RNA–Protein interactions for RNA: ENST00000594107.1

XRCC1-203, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-203ENST00000594107 RTL9Q8NET4 1388 aa11.18□□□□□ -0.62
XRCC1-203ENST00000594107 VIL1P09327 827 aaKnown RBP11.18□□□□□ -0.62
XRCC1-203ENST00000594107 FKBP1BP68106 108 aa11.18□□□□□ -0.62
XRCC1-203ENST00000594107 ANGEL2Q5VTE6 544 aaKnown RBP11.18□□□□□ -0.62
XRCC1-203ENST00000594107 CCER1Q8TC90 406 aaPredicted RBP11.18□□□□□ -0.62
XRCC1-203ENST00000594107 XAGE3Q8WTP9 111 aa11.18□□□□□ -0.62
XRCC1-203ENST00000594107 NECTIN2Q92692 538 aa11.18□□□□□ -0.62
XRCC1-203ENST00000594107 ZC3H12CQ9C0D7 883 aaKnown RBP11.18□□□□□ -0.62
XRCC1-203ENST00000594107 TSPYL4Q9UJ04 414 aa11.18□□□□□ -0.62
XRCC1-203ENST00000594107 UBE2Q2LH0YL09 131 aa11.17□□□□□ -0.62
XRCC1-203ENST00000594107 NFE2L2Q16236 605 aa11.17□□□□□ -0.62
XRCC1-203ENST00000594107 HABP4Q5JVS0 413 aaKnown RBP11.17□□□□□ -0.62
XRCC1-203ENST00000594107 MOB2Q70IA6 237 aa11.17□□□□□ -0.62
XRCC1-203ENST00000594107 PLEKHF1Q96S99 279 aa11.17□□□□□ -0.62
XRCC1-203ENST00000594107 LRRC37AA6NMS7 1700 aa11.17□□□□□ -0.62
XRCC1-203ENST00000594107 GPR25O00155 361 aa11.16□□□□□ -0.62
XRCC1-203ENST00000594107 TM4SF4P48230 202 aa11.16□□□□□ -0.62
XRCC1-203ENST00000594107 SF3B3Q15393 1217 aaKnown RBP11.16□□□□□ -0.62
XRCC1-203ENST00000594107 FBXO46Q6PJ61 603 aaPredicted RBP11.16□□□□□ -0.62
XRCC1-203ENST00000594107 TBC1D16Q8TBP0 767 aa11.16□□□□□ -0.62
XRCC1-203ENST00000594107 FAM89AQ96GI7 184 aa11.16□□□□□ -0.62
XRCC1-203ENST00000594107 DDX60Q8IY21 1712 aaKnown RBP11.15□□□□□ -0.62
XRCC1-203ENST00000594107 RPS8P62241 208 aaKnown RBP11.15□□□□□ -0.62
XRCC1-203ENST00000594107 TTLL12Q14166 644 aaPredicted RBP11.15□□□□□ -0.62
XRCC1-203ENST00000594107 RTL5Q5HYW3 569 aaPredicted RBP11.15□□□□□ -0.62
XRCC1-203ENST00000594107 AGBL3Q8NEM8 1001 aa11.15□□□□□ -0.62
XRCC1-203ENST00000594107 PNNQ9H307 717 aaKnown RBP11.15□□□□□ -0.62
XRCC1-203ENST00000594107 SCAF8Q9UPN6 1271 aaKnown RBP11.15□□□□□ -0.62
XRCC1-203ENST00000594107 SCN9AQ15858 1988 aa11.14□□□□□ -0.63
XRCC1-203ENST00000594107 FKTNO75072 461 aa11.14□□□□□ -0.63
XRCC1-203ENST00000594107 ZNF280AP59817 542 aaPredicted RBP11.14□□□□□ -0.63
XRCC1-203ENST00000594107 MKRN3Q13064 507 aaKnown RBP11.14□□□□□ -0.63
XRCC1-203ENST00000594107 NOM1Q5C9Z4 860 aaKnown RBP11.14□□□□□ -0.63
XRCC1-203ENST00000594107 PRAMEF18Q5VWM3 479 aa11.14□□□□□ -0.63
XRCC1-203ENST00000594107 RSBN1LQ6PCB5 846 aaPredicted RBP11.14□□□□□ -0.63
XRCC1-203ENST00000594107 ANKIB1Q9P2G1 1089 aa11.14□□□□□ -0.63
XRCC1-203ENST00000594107 PAPPA2Q9BXP8 1791 aa11.13□□□□□ -0.63
XRCC1-203ENST00000594107 MAPK8IP3Q9UPT6 1336 aa11.13□□□□□ -0.63
XRCC1-203ENST00000594107 ATP5J2-PTCD1G3V325 749 aa11.13□□□□□ -0.63
XRCC1-203ENST00000594107 USP17L8P0C7I0 530 aa11.13□□□□□ -0.63
XRCC1-203ENST00000594107 ANKRD13DQ6ZTN6 518 aa11.13□□□□□ -0.63
XRCC1-203ENST00000594107 MYOZ2Q9NPC6 264 aa11.13□□□□□ -0.63
XRCC1-203ENST00000594107 PODXL2Q9NZ53 605 aa11.13□□□□□ -0.63
XRCC1-203ENST00000594107 PITPNM2Q9BZ72 1349 aa11.12□□□□□ -0.63
XRCC1-203ENST00000594107 UFL1O94874 794 aa11.12□□□□□ -0.63
XRCC1-203ENST00000594107 RIPK4P57078 832 aa11.12□□□□□ -0.63
XRCC1-203ENST00000594107 PLBD2Q8NHP8 589 aa11.12□□□□□ -0.63
XRCC1-203ENST00000594107 R3HDMLQ9H3Y0 253 aa11.12□□□□□ -0.63
XRCC1-203ENST00000594107 BABAM1Q9NWV8 329 aa11.12□□□□□ -0.63
XRCC1-203ENST00000594107 GGA1Q9UJY5 639 aa11.12□□□□□ -0.63
XRCC1-203ENST00000594107 COL4A1P02462 1669 aa11.11□□□□□ -0.63
XRCC1-203ENST00000594107 IRS4O14654 1257 aaPredicted RBP11.11□□□□□ -0.63
XRCC1-203ENST00000594107 NF2P35240 595 aa11.11□□□□□ -0.63
XRCC1-203ENST00000594107 SREBF2Q12772 1141 aa11.11□□□□□ -0.63
XRCC1-203ENST00000594107 NBPF9Q3BBW0 867 aa11.11□□□□□ -0.63
XRCC1-203ENST00000594107 INTS3Q68E01 1043 aaKnown RBP11.11□□□□□ -0.63
XRCC1-203ENST00000594107 GMLQ99445 158 aa11.11□□□□□ -0.63
XRCC1-203ENST00000594107 ISCA1Q9BUE6 129 aa11.11□□□□□ -0.63
XRCC1-203ENST00000594107 SEC31BQ9NQW1 1179 aa11.11□□□□□ -0.63
XRCC1-203ENST00000594107 POTEFA5A3E0 1075 aa11.1□□□□□ -0.63
XRCC1-203ENST00000594107 USP17L3A6NCW0 530 aa11.1□□□□□ -0.63
XRCC1-203ENST00000594107 USP17L4A6NCW7 530 aa11.1□□□□□ -0.63
XRCC1-203ENST00000594107 PTPN12Q05209 780 aaKnown RBP11.1□□□□□ -0.63
XRCC1-203ENST00000594107 PRKG1Q13976 671 aa11.1□□□□□ -0.63
XRCC1-203ENST00000594107 USP17L1Q7RTZ2 530 aa11.1□□□□□ -0.63
XRCC1-203ENST00000594107 CFHR5Q9BXR6 569 aa11.1□□□□□ -0.63
XRCC1-203ENST00000594107 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.1□□□□□ -0.63
XRCC1-203ENST00000594107 CHPF2Q9P2E5 772 aa11.1□□□□□ -0.63
XRCC1-203ENST00000594107 TRIM17Q9Y577 477 aa11.1□□□□□ -0.63
XRCC1-203ENST00000594107 PSME4Q14997 1843 aa11.09□□□□□ -0.63
XRCC1-203ENST00000594107 KRT24Q2M2I5 525 aa11.09□□□□□ -0.63
XRCC1-203ENST00000594107 ARMC9Q7Z3E5 817 aa11.09□□□□□ -0.63
XRCC1-203ENST00000594107 PODNQ7Z5L7 613 aa11.09□□□□□ -0.63
XRCC1-203ENST00000594107 ALDH1A1P00352 501 aa11.08□□□□□ -0.64
XRCC1-203ENST00000594107 INHBEP58166 350 aa11.08□□□□□ -0.64
XRCC1-203ENST00000594107 OGFOD1Q8N543 542 aa11.08□□□□□ -0.64
XRCC1-203ENST00000594107 LAS1LQ9Y4W2 734 aaKnown RBP11.08□□□□□ -0.64
XRCC1-203ENST00000594107 WNT10BO00744 389 aa11.07□□□□□ -0.64
XRCC1-203ENST00000594107 HSP90B1P14625 803 aaKnown RBP11.07□□□□□ -0.64
XRCC1-203ENST00000594107 ATP2B4P23634 1241 aa11.07□□□□□ -0.64
XRCC1-203ENST00000594107 FXR1P51114 621 aaKnown RBP eCLIP11.07□□□□□ -0.64
XRCC1-203ENST00000594107 TRIM28Q13263 835 aaKnown RBP11.07□□□□□ -0.64
XRCC1-203ENST00000594107 SPRYD7Q5W111 196 aa11.07□□□□□ -0.64
XRCC1-203ENST00000594107 OTOP1Q7RTM1 612 aa11.07□□□□□ -0.64
XRCC1-203ENST00000594107 FBXW7Q969H0 707 aa11.07□□□□□ -0.64
XRCC1-203ENST00000594107 SLC10A4Q96EP9 437 aa11.07□□□□□ -0.64
XRCC1-203ENST00000594107 MXD3Q9BW11 206 aa11.07□□□□□ -0.64
XRCC1-203ENST00000594107 DBF4Q9UBU7 674 aaPredicted RBP11.07□□□□□ -0.64
XRCC1-203ENST00000594107 ZNF609O15014 1411 aa11.07□□□□□ -0.64
XRCC1-203ENST00000594107 XDHP47989 1333 aa11.07□□□□□ -0.64
XRCC1-203ENST00000594107 WTIPA6NIX2 430 aaPredicted RBP11.06□□□□□ -0.64
XRCC1-203ENST00000594107 EN2P19622 333 aaPredicted RBP11.06□□□□□ -0.64
XRCC1-203ENST00000594107 NEUROD2Q15784 382 aa11.06□□□□□ -0.64
XRCC1-203ENST00000594107 CCDC152Q4G0S7 254 aa11.06□□□□□ -0.64
XRCC1-203ENST00000594107 LDLRAD1Q5T700 205 aa11.06□□□□□ -0.64
XRCC1-203ENST00000594107 HDGFL1Q5TGJ6 251 aa11.06□□□□□ -0.64
XRCC1-203ENST00000594107 RIC3Q7Z5B4 369 aa11.06□□□□□ -0.64
XRCC1-203ENST00000594107 IFNL1Q8IU54 200 aa11.06□□□□□ -0.64
XRCC1-203ENST00000594107 ZBTB38Q8NAP3 1195 aaPredicted RBP11.06□□□□□ -0.64
XRCC1-203ENST00000594107 CCDC85AQ96PX6 553 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms