RNA–Protein interactions for RNA: ENST00000593832.1

COLGALT1-202, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

TSL 2

Gene COLGALT1, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-202ENST00000593832 RNF20Q5VTR2 975 aa16.64■□□□□ 0.25
COLGALT1-202ENST00000593832 LMOD2Q6P5Q4 547 aa16.64■□□□□ 0.25
COLGALT1-202ENST00000593832 ERC1Q8IUD2 1116 aa16.64■□□□□ 0.25
COLGALT1-202ENST00000593832 DDX11Q96FC9 970 aa16.64■□□□□ 0.25
COLGALT1-202ENST00000593832 ERO1AQ96HE7 468 aa16.64■□□□□ 0.25
COLGALT1-202ENST00000593832 MED23Q9ULK4 1368 aa16.64■□□□□ 0.25
COLGALT1-202ENST00000593832 CCDC69A6NI79 296 aa16.64■□□□□ 0.25
COLGALT1-202ENST00000593832 ELF2Q15723 593 aa16.64■□□□□ 0.25
COLGALT1-202ENST00000593832 TSGA10IPQ3SY00 556 aa16.64■□□□□ 0.25
COLGALT1-202ENST00000593832 PROSER2Q86WR7 435 aaPredicted RBP16.64■□□□□ 0.25
COLGALT1-202ENST00000593832 EAF2Q96CJ1 260 aaPredicted RBP16.64■□□□□ 0.25
COLGALT1-202ENST00000593832 LTV1Q96GA3 475 aaPredicted RBP16.64■□□□□ 0.25
COLGALT1-202ENST00000593832 CALCOCO1Q9P1Z2 691 aa16.64■□□□□ 0.25
COLGALT1-202ENST00000593832 HOXC9P31274 260 aa16.63■□□□□ 0.25
COLGALT1-202ENST00000593832 CCAR2Q8N163 923 aaKnown RBP16.63■□□□□ 0.25
COLGALT1-202ENST00000593832 BRF1Q92994 677 aa16.63■□□□□ 0.25
COLGALT1-202ENST00000593832 CEMIPQ8WUJ3 1361 aa16.63■□□□□ 0.25
COLGALT1-202ENST00000593832 SASH1O94885 1247 aa16.63■□□□□ 0.25
COLGALT1-202ENST00000593832 GTF2A1P52655 376 aaPredicted RBP16.63■□□□□ 0.25
COLGALT1-202ENST00000593832 SLFNL1Q499Z3 407 aa16.63■□□□□ 0.25
COLGALT1-202ENST00000593832 ZNF589Q86UQ0 364 aaPredicted RBP16.63■□□□□ 0.25
COLGALT1-202ENST00000593832 DHX40Q8IX18 779 aaKnown RBP16.63■□□□□ 0.25
COLGALT1-202ENST00000593832 GTF3C6Q969F1 213 aa16.63■□□□□ 0.25
COLGALT1-202ENST00000593832 KCND1Q9NSA2 647 aa16.63■□□□□ 0.25
COLGALT1-202ENST00000593832 TRMT1Q9NXH9 659 aaKnown RBP16.63■□□□□ 0.25
COLGALT1-202ENST00000593832 JCADQ9P266 1359 aa16.63■□□□□ 0.25
COLGALT1-202ENST00000593832 CLGNO14967 610 aa16.63■□□□□ 0.25
COLGALT1-202ENST00000593832 ADD1P35611 737 aaKnown RBP16.63■□□□□ 0.25
COLGALT1-202ENST00000593832 FILIP1Q7Z7B0 1213 aa16.63■□□□□ 0.25
COLGALT1-202ENST00000593832 ORAI2Q96SN7 254 aa16.63■□□□□ 0.25
COLGALT1-202ENST00000593832 HOXB7P09629 217 aa16.62■□□□□ 0.25
COLGALT1-202ENST00000593832 STX1AQ16623 288 aa16.62■□□□□ 0.25
COLGALT1-202ENST00000593832 ZNF446Q9NWS9 450 aa16.62■□□□□ 0.25
COLGALT1-202ENST00000593832 HNRNPH2P55795 449 aaKnown RBP16.62■□□□□ 0.25
COLGALT1-202ENST00000593832 PSME1Q06323 249 aa16.62■□□□□ 0.25
COLGALT1-202ENST00000593832 A0A087WWV3 80 aa16.61■□□□□ 0.25
COLGALT1-202ENST00000593832 TULP2O00295 520 aa16.61■□□□□ 0.25
COLGALT1-202ENST00000593832 KCNQ3O43525 872 aa16.61■□□□□ 0.25
COLGALT1-202ENST00000593832 SNW1Q13573 536 aaKnown RBP16.61■□□□□ 0.25
COLGALT1-202ENST00000593832 CCDC8Q9H0W5 538 aaPredicted RBP16.61■□□□□ 0.25
COLGALT1-202ENST00000593832 TLR7Q9NYK1 1049 aaKnown RBP16.61■□□□□ 0.25
COLGALT1-202ENST00000593832 HMG20BQ9P0W2 317 aa16.61■□□□□ 0.25
COLGALT1-202ENST00000593832 CFAP45Q9UL16 551 aa16.61■□□□□ 0.25
COLGALT1-202ENST00000593832 PIK3C2AO00443 1686 aa16.61■□□□□ 0.25
COLGALT1-202ENST00000593832 SLU7O95391 586 aaKnown RBP16.61■□□□□ 0.25
COLGALT1-202ENST00000593832 GOLPH3LQ9H4A5 285 aa16.61■□□□□ 0.25
COLGALT1-202ENST00000593832 ZSCAN16Q9H4T2 348 aaPredicted RBP16.61■□□□□ 0.25
COLGALT1-202ENST00000593832 CTAGE5O15320 804 aa16.6■□□□□ 0.25
COLGALT1-202ENST00000593832 FSD1Q9BTV5 496 aa16.6■□□□□ 0.25
COLGALT1-202ENST00000593832 BOLA2Q9H3K6 86 aa16.6■□□□□ 0.25
COLGALT1-202ENST00000593832 C9orf78Q9NZ63 289 aaPredicted RBP16.6■□□□□ 0.25
COLGALT1-202ENST00000593832 CEBPZQ03701 1054 aaKnown RBP16.6■□□□□ 0.25
COLGALT1-202ENST00000593832 USPL1Q5W0Q7 1092 aa16.6■□□□□ 0.25
COLGALT1-202ENST00000593832 LGR6Q9HBX8 967 aa16.6■□□□□ 0.25
COLGALT1-202ENST00000593832 RCOR1Q9UKL0 485 aa16.6■□□□□ 0.25
COLGALT1-202ENST00000593832 ANKARQ7Z5J8 1434 aa16.6■□□□□ 0.25
COLGALT1-202ENST00000593832 TAF5LO75529 589 aa16.59■□□□□ 0.25
COLGALT1-202ENST00000593832 CCAR1Q8IX12 1150 aaKnown RBP16.59■□□□□ 0.25
COLGALT1-202ENST00000593832 BANK1Q8NDB2 785 aa16.59■□□□□ 0.25
COLGALT1-202ENST00000593832 KAZALD1Q96I82 304 aa16.59■□□□□ 0.25
COLGALT1-202ENST00000593832 FTOQ9C0B1 505 aaKnown RBP eCLIP16.59■□□□□ 0.25
COLGALT1-202ENST00000593832 BECN2A8MW95 431 aa16.59■□□□□ 0.25
COLGALT1-202ENST00000593832 NPHP1O15259 732 aa16.59■□□□□ 0.25
COLGALT1-202ENST00000593832 C10orf67Q8IYJ2 551 aa16.59■□□□□ 0.25
COLGALT1-202ENST00000593832 MED1Q15648 1581 aaPredicted RBP16.59■□□□□ 0.25
COLGALT1-202ENST00000593832 H3BQV1 296 aa16.59■□□□□ 0.25
COLGALT1-202ENST00000593832 ALDH1L1O75891 902 aa16.59■□□□□ 0.25
COLGALT1-202ENST00000593832 IFFO2Q5TF58 517 aa16.59■□□□□ 0.25
COLGALT1-202ENST00000593832 NBPF11Q86T75 865 aa16.59■□□□□ 0.25
COLGALT1-202ENST00000593832 USHBP1Q8N6Y0 703 aa16.59■□□□□ 0.25
COLGALT1-202ENST00000593832 L2HGDHQ9H9P8 463 aa16.59■□□□□ 0.25
COLGALT1-202ENST00000593832 MAP3K2Q9Y2U5 619 aa16.59■□□□□ 0.25
COLGALT1-202ENST00000593832 COL15A1P39059 1388 aa16.58■□□□□ 0.25
COLGALT1-202ENST00000593832 MMP14P50281 582 aa16.58■□□□□ 0.24
COLGALT1-202ENST00000593832 RAD51AP2Q09MP3 1159 aa16.58■□□□□ 0.24
COLGALT1-202ENST00000593832 CWF19L2Q2TBE0 894 aaKnown RBP16.58■□□□□ 0.24
COLGALT1-202ENST00000593832 ENGASEQ8NFI3 743 aa16.58■□□□□ 0.24
COLGALT1-202ENST00000593832 H2AFXP16104 143 aaPredicted RBP16.58■□□□□ 0.24
COLGALT1-202ENST00000593832 BCCIPQ9P287 314 aaKnown RBP eCLIP16.58■□□□□ 0.24
COLGALT1-202ENST00000593832 E4F1Q66K89 784 aaPredicted RBP16.57■□□□□ 0.24
COLGALT1-202ENST00000593832 OSBPL5Q9H0X9 879 aaPredicted RBP16.57■□□□□ 0.24
COLGALT1-202ENST00000593832 SMARCC2Q8TAQ2 1214 aa16.57■□□□□ 0.24
COLGALT1-202ENST00000593832 NEK1Q96PY6 1258 aa16.57■□□□□ 0.24
COLGALT1-202ENST00000593832 ANO10Q9NW15 660 aa16.57■□□□□ 0.24
COLGALT1-202ENST00000593832 KDM3BQ7LBC6 1761 aa16.57■□□□□ 0.24
COLGALT1-202ENST00000593832 KIF2AO00139 706 aaPredicted RBP16.56■□□□□ 0.24
COLGALT1-202ENST00000593832 TRIM66O15016 1216 aa16.56■□□□□ 0.24
COLGALT1-202ENST00000593832 SCRN1Q12765 414 aa16.56■□□□□ 0.24
COLGALT1-202ENST00000593832 Q6ZUG5 572 aa16.56■□□□□ 0.24
COLGALT1-202ENST00000593832 KRT32Q14532 448 aa16.56■□□□□ 0.24
COLGALT1-202ENST00000593832 EDC3Q96F86 508 aaKnown RBP16.56■□□□□ 0.24
COLGALT1-202ENST00000593832 SUCLG2Q96I99 432 aa16.56■□□□□ 0.24
COLGALT1-202ENST00000593832 DBF4Q9UBU7 674 aaPredicted RBP16.56■□□□□ 0.24
COLGALT1-202ENST00000593832 GSDMDP57764 484 aa16.56■□□□□ 0.24
COLGALT1-202ENST00000593832 G3BP1Q13283 466 aaKnown RBP eCLIP16.56■□□□□ 0.24
COLGALT1-202ENST00000593832 ERCC6LQ2NKX8 1250 aa16.56■□□□□ 0.24
COLGALT1-202ENST00000593832 PROSER3Q2NL68 480 aa16.56■□□□□ 0.24
COLGALT1-202ENST00000593832 CCDC93Q567U6 631 aa16.56■□□□□ 0.24
COLGALT1-202ENST00000593832 AOPEPQ8N6M6 819 aa16.56■□□□□ 0.24
COLGALT1-202ENST00000593832 LRRN4CLQ8ND94 238 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms