RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 LAPTM4AQ15012 233 aa9.24□□□□□ -0.93
SMAD4-210ENST00000590061 TSPYL6Q8N831 410 aa9.24□□□□□ -0.93
SMAD4-210ENST00000590061 SHANK3Q9BYB0 1731 aa9.24□□□□□ -0.93
SMAD4-210ENST00000590061 IBTKQ9P2D0 1353 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-210ENST00000590061 LOC102724428A0A0B4J2F2 783 aa9.23□□□□□ -0.93
SMAD4-210ENST00000590061 BCAR3O75815 825 aa9.23□□□□□ -0.93
SMAD4-210ENST00000590061 HSP90B1P14625 803 aaKnown RBP9.23□□□□□ -0.93
SMAD4-210ENST00000590061 SIK1P57059 783 aa9.23□□□□□ -0.93
SMAD4-210ENST00000590061 NEXNQ0ZGT2 675 aa9.23□□□□□ -0.93
SMAD4-210ENST00000590061 SLC39A6Q13433 755 aa9.23□□□□□ -0.93
SMAD4-210ENST00000590061 SF3B2Q13435 895 aaKnown RBP9.23□□□□□ -0.93
SMAD4-210ENST00000590061 FKBP5Q13451 457 aaPredicted RBP9.23□□□□□ -0.93
SMAD4-210ENST00000590061 GRIPAP1Q4V328 841 aa9.23□□□□□ -0.93
SMAD4-210ENST00000590061 SPRYD7Q5W111 196 aa9.23□□□□□ -0.93
SMAD4-210ENST00000590061 KRI1Q8N9T8 703 aaKnown RBP9.23□□□□□ -0.93
SMAD4-210ENST00000590061 NOB1Q9ULX3 412 aaKnown RBP9.23□□□□□ -0.93
SMAD4-210ENST00000590061 ITGB4P16144 1822 aa9.22□□□□□ -0.93
SMAD4-210ENST00000590061 NRG2O14511 850 aaPredicted RBP9.22□□□□□ -0.93
SMAD4-210ENST00000590061 GFRA3O60609 400 aa9.22□□□□□ -0.93
SMAD4-210ENST00000590061 PTCD1O75127 700 aaKnown RBP9.22□□□□□ -0.93
SMAD4-210ENST00000590061 FLIIQ13045 1269 aa9.22□□□□□ -0.93
SMAD4-210ENST00000590061 HSP90AB3PQ58FF7 597 aa9.22□□□□□ -0.93
SMAD4-210ENST00000590061 RC3H1Q5TC82 1133 aaKnown RBP9.22□□□□□ -0.93
SMAD4-210ENST00000590061 ASAP1Q9ULH1 1129 aa9.22□□□□□ -0.93
SMAD4-210ENST00000590061 ZNF831Q5JPB2 1677 aa9.22□□□□□ -0.93
SMAD4-210ENST00000590061 PALLDQ8WX93 1383 aa9.22□□□□□ -0.93
SMAD4-210ENST00000590061 PLSCR1O15162 318 aa9.21□□□□□ -0.94
SMAD4-210ENST00000590061 GNAI3P08754 354 aa9.21□□□□□ -0.94
SMAD4-210ENST00000590061 IL6STP40189 918 aaPredicted RBP9.21□□□□□ -0.94
SMAD4-210ENST00000590061 TMEM132AQ24JP5 1023 aa9.21□□□□□ -0.94
SMAD4-210ENST00000590061 KSR2Q6VAB6 950 aa9.21□□□□□ -0.94
SMAD4-210ENST00000590061 GIGYF2Q6Y7W6 1299 aaKnown RBP9.21□□□□□ -0.94
SMAD4-210ENST00000590061 KIF6Q6ZMV9 814 aa9.21□□□□□ -0.94
SMAD4-210ENST00000590061 ZNF598Q86UK7 904 aaKnown RBP9.21□□□□□ -0.94
SMAD4-210ENST00000590061 PPP4R2Q9NY27 417 aa9.21□□□□□ -0.94
SMAD4-210ENST00000590061 UBR2Q8IWV8 1755 aa9.2□□□□□ -0.94
SMAD4-210ENST00000590061 TRIM66O15016 1216 aa9.2□□□□□ -0.94
SMAD4-210ENST00000590061 KCNQ3O43525 872 aa9.2□□□□□ -0.94
SMAD4-210ENST00000590061 ALDH1L1O75891 902 aa9.2□□□□□ -0.94
SMAD4-210ENST00000590061 GUCA2AQ02747 115 aa9.2□□□□□ -0.94
SMAD4-210ENST00000590061 MVPQ14764 893 aaKnown RBP9.2□□□□□ -0.94
SMAD4-210ENST00000590061 Q3C1V9 767 aa9.2□□□□□ -0.94
SMAD4-210ENST00000590061 INTS3Q68E01 1043 aaKnown RBP9.2□□□□□ -0.94
SMAD4-210ENST00000590061 PARP9Q8IXQ6 854 aa9.2□□□□□ -0.94
SMAD4-210ENST00000590061 FLAD1Q8NFF5 587 aa9.2□□□□□ -0.94
SMAD4-210ENST00000590061 ACSBG1Q96GR2 724 aa9.2□□□□□ -0.94
SMAD4-210ENST00000590061 CHPF2Q9P2E5 772 aa9.2□□□□□ -0.94
SMAD4-210ENST00000590061 ZNF652Q9Y2D9 606 aa9.2□□□□□ -0.94
SMAD4-210ENST00000590061 FCF1Q9Y324 198 aaKnown RBP9.2□□□□□ -0.94
SMAD4-210ENST00000590061 PAPPAQ13219 1627 aa9.2□□□□□ -0.94
SMAD4-210ENST00000590061 NHSQ6T4R5 1651 aa9.2□□□□□ -0.94
SMAD4-210ENST00000590061 ERVV-1B6SEH8 477 aa9.19□□□□□ -0.94
SMAD4-210ENST00000590061 CYP19A1P11511 503 aaPredicted RBP9.19□□□□□ -0.94
SMAD4-210ENST00000590061 TRIM27P14373 513 aa9.19□□□□□ -0.94
SMAD4-210ENST00000590061 SSTR3P32745 418 aaPredicted RBP9.19□□□□□ -0.94
SMAD4-210ENST00000590061 MMP16P51512 607 aa9.19□□□□□ -0.94
SMAD4-210ENST00000590061 Q6ZNB5 142 aa9.19□□□□□ -0.94
SMAD4-210ENST00000590061 RIC3Q7Z5B4 369 aa9.19□□□□□ -0.94
SMAD4-210ENST00000590061 PLBD2Q8NHP8 589 aa9.19□□□□□ -0.94
SMAD4-210ENST00000590061 DNAAF4Q8WXU2 420 aa9.19□□□□□ -0.94
SMAD4-210ENST00000590061 BCL2L13Q9BXK5 485 aa9.19□□□□□ -0.94
SMAD4-210ENST00000590061 CCDC87Q9NVE4 849 aa9.19□□□□□ -0.94
SMAD4-210ENST00000590061 CCNL1Q9UK58 526 aaPredicted RBP9.19□□□□□ -0.94
SMAD4-210ENST00000590061 ABCC4O15439 1325 aa9.19□□□□□ -0.94
SMAD4-210ENST00000590061 CNTNAP4Q9C0A0 1308 aa9.19□□□□□ -0.94
SMAD4-210ENST00000590061 PXDNLA1KZ92 1463 aa9.19□□□□□ -0.94
SMAD4-210ENST00000590061 DOT1LQ8TEK3 1739 aa9.19□□□□□ -0.94
SMAD4-210ENST00000590061 PRR20EP86478 221 aa9.18□□□□□ -0.94
SMAD4-210ENST00000590061 PRR20CP86479 221 aa9.18□□□□□ -0.94
SMAD4-210ENST00000590061 PRR20DP86480 221 aa9.18□□□□□ -0.94
SMAD4-210ENST00000590061 PRR20BP86481 221 aa9.18□□□□□ -0.94
SMAD4-210ENST00000590061 PRR20AP86496 221 aa9.18□□□□□ -0.94
SMAD4-210ENST00000590061 TTLL12Q14166 644 aaPredicted RBP9.18□□□□□ -0.94
SMAD4-210ENST00000590061 KRT24Q2M2I5 525 aa9.18□□□□□ -0.94
SMAD4-210ENST00000590061 KCPQ6ZWJ8 1503 aa9.18□□□□□ -0.94
SMAD4-210ENST00000590061 ITPRIPQ8IWB1 547 aa9.18□□□□□ -0.94
SMAD4-210ENST00000590061 LINS1Q8NG48 757 aa9.18□□□□□ -0.94
SMAD4-210ENST00000590061 SRCIN1Q9C0H9 1055 aa9.18□□□□□ -0.94
SMAD4-210ENST00000590061 PDZRN3Q9UPQ7 1066 aa9.18□□□□□ -0.94
SMAD4-210ENST00000590061 USP16Q9Y5T5 823 aa9.18□□□□□ -0.94
SMAD4-210ENST00000590061 LAMB4A4D0S4 1761 aa9.17□□□□□ -0.94
SMAD4-210ENST00000590061 TOGARAM1Q9Y4F4 1720 aa9.17□□□□□ -0.94
SMAD4-210ENST00000590061 CICQ96RK0 1608 aaPredicted RBP9.17□□□□□ -0.94
SMAD4-210ENST00000590061 KCNQ2O43526 872 aa9.17□□□□□ -0.94
SMAD4-210ENST00000590061 HMMRO75330 724 aa9.17□□□□□ -0.94
SMAD4-210ENST00000590061 DXOO77932 396 aaKnown RBP9.17□□□□□ -0.94
SMAD4-210ENST00000590061 ZNF697Q5TEC3 545 aa9.17□□□□□ -0.94
SMAD4-210ENST00000590061 CLEC4GQ6UXB4 293 aa9.17□□□□□ -0.94
SMAD4-210ENST00000590061 DNAJC10Q8IXB1 793 aa9.17□□□□□ -0.94
SMAD4-210ENST00000590061 SPIRE2Q8WWL2 714 aa9.17□□□□□ -0.94
SMAD4-210ENST00000590061 ATP10DQ9P241 1426 aa9.16□□□□□ -0.94
SMAD4-210ENST00000590061 SRCAPQ6ZRS2 3230 aa9.16□□□□□ -0.94
SMAD4-210ENST00000590061 PI4KAP2A4QPH2 592 aa9.16□□□□□ -0.94
SMAD4-210ENST00000590061 GDF9O60383 454 aa9.16□□□□□ -0.94
SMAD4-210ENST00000590061 TRIM37O94972 964 aa9.16□□□□□ -0.94
SMAD4-210ENST00000590061 APBA3O96018 575 aa9.16□□□□□ -0.94
SMAD4-210ENST00000590061 MYL6BP14649 208 aa9.16□□□□□ -0.94
SMAD4-210ENST00000590061 BAG6P46379 1132 aa9.16□□□□□ -0.94
SMAD4-210ENST00000590061 RPIAP49247 311 aa9.16□□□□□ -0.94
SMAD4-210ENST00000590061 TRIM28Q13263 835 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms