RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 NSUN5Q96P11 429 aaKnown RBP6.47□□□□□ -1.37
CKS1BP3-201ENST00000600888 RRAGCQ9HB90 399 aa6.47□□□□□ -1.37
CKS1BP3-201ENST00000600888 PHF20L1A8MW92 1017 aa6.46□□□□□ -1.38
CKS1BP3-201ENST00000600888 J3QW42 95 aa6.46□□□□□ -1.38
CKS1BP3-201ENST00000600888 CES1P23141 567 aa6.46□□□□□ -1.38
CKS1BP3-201ENST00000600888 MAPK1P28482 360 aa6.46□□□□□ -1.38
CKS1BP3-201ENST00000600888 PERM1Q5SV97 790 aa6.46□□□□□ -1.38
CKS1BP3-201ENST00000600888 COL13A1Q5TAT6 717 aaPredicted RBP6.46□□□□□ -1.38
CKS1BP3-201ENST00000600888 C20orf204Q6ZNR8 217 aa6.46□□□□□ -1.38
CKS1BP3-201ENST00000600888 SND1Q7KZF4 910 aaKnown RBP eCLIP6.46□□□□□ -1.38
CKS1BP3-201ENST00000600888 MICALL1Q8N3F8 863 aa6.46□□□□□ -1.38
CKS1BP3-201ENST00000600888 PMEPA1Q969W9 287 aa6.46□□□□□ -1.38
CKS1BP3-201ENST00000600888 GZF1Q9H116 711 aaPredicted RBP6.46□□□□□ -1.38
CKS1BP3-201ENST00000600888 CHRDQ9H2X0 955 aa6.46□□□□□ -1.38
CKS1BP3-201ENST00000600888 FOXD3Q9UJU5 478 aaPredicted RBP6.46□□□□□ -1.38
CKS1BP3-201ENST00000600888 NAGPAQ9UK23 515 aa6.46□□□□□ -1.38
CKS1BP3-201ENST00000600888 M0R082 166 aa6.45□□□□□ -1.38
CKS1BP3-201ENST00000600888 IGHA2P01877 340 aa6.45□□□□□ -1.38
CKS1BP3-201ENST00000600888 ALBP02768 609 aa6.45□□□□□ -1.38
CKS1BP3-201ENST00000600888 DGKGP49619 791 aa6.45□□□□□ -1.38
CKS1BP3-201ENST00000600888 HYAL2Q12891 473 aa6.45□□□□□ -1.38
CKS1BP3-201ENST00000600888 PSAPL1Q6NUJ1 521 aa6.45□□□□□ -1.38
CKS1BP3-201ENST00000600888 ELMSAN1Q6PJG2 1045 aa6.45□□□□□ -1.38
CKS1BP3-201ENST00000600888 LINC00114Q6XXX2 140 aa6.45□□□□□ -1.38
CKS1BP3-201ENST00000600888 TMC7Q7Z402 723 aa6.45□□□□□ -1.38
CKS1BP3-201ENST00000600888 BEND7Q8N7W2 519 aaPredicted RBP6.45□□□□□ -1.38
CKS1BP3-201ENST00000600888 ZNF417Q8TAU3 575 aa6.45□□□□□ -1.38
CKS1BP3-201ENST00000600888 SNX29Q8TEQ0 813 aa6.45□□□□□ -1.38
CKS1BP3-201ENST00000600888 ZNF587Q96SQ5 575 aaPredicted RBP6.45□□□□□ -1.38
CKS1BP3-201ENST00000600888 ZFYVE28Q9HCC9 887 aa6.45□□□□□ -1.38
CKS1BP3-201ENST00000600888 CNTNAP5Q8WYK1 1306 aa6.45□□□□□ -1.38
CKS1BP3-201ENST00000600888 PHACTR2O75167 634 aa6.44□□□□□ -1.38
CKS1BP3-201ENST00000600888 RGS9O75916 674 aaPredicted RBP6.44□□□□□ -1.38
CKS1BP3-201ENST00000600888 KIF4AO95239 1232 aa6.44□□□□□ -1.38
CKS1BP3-201ENST00000600888 C8orf86Q6ZUL3 223 aa6.44□□□□□ -1.38
CKS1BP3-201ENST00000600888 NUDT8Q8WV74 236 aa6.44□□□□□ -1.38
CKS1BP3-201ENST00000600888 SCARF2Q96GP6 870 aaPredicted RBP6.44□□□□□ -1.38
CKS1BP3-201ENST00000600888 DMRTB1Q96MA1 342 aa6.44□□□□□ -1.38
CKS1BP3-201ENST00000600888 LPIN3Q9BQK8 851 aa6.44□□□□□ -1.38
CKS1BP3-201ENST00000600888 NIF3L1Q9GZT8 377 aa6.44□□□□□ -1.38
CKS1BP3-201ENST00000600888 PRDM6Q9NQX0 595 aa6.44□□□□□ -1.38
CKS1BP3-201ENST00000600888 FRRS1LQ9P0K9 344 aa6.44□□□□□ -1.38
CKS1BP3-201ENST00000600888 SALL4Q9UJQ4 1053 aa6.44□□□□□ -1.38
CKS1BP3-201ENST00000600888 MKL2Q9ULH7 1088 aa6.44□□□□□ -1.38
CKS1BP3-201ENST00000600888 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.44□□□□□ -1.38
CKS1BP3-201ENST00000600888 ZBTB7CA1YPR0 619 aa6.43□□□□□ -1.38
CKS1BP3-201ENST00000600888 EREGO14944 169 aa6.43□□□□□ -1.38
CKS1BP3-201ENST00000600888 GPR182O15218 404 aa6.43□□□□□ -1.38
CKS1BP3-201ENST00000600888 LILRB5O75023 590 aa6.43□□□□□ -1.38
CKS1BP3-201ENST00000600888 GHRHP01286 108 aa6.43□□□□□ -1.38
CKS1BP3-201ENST00000600888 NEFLP07196 543 aa6.43□□□□□ -1.38
CKS1BP3-201ENST00000600888 EIF2AK2P19525 551 aaKnown RBP6.43□□□□□ -1.38
CKS1BP3-201ENST00000600888 PODNQ7Z5L7 613 aa6.43□□□□□ -1.38
CKS1BP3-201ENST00000600888 NCAPG2Q86XI2 1143 aa6.43□□□□□ -1.38
CKS1BP3-201ENST00000600888 CEP120Q8N960 986 aa6.43□□□□□ -1.38
CKS1BP3-201ENST00000600888 TTC9Q92623 222 aa6.43□□□□□ -1.38
CKS1BP3-201ENST00000600888 PLD4Q96BZ4 506 aa6.43□□□□□ -1.38
CKS1BP3-201ENST00000600888 SPACA7Q96KW9 195 aa6.43□□□□□ -1.38
CKS1BP3-201ENST00000600888 SMG9Q9H0W8 520 aaKnown RBP6.43□□□□□ -1.38
CKS1BP3-201ENST00000600888 RBSNQ9H1K0 784 aa6.43□□□□□ -1.38
CKS1BP3-201ENST00000600888 JPH1Q9HDC5 661 aaPredicted RBP6.43□□□□□ -1.38
CKS1BP3-201ENST00000600888 KANSL3Q9P2N6 904 aa6.43□□□□□ -1.38
CKS1BP3-201ENST00000600888 ORC1Q13415 861 aa6.42□□□□□ -1.38
CKS1BP3-201ENST00000600888 COL9A3Q14050 684 aaPredicted RBP6.42□□□□□ -1.38
CKS1BP3-201ENST00000600888 ZSCAN29Q8IWY8 852 aaPredicted RBP6.42□□□□□ -1.38
CKS1BP3-201ENST00000600888 ALKBH8Q96BT7 664 aaKnown RBP6.42□□□□□ -1.38
CKS1BP3-201ENST00000600888 ASB16Q96NS5 453 aa6.42□□□□□ -1.38
CKS1BP3-201ENST00000600888 SMARCA4P51532 1647 aa6.42□□□□□ -1.38
CKS1BP3-201ENST00000600888 AFF1P51825 1210 aaKnown RBP6.41□□□□□ -1.38
CKS1BP3-201ENST00000600888 PLCB3Q01970 1234 aa6.41□□□□□ -1.38
CKS1BP3-201ENST00000600888 DSC3Q14574 896 aa6.41□□□□□ -1.38
CKS1BP3-201ENST00000600888 AMOTL2Q9Y2J4 779 aa6.41□□□□□ -1.38
CKS1BP3-201ENST00000600888 NCAPD3P42695 1498 aa6.41□□□□□ -1.38
CKS1BP3-201ENST00000600888 PIK3R2O00459 728 aa6.4□□□□□ -1.38
CKS1BP3-201ENST00000600888 GNB5O14775 395 aa6.4□□□□□ -1.38
CKS1BP3-201ENST00000600888 TREHO43280 583 aa6.4□□□□□ -1.38
CKS1BP3-201ENST00000600888 NID1P14543 1247 aa6.4□□□□□ -1.38
CKS1BP3-201ENST00000600888 GRIK5Q16478 980 aa6.4□□□□□ -1.38
CKS1BP3-201ENST00000600888 USPL1Q5W0Q7 1092 aa6.4□□□□□ -1.38
CKS1BP3-201ENST00000600888 DNAJC25Q9H1X3 360 aa6.4□□□□□ -1.38
CKS1BP3-201ENST00000600888 RASSF4Q9H2L5 321 aa6.4□□□□□ -1.38
CKS1BP3-201ENST00000600888 SMARCA2P51531 1590 aa6.4□□□□□ -1.39
CKS1BP3-201ENST00000600888 PEG3Q9GZU2 1588 aa6.4□□□□□ -1.39
CKS1BP3-201ENST00000600888 BAZ1AQ9NRL2 1556 aaPredicted RBP6.4□□□□□ -1.39
CKS1BP3-201ENST00000600888 EIF1AYO14602 144 aaKnown RBP6.39□□□□□ -1.39
CKS1BP3-201ENST00000600888 CPNE3O75131 537 aaKnown RBP6.39□□□□□ -1.39
CKS1BP3-201ENST00000600888 POLR3DP05423 398 aaPredicted RBP6.39□□□□□ -1.39
CKS1BP3-201ENST00000600888 EDN3P14138 238 aa6.39□□□□□ -1.39
CKS1BP3-201ENST00000600888 ATP11AP98196 1134 aa6.39□□□□□ -1.39
CKS1BP3-201ENST00000600888 TRIM11Q96F44 468 aa6.39□□□□□ -1.39
CKS1BP3-201ENST00000600888 CSRNP1Q96S65 589 aa6.39□□□□□ -1.39
CKS1BP3-201ENST00000600888 PLVAPQ9BX97 442 aa6.39□□□□□ -1.39
CKS1BP3-201ENST00000600888 PBX4Q9BYU1 374 aa6.39□□□□□ -1.39
CKS1BP3-201ENST00000600888 SUV39H2Q9H5I1 410 aa6.39□□□□□ -1.39
CKS1BP3-201ENST00000600888 DZANK1Q9NVP4 752 aa6.39□□□□□ -1.39
CKS1BP3-201ENST00000600888 HMGXB3Q12766 1538 aa6.39□□□□□ -1.39
CKS1BP3-201ENST00000600888 NFKBIEO00221 500 aa6.38□□□□□ -1.39
CKS1BP3-201ENST00000600888 ACPPP15309 386 aa6.38□□□□□ -1.39
CKS1BP3-201ENST00000600888 IRS1P35568 1242 aa6.38□□□□□ -1.39
CKS1BP3-201ENST00000600888 TRIM26Q12899 539 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms