RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 SYNE4Q8N205 404 aa15.7■□□□□ 0.1
FOXN3-219ENST00000615335 CCDC39Q9UFE4 941 aa15.7■□□□□ 0.1
FOXN3-219ENST00000615335 GYS1P13807 737 aa15.69■□□□□ 0.1
FOXN3-219ENST00000615335 CBX1P83916 185 aa15.69■□□□□ 0.1
FOXN3-219ENST00000615335 EPHA10Q5JZY3 1008 aa15.69■□□□□ 0.1
FOXN3-219ENST00000615335 TEX2Q8IWB9 1127 aa15.69■□□□□ 0.1
FOXN3-219ENST00000615335 FOXD4L1Q9NU39 408 aa15.69■□□□□ 0.1
FOXN3-219ENST00000615335 TUBGCP6Q96RT7 1819 aa15.69■□□□□ 0.1
FOXN3-219ENST00000615335 GTF2F1P35269 517 aaKnown RBP eCLIP15.69■□□□□ 0.11e-6■■■■□ 25.9
FOXN3-219ENST00000615335 PNPLA7Q6ZV29 1317 aa15.68■□□□□ 0.1
FOXN3-219ENST00000615335 ZNF445P59923 1031 aa15.68■□□□□ 0.1
FOXN3-219ENST00000615335 SH3TC1Q8TE82 1336 aa15.68■□□□□ 0.1
FOXN3-219ENST00000615335 VGLL3A8MV65 326 aa15.68■□□□□ 0.1
FOXN3-219ENST00000615335 IRS4O14654 1257 aaPredicted RBP15.68■□□□□ 0.1
FOXN3-219ENST00000615335 KLHL40Q2TBA0 621 aa15.68■□□□□ 0.1
FOXN3-219ENST00000615335 C16orf71Q8IYS4 520 aaPredicted RBP15.68■□□□□ 0.1
FOXN3-219ENST00000615335 UPF1Q92900 1129 aaKnown RBP eCLIP15.68■□□□□ 0.1
FOXN3-219ENST00000615335 MTX1Q13505 466 aa15.67■□□□□ 0.1
FOXN3-219ENST00000615335 NUTM1Q86Y26 1132 aa15.67■□□□□ 0.1
FOXN3-219ENST00000615335 CHMP3Q9Y3E7 222 aa15.67■□□□□ 0.1
FOXN3-219ENST00000615335 CDHR2Q9BYE9 1310 aa15.67■□□□□ 0.1
FOXN3-219ENST00000615335 NTSR2O95665 410 aa15.67■□□□□ 0.1
FOXN3-219ENST00000615335 FOXO4P98177 505 aa15.67■□□□□ 0.1
FOXN3-219ENST00000615335 LMBR1LQ6UX01 489 aa15.67■□□□□ 0.1
FOXN3-219ENST00000615335 SSH3Q8TE77 659 aa15.67■□□□□ 0.1
FOXN3-219ENST00000615335 NPHP1O15259 732 aa15.66■□□□□ 0.1
FOXN3-219ENST00000615335 NFIXQ14938 502 aa15.66■□□□□ 0.1
FOXN3-219ENST00000615335 RABEP1Q15276 862 aa15.66■□□□□ 0.1
FOXN3-219ENST00000615335 NBPF5PQ86XG9 351 aaPredicted RBP15.66■□□□□ 0.1
FOXN3-219ENST00000615335 RABL6Q3YEC7 729 aaPredicted RBP15.66■□□□□ 0.1
FOXN3-219ENST00000615335 PLCD3Q8N3E9 789 aa15.66■□□□□ 0.1
FOXN3-219ENST00000615335 DNAJC2Q99543 621 aaKnown RBP15.66■□□□□ 0.1
FOXN3-219ENST00000615335 POLA2Q14181 598 aa15.65■□□□□ 0.1
FOXN3-219ENST00000615335 TPTE2Q6XPS3 522 aa15.65■□□□□ 0.1
FOXN3-219ENST00000615335 NYXQ9GZU5 481 aa15.65■□□□□ 0.1
FOXN3-219ENST00000615335 APBB1O00213 710 aa15.65■□□□□ 0.1
FOXN3-219ENST00000615335 CHRM1P11229 460 aaPredicted RBP15.65■□□□□ 0.1
FOXN3-219ENST00000615335 HCLS1P14317 486 aaPredicted RBP15.65■□□□□ 0.1
FOXN3-219ENST00000615335 PLA2G12BQ9BX93 195 aa15.65■□□□□ 0.1
FOXN3-219ENST00000615335 CARMIL3Q8ND23 1372 aa15.65■□□□□ 0.1
FOXN3-219ENST00000615335 ERFEQ4G0M1 354 aa15.64■□□□□ 0.09
FOXN3-219ENST00000615335 CASC1Q6TDU7 716 aa15.64■□□□□ 0.09
FOXN3-219ENST00000615335 NLGN1Q8N2Q7 840 aa15.64■□□□□ 0.09
FOXN3-219ENST00000615335 OTUD7AQ8TE49 926 aaPredicted RBP15.64■□□□□ 0.09
FOXN3-219ENST00000615335 CCDC85AQ96PX6 553 aaPredicted RBP15.64■□□□□ 0.09
FOXN3-219ENST00000615335 USP26Q9BXU7 913 aa15.64■□□□□ 0.09
FOXN3-219ENST00000615335 CGNQ9P2M7 1197 aaKnown RBP15.64■□□□□ 0.09
FOXN3-219ENST00000615335 EXOC6BQ9Y2D4 811 aa15.64■□□□□ 0.09
FOXN3-219ENST00000615335 PDE8AO60658 829 aa15.64■□□□□ 0.09
FOXN3-219ENST00000615335 SURF6O75683 361 aaKnown RBP15.64■□□□□ 0.09
FOXN3-219ENST00000615335 CLEC17AQ6ZS10 378 aa15.64■□□□□ 0.09
FOXN3-219ENST00000615335 SMARCA5O60264 1052 aaPredicted RBP15.63■□□□□ 0.09
FOXN3-219ENST00000615335 HSP90B1P14625 803 aaKnown RBP15.63■□□□□ 0.09
FOXN3-219ENST00000615335 SDSP20132 328 aa15.63■□□□□ 0.09
FOXN3-219ENST00000615335 TM4SF1P30408 202 aa15.63■□□□□ 0.09
FOXN3-219ENST00000615335 CTSWP56202 376 aa15.63■□□□□ 0.09
FOXN3-219ENST00000615335 MYH3P11055 1940 aa15.63■□□□□ 0.09
FOXN3-219ENST00000615335 KIAA2012Q0VF49 1180 aa15.62■□□□□ 0.09
FOXN3-219ENST00000615335 ZNF710Q8N1W2 664 aa15.62■□□□□ 0.09
FOXN3-219ENST00000615335 CCDC24Q8N4L8 307 aa15.62■□□□□ 0.09
FOXN3-219ENST00000615335 KLHDC4Q8TBB5 520 aa15.62■□□□□ 0.09
FOXN3-219ENST00000615335 PA2G4Q9UQ80 394 aaKnown RBP15.62■□□□□ 0.09
FOXN3-219ENST00000615335 COL24A1Q17RW2 1714 aa15.62■□□□□ 0.09
FOXN3-219ENST00000615335 IRX3P78415 501 aaPredicted RBP15.62■□□□□ 0.09
FOXN3-219ENST00000615335 ATP2B3Q16720 1220 aa15.62■□□□□ 0.09
FOXN3-219ENST00000615335 MSL1Q68DK7 614 aa15.62■□□□□ 0.09
FOXN3-219ENST00000615335 TTLL11Q8NHH1 800 aa15.62■□□□□ 0.09
FOXN3-219ENST00000615335 SERPINB2P05120 415 aa15.61■□□□□ 0.09
FOXN3-219ENST00000615335 CSF1RP07333 972 aa15.61■□□□□ 0.09
FOXN3-219ENST00000615335 OS9Q13438 667 aaPredicted RBP15.61■□□□□ 0.09
FOXN3-219ENST00000615335 CCDC57Q2TAC2 916 aa15.61■□□□□ 0.09
FOXN3-219ENST00000615335 KLHL34Q8N239 644 aa15.61■□□□□ 0.09
FOXN3-219ENST00000615335 CNBD1Q8NA66 436 aa15.61■□□□□ 0.09
FOXN3-219ENST00000615335 SIL1Q9H173 461 aa15.61■□□□□ 0.09
FOXN3-219ENST00000615335 DDX49Q9Y6V7 483 aaKnown RBP15.61■□□□□ 0.09
FOXN3-219ENST00000615335 ZFP91Q96JP5 570 aaPredicted RBP15.6■□□□□ 0.09
FOXN3-219ENST00000615335 QSER1Q2KHR3 1735 aa15.6■□□□□ 0.09
FOXN3-219ENST00000615335 CCDC66A2RUB6 948 aa15.6■□□□□ 0.09
FOXN3-219ENST00000615335 ILDR2Q71H61 639 aa15.6■□□□□ 0.09
FOXN3-219ENST00000615335 ZNF771Q7L3S4 317 aaPredicted RBP15.6■□□□□ 0.09
FOXN3-219ENST00000615335 FEZ1Q99689 392 aa15.6■□□□□ 0.09
FOXN3-219ENST00000615335 PDGFDQ9GZP0 370 aaPredicted RBP15.6■□□□□ 0.09
FOXN3-219ENST00000615335 GREM2Q9H772 168 aa15.6■□□□□ 0.09
FOXN3-219ENST00000615335 DDX60Q8IY21 1712 aaKnown RBP15.6■□□□□ 0.09
FOXN3-219ENST00000615335 POLRMTO00411 1230 aaKnown RBP15.59■□□□□ 0.09
FOXN3-219ENST00000615335 RFX5P48382 616 aaPredicted RBP15.59■□□□□ 0.09
FOXN3-219ENST00000615335 GABPB1Q06547 395 aaPredicted RBP15.59■□□□□ 0.09
FOXN3-219ENST00000615335 DDR1Q08345 913 aa15.59■□□□□ 0.09
FOXN3-219ENST00000615335 IFIT5Q13325 482 aaKnown RBP15.59■□□□□ 0.09
FOXN3-219ENST00000615335 ABCC12Q96J65 1359 aa15.59■□□□□ 0.09
FOXN3-219ENST00000615335 REC8O95072 547 aa15.59■□□□□ 0.09
FOXN3-219ENST00000615335 BRD2P25440 801 aaKnown RBP15.59■□□□□ 0.09
FOXN3-219ENST00000615335 PTPN12Q05209 780 aaKnown RBP15.59■□□□□ 0.09
FOXN3-219ENST00000615335 G3BP1Q13283 466 aaKnown RBP eCLIP15.59■□□□□ 0.09
FOXN3-219ENST00000615335 HSP90AB4PQ58FF6 505 aa15.59■□□□□ 0.09
FOXN3-219ENST00000615335 SLC10A5Q5PT55 438 aa15.59■□□□□ 0.09
FOXN3-219ENST00000615335 PRR5LQ6MZQ0 368 aa15.59■□□□□ 0.09
FOXN3-219ENST00000615335 BAG4O95429 457 aaKnown RBP15.58■□□□□ 0.09
FOXN3-219ENST00000615335 MMP10P09238 476 aa15.58■□□□□ 0.09
FOXN3-219ENST00000615335 ITGA6P23229 1130 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms