RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 RBM6P78332 1123 aaKnown RBP11.97□□□□□ -0.49
GGA3-221ENST00000614198 TPRNQ4KMQ1 711 aa11.97□□□□□ -0.49
GGA3-221ENST00000614198 PI16Q6UXB8 463 aa11.97□□□□□ -0.49
GGA3-221ENST00000614198 RBM25P49756 843 aaKnown RBP11.97□□□□□ -0.49
GGA3-221ENST00000614198 TNNI3KQ59H18 835 aa11.97□□□□□ -0.49
GGA3-221ENST00000614198 CCDC94Q9BW85 323 aaPredicted RBP11.97□□□□□ -0.49
GGA3-221ENST00000614198 OSBPL3Q9H4L5 887 aa11.97□□□□□ -0.49
GGA3-221ENST00000614198 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.97□□□□□ -0.49
GGA3-221ENST00000614198 FPGT-TNNI3KV9GXZ4 949 aa11.97□□□□□ -0.49
GGA3-221ENST00000614198 CD2BP2O95400 341 aaKnown RBP11.96□□□□□ -0.49
GGA3-221ENST00000614198 RXRBP28702 533 aa11.96□□□□□ -0.49
GGA3-221ENST00000614198 CTSWP56202 376 aa11.96□□□□□ -0.49
GGA3-221ENST00000614198 TRIM28Q13263 835 aaKnown RBP11.96□□□□□ -0.49
GGA3-221ENST00000614198 SNRKQ9NRH2 765 aa11.96□□□□□ -0.49
GGA3-221ENST00000614198 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.96□□□□□ -0.49
GGA3-221ENST00000614198 ERVV-1B6SEH8 477 aa11.96□□□□□ -0.49
GGA3-221ENST00000614198 APBA3O96018 575 aa11.96□□□□□ -0.49
GGA3-221ENST00000614198 MCM5P33992 734 aa11.96□□□□□ -0.49
GGA3-221ENST00000614198 KLHL40Q2TBA0 621 aa11.96□□□□□ -0.49
GGA3-221ENST00000614198 TAF7LQ5H9L4 462 aa11.96□□□□□ -0.49
GGA3-221ENST00000614198 CWC27Q6UX04 472 aaKnown RBP11.96□□□□□ -0.49
GGA3-221ENST00000614198 CLEC17AQ6ZS10 378 aa11.96□□□□□ -0.49
GGA3-221ENST00000614198 PDLIM2Q96JY6 352 aa11.96□□□□□ -0.49
GGA3-221ENST00000614198 DNAJC2Q99543 621 aaKnown RBP11.96□□□□□ -0.49
GGA3-221ENST00000614198 STAP2Q9UGK3 403 aa11.96□□□□□ -0.49
GGA3-221ENST00000614198 RTCBQ9Y3I0 505 aaKnown RBP11.96□□□□□ -0.49
GGA3-221ENST00000614198 NTSR2O95665 410 aa11.96□□□□□ -0.5
GGA3-221ENST00000614198 ZSCAN20P17040 1043 aaPredicted RBP11.96□□□□□ -0.5
GGA3-221ENST00000614198 DNTTIP2Q5QJE6 756 aaKnown RBP11.96□□□□□ -0.5
GGA3-221ENST00000614198 ZNF445P59923 1031 aa11.95□□□□□ -0.5
GGA3-221ENST00000614198 IFIT5Q13325 482 aaKnown RBP11.95□□□□□ -0.5
GGA3-221ENST00000614198 SASS6Q6UVJ0 657 aa11.95□□□□□ -0.5
GGA3-221ENST00000614198 UTP14AQ9BVJ6 771 aaKnown RBP11.95□□□□□ -0.5
GGA3-221ENST00000614198 DTNBO60941 627 aa11.95□□□□□ -0.5
GGA3-221ENST00000614198 LDHAL6AQ6ZMR3 332 aa11.95□□□□□ -0.5
GGA3-221ENST00000614198 AK7Q96M32 723 aa11.95□□□□□ -0.5
GGA3-221ENST00000614198 KIF2CQ99661 725 aa11.95□□□□□ -0.5
GGA3-221ENST00000614198 RPS6KA4O75676 772 aa11.95□□□□□ -0.5
GGA3-221ENST00000614198 CSF1RP07333 972 aa11.95□□□□□ -0.5
GGA3-221ENST00000614198 CHMLP26374 656 aa11.95□□□□□ -0.5
GGA3-221ENST00000614198 ZNF827Q17R98 1081 aa11.95□□□□□ -0.5
GGA3-221ENST00000614198 FAM227BQ96M60 508 aa11.95□□□□□ -0.5
GGA3-221ENST00000614198 ECHDC1Q9NTX5 307 aa11.95□□□□□ -0.5
GGA3-221ENST00000614198 TUBGCP6Q96RT7 1819 aa11.95□□□□□ -0.5
GGA3-221ENST00000614198 ANKRD36CQ5JPF3 1778 aa11.94□□□□□ -0.5
GGA3-221ENST00000614198 TAF1LQ8IZX4 1826 aa11.94□□□□□ -0.5
GGA3-221ENST00000614198 EYA2O00167 538 aa11.94□□□□□ -0.5
GGA3-221ENST00000614198 ZPR1O75312 459 aa11.94□□□□□ -0.5
GGA3-221ENST00000614198 GTF2E1P29083 439 aaPredicted RBP11.94□□□□□ -0.5
GGA3-221ENST00000614198 TXNRD1Q16881 649 aa11.94□□□□□ -0.5
GGA3-221ENST00000614198 ZNF772Q68DY9 489 aaPredicted RBP11.94□□□□□ -0.5
GGA3-221ENST00000614198 DDX46Q7L014 1031 aaKnown RBP11.94□□□□□ -0.5
GGA3-221ENST00000614198 ABCC12Q96J65 1359 aa11.94□□□□□ -0.5
GGA3-221ENST00000614198 SH3TC1Q8TE82 1336 aa11.94□□□□□ -0.5
GGA3-221ENST00000614198 PTMAP06454 111 aaKnown RBP11.94□□□□□ -0.5
GGA3-221ENST00000614198 RFC4P35249 363 aa11.94□□□□□ -0.5
GGA3-221ENST00000614198 SCARF1Q14162 830 aa11.94□□□□□ -0.5
GGA3-221ENST00000614198 HSP90AB4PQ58FF6 505 aa11.94□□□□□ -0.5
GGA3-221ENST00000614198 ZKSCAN5Q9Y2L8 839 aa11.94□□□□□ -0.5
GGA3-221ENST00000614198 A0A1B0GUL7 405 aa11.93□□□□□ -0.5
GGA3-221ENST00000614198 COL9A3Q14050 684 aaPredicted RBP11.93□□□□□ -0.5
GGA3-221ENST00000614198 PDGFDQ9GZP0 370 aaPredicted RBP11.93□□□□□ -0.5
GGA3-221ENST00000614198 HSP90AB3PQ58FF7 597 aa11.93□□□□□ -0.5
GGA3-221ENST00000614198 FOXD4L5Q5VV16 416 aaPredicted RBP11.93□□□□□ -0.5
GGA3-221ENST00000614198 FOXD4L4Q8WXT5 416 aaPredicted RBP11.93□□□□□ -0.5
GGA3-221ENST00000614198 SEC62Q99442 399 aaKnown RBP11.93□□□□□ -0.5
GGA3-221ENST00000614198 CNNM1Q9NRU3 951 aa11.93□□□□□ -0.5
GGA3-221ENST00000614198 PALD1Q9ULE6 856 aa11.93□□□□□ -0.5
GGA3-221ENST00000614198 CNTNAP4Q9C0A0 1308 aa11.93□□□□□ -0.5
GGA3-221ENST00000614198 PDE8AO60658 829 aa11.93□□□□□ -0.5
GGA3-221ENST00000614198 TRAPPC3LQ5T215 181 aa11.93□□□□□ -0.5
GGA3-221ENST00000614198 MSL1Q68DK7 614 aa11.93□□□□□ -0.5
GGA3-221ENST00000614198 ANO2Q9NQ90 1003 aa11.92□□□□□ -0.5
GGA3-221ENST00000614198 IQSEC3Q9UPP2 1182 aaPredicted RBP11.92□□□□□ -0.5
GGA3-221ENST00000614198 LY75O60449 1722 aa11.92□□□□□ -0.5
GGA3-221ENST00000614198 C4BP0C0L5 1744 aa11.92□□□□□ -0.5
GGA3-221ENST00000614198 SPEF2Q9C093 1822 aa11.92□□□□□ -0.5
GGA3-221ENST00000614198 ERC1Q8IUD2 1116 aa11.92□□□□□ -0.5
GGA3-221ENST00000614198 USP26Q9BXU7 913 aa11.92□□□□□ -0.5
GGA3-221ENST00000614198 GTPBP4Q9BZE4 634 aaKnown RBP11.92□□□□□ -0.5
GGA3-221ENST00000614198 NARFQ9UHQ1 456 aa11.92□□□□□ -0.5
GGA3-221ENST00000614198 HDAC5Q9UQL6 1122 aa11.92□□□□□ -0.5
GGA3-221ENST00000614198 METTL24Q5JXM2 366 aa11.92□□□□□ -0.5
GGA3-221ENST00000614198 CAVIN1Q6NZI2 390 aaKnown RBP11.92□□□□□ -0.5
GGA3-221ENST00000614198 MPNDQ8N594 471 aa11.92□□□□□ -0.5
GGA3-221ENST00000614198 RREB1Q92766 1687 aa11.91□□□□□ -0.5
GGA3-221ENST00000614198 NPHP1O15259 732 aa11.91□□□□□ -0.5
GGA3-221ENST00000614198 EN1Q05925 392 aaPredicted RBP11.91□□□□□ -0.5
GGA3-221ENST00000614198 NFIXQ14938 502 aa11.91□□□□□ -0.5
GGA3-221ENST00000614198 CCDC129Q6ZRS4 1044 aa11.91□□□□□ -0.5
GGA3-221ENST00000614198 NBPF5PQ86XG9 351 aaPredicted RBP11.91□□□□□ -0.5
GGA3-221ENST00000614198 SETDB2Q96T68 719 aa11.91□□□□□ -0.5
GGA3-221ENST00000614198 ESYT1Q9BSJ8 1104 aa11.91□□□□□ -0.5
GGA3-221ENST00000614198 RIPOR2Q9Y4F9 1068 aa11.91□□□□□ -0.5
GGA3-221ENST00000614198 AK9Q5TCS8 1911 aa11.91□□□□□ -0.5
GGA3-221ENST00000614198 ANKRD18BA2A2Z9 1011 aa11.91□□□□□ -0.5
GGA3-221ENST00000614198 KIF20AO95235 890 aa11.91□□□□□ -0.5
GGA3-221ENST00000614198 SSFA2P28290 1259 aa11.91□□□□□ -0.5
GGA3-221ENST00000614198 MCTP1Q6DN14 999 aa11.91□□□□□ -0.5
GGA3-221ENST00000614198 CELF1Q92879 486 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms