR1H3-235ENST00000616973 BCL9LQ86UU0 1499 aa18.71■□□□□ 0.59
NR1H3-235ENST00000616973 MYO5AQ9Y4I1 1855 aaKnown RBP18.71■□□□□ 0.59
NR1H3-235ENST00000616973 RTL9Q8NET4 1388 aa18.71■□□□□ 0.59
NR1H3-235ENST00000616973 MROH5Q6ZUA9 1318 aa18.71■□□□□ 0.59
NR1H3-235ENST00000616973 HSP90B1P14625 803 aaKnown RBP18.7■□□□□ 0.58
NR1H3-235ENST00000616973 NCLP19338 710 aaKnown RBP18.7■□□□□ 0.58
NR1H3-235ENST00000616973 ZSCAN23Q3MJ62 389 aa18.7■□□□□ 0.58
NR1H3-235ENST00000616973 NECAB1Q8N987 351 aa18.7■□□□□ 0.58
NR1H3-235ENST00000616973 CASZ1Q86V15 1759 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms