RNA–Protein interactions for RNA: ENST00000589663.5

BECN1-212, Transcript of beclin 1, humanhuman

TSL 3

Gene BECN1, Length 489 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-212ENST00000589663 ZBTB3Q9H5J0 574 aa11.99□□□□□ -0.49
BECN1-212ENST00000589663 BCL9O00512 1426 aa11.99□□□□□ -0.49
BECN1-212ENST00000589663 RFX7Q2KHR2 1363 aa11.98□□□□□ -0.49
BECN1-212ENST00000589663 GOLGA6L22H0YM25 854 aa11.98□□□□□ -0.49
BECN1-212ENST00000589663 MCM4P33991 863 aa11.98□□□□□ -0.49
BECN1-212ENST00000589663 CASP7P55210 303 aa11.98□□□□□ -0.49
BECN1-212ENST00000589663 ATG3Q9NT62 314 aa11.98□□□□□ -0.49
BECN1-212ENST00000589663 MAP3K7O43318 606 aa11.97□□□□□ -0.49
BECN1-212ENST00000589663 DDIT3P35638 169 aa11.97□□□□□ -0.49
BECN1-212ENST00000589663 RFX5P48382 616 aaPredicted RBP11.97□□□□□ -0.49
BECN1-212ENST00000589663 NEK4P51957 841 aa11.97□□□□□ -0.49
BECN1-212ENST00000589663 MDM2Q00987 491 aaPredicted RBP11.97□□□□□ -0.49
BECN1-212ENST00000589663 PTPN12Q05209 780 aaKnown RBP11.97□□□□□ -0.49
BECN1-212ENST00000589663 EN1Q05925 392 aaPredicted RBP11.97□□□□□ -0.49
BECN1-212ENST00000589663 TCIRG1Q13488 830 aa11.97□□□□□ -0.49
BECN1-212ENST00000589663 RAB3GAP1Q15042 981 aa11.97□□□□□ -0.49
BECN1-212ENST00000589663 TNNI3KQ59H18 835 aa11.97□□□□□ -0.49
BECN1-212ENST00000589663 EPHA10Q5JZY3 1008 aa11.97□□□□□ -0.49
BECN1-212ENST00000589663 LMBR1LQ6UX01 489 aa11.97□□□□□ -0.49
BECN1-212ENST00000589663 DNAJC10Q8IXB1 793 aa11.97□□□□□ -0.49
BECN1-212ENST00000589663 PTCD2Q8WV60 388 aaKnown RBP11.97□□□□□ -0.49
BECN1-212ENST00000589663 IL17RAQ96F46 866 aa11.97□□□□□ -0.49
BECN1-212ENST00000589663 CCDC8Q9H0W5 538 aaPredicted RBP11.97□□□□□ -0.49
BECN1-212ENST00000589663 NPDC1Q9NQX5 325 aaPredicted RBP11.97□□□□□ -0.49
BECN1-212ENST00000589663 ASAP1Q9ULH1 1129 aa11.97□□□□□ -0.49
BECN1-212ENST00000589663 ZNF330Q9Y3S2 320 aaPredicted RBP11.97□□□□□ -0.49
BECN1-212ENST00000589663 FPGT-TNNI3KV9GXZ4 949 aa11.97□□□□□ -0.49
BECN1-212ENST00000589663 MYH3P11055 1940 aa11.96□□□□□ -0.49
BECN1-212ENST00000589663 SPATA31A1Q5TZJ5 1347 aa11.96□□□□□ -0.49
BECN1-212ENST00000589663 MAP3K15Q6ZN16 1313 aa11.96□□□□□ -0.49
BECN1-212ENST00000589663 CD2BP2O95400 341 aaKnown RBP11.96□□□□□ -0.49
BECN1-212ENST00000589663 HSPA4P34932 840 aa11.96□□□□□ -0.49
BECN1-212ENST00000589663 IL15P40933 162 aaPredicted RBP11.96□□□□□ -0.49
BECN1-212ENST00000589663 TRIM28Q13263 835 aaKnown RBP11.96□□□□□ -0.49
BECN1-212ENST00000589663 DDB1Q16531 1140 aa11.96□□□□□ -0.49
BECN1-212ENST00000589663 CWC27Q6UX04 472 aaKnown RBP11.96□□□□□ -0.49
BECN1-212ENST00000589663 EAF2Q96CJ1 260 aaPredicted RBP11.96□□□□□ -0.49
BECN1-212ENST00000589663 FSD1Q9BTV5 496 aa11.96□□□□□ -0.49
BECN1-212ENST00000589663 ISCA1Q9BUE6 129 aa11.96□□□□□ -0.49
BECN1-212ENST00000589663 GPR108Q9NPR9 543 aa11.96□□□□□ -0.49
BECN1-212ENST00000589663 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.96□□□□□ -0.49
BECN1-212ENST00000589663 CIAO1O76071 339 aa11.95□□□□□ -0.5
BECN1-212ENST00000589663 ADAMTS2O95450 1211 aa11.95□□□□□ -0.5
BECN1-212ENST00000589663 PCCAP05165 728 aaPredicted RBP11.95□□□□□ -0.5
BECN1-212ENST00000589663 ATP5JP18859 108 aa11.95□□□□□ -0.5
BECN1-212ENST00000589663 FOXO4P98177 505 aa11.95□□□□□ -0.5
BECN1-212ENST00000589663 TFCP2Q12800 502 aa11.95□□□□□ -0.5
BECN1-212ENST00000589663 TICAM2Q86XR7 235 aa11.95□□□□□ -0.5
BECN1-212ENST00000589663 SYTL4Q96C24 671 aaPredicted RBP11.95□□□□□ -0.5
BECN1-212ENST00000589663 PHOX2BQ99453 314 aa11.95□□□□□ -0.5
BECN1-212ENST00000589663 SPEF2Q9C093 1822 aa11.95□□□□□ -0.5
BECN1-212ENST00000589663 CICQ96RK0 1608 aaPredicted RBP11.94□□□□□ -0.5
BECN1-212ENST00000589663 ZKSCAN1P17029 563 aaPredicted RBP11.94□□□□□ -0.5
BECN1-212ENST00000589663 KCNJ4P48050 445 aa11.94□□□□□ -0.5
BECN1-212ENST00000589663 CCDC57Q2TAC2 916 aa11.94□□□□□ -0.5
BECN1-212ENST00000589663 SKOR2Q2VWA4 1001 aaPredicted RBP11.94□□□□□ -0.5
BECN1-212ENST00000589663 TAF7LQ5H9L4 462 aa11.94□□□□□ -0.5
BECN1-212ENST00000589663 JARID2Q92833 1246 aaPredicted RBP11.94□□□□□ -0.5
BECN1-212ENST00000589663 TMUB1Q9BVT8 246 aa11.94□□□□□ -0.5
BECN1-212ENST00000589663 LSG1Q9H089 658 aaKnown RBP11.94□□□□□ -0.5
BECN1-212ENST00000589663 BOLA2Q9H3K6 86 aa11.94□□□□□ -0.5
BECN1-212ENST00000589663 ANO8Q9HCE9 1232 aaPredicted RBP11.94□□□□□ -0.5
BECN1-212ENST00000589663 CCDC9Q9Y3X0 531 aaKnown RBP11.94□□□□□ -0.5
BECN1-212ENST00000589663 NUP98P52948 1817 aa11.94□□□□□ -0.5
BECN1-212ENST00000589663 CDHR2Q9BYE9 1310 aa11.93□□□□□ -0.5
BECN1-212ENST00000589663 NUTM2BA6NNL0 878 aaPredicted RBP11.93□□□□□ -0.5
BECN1-212ENST00000589663 NUTM2EB1AL46 878 aaPredicted RBP11.93□□□□□ -0.5
BECN1-212ENST00000589663 EYA2O00167 538 aa11.93□□□□□ -0.5
BECN1-212ENST00000589663 CLCN1P35523 988 aa11.93□□□□□ -0.5
BECN1-212ENST00000589663 TSR1Q2NL82 804 aaKnown RBP11.93□□□□□ -0.5
BECN1-212ENST00000589663 LRRFIP1Q32MZ4 808 aaKnown RBP11.93□□□□□ -0.5
BECN1-212ENST00000589663 SH3D19Q5HYK7 790 aa11.93□□□□□ -0.5
BECN1-212ENST00000589663 RNF20Q5VTR2 975 aa11.93□□□□□ -0.5
BECN1-212ENST00000589663 NUTM2AQ8IVF1 878 aaPredicted RBP11.93□□□□□ -0.5
BECN1-212ENST00000589663 KLHDC4Q8TBB5 520 aa11.93□□□□□ -0.5
BECN1-212ENST00000589663 PLA2G12BQ9BX93 195 aa11.93□□□□□ -0.5
BECN1-212ENST00000589663 AKAP2Q9Y2D5 859 aa11.93□□□□□ -0.5
BECN1-212ENST00000589663 SPATA31A5Q5VU36 1347 aa11.92□□□□□ -0.5
BECN1-212ENST00000589663 CCDC171Q6TFL3 1326 aa11.92□□□□□ -0.5
BECN1-212ENST00000589663 SPATA31A7Q8IWB4 1347 aa11.92□□□□□ -0.5
BECN1-212ENST00000589663 A0A0G2JS52 829 aa11.92□□□□□ -0.5
BECN1-212ENST00000589663 ERVV-1B6SEH8 477 aa11.92□□□□□ -0.5
BECN1-212ENST00000589663 PHF14O94880 888 aa11.92□□□□□ -0.5
BECN1-212ENST00000589663 CYP19A1P11511 503 aaPredicted RBP11.92□□□□□ -0.5
BECN1-212ENST00000589663 IL6STP40189 918 aaPredicted RBP11.92□□□□□ -0.5
BECN1-212ENST00000589663 ZBTB38Q8NAP3 1195 aaPredicted RBP11.92□□□□□ -0.5
BECN1-212ENST00000589663 SMARCC1Q92922 1105 aaPredicted RBP11.92□□□□□ -0.5
BECN1-212ENST00000589663 TNPO1Q92973 898 aaKnown RBP11.92□□□□□ -0.5
BECN1-212ENST00000589663 INTS4Q96HW7 963 aaKnown RBP11.92□□□□□ -0.5
BECN1-212ENST00000589663 GPCPD1Q9NPB8 672 aa11.92□□□□□ -0.5
BECN1-212ENST00000589663 TLR7Q9NYK1 1049 aaKnown RBP11.92□□□□□ -0.5
BECN1-212ENST00000589663 CEP126Q9P2H0 1117 aa11.92□□□□□ -0.5
BECN1-212ENST00000589663 ZNF609O15014 1411 aa11.92□□□□□ -0.5
BECN1-212ENST00000589663 SLIT2O94813 1529 aa11.91□□□□□ -0.5
BECN1-212ENST00000589663 RREB1Q92766 1687 aa11.91□□□□□ -0.5
BECN1-212ENST00000589663 HSP90B1P14625 803 aaKnown RBP11.91□□□□□ -0.5
BECN1-212ENST00000589663 PSMA5P28066 241 aa11.91□□□□□ -0.5
BECN1-212ENST00000589663 PIP4K2BP78356 416 aa11.91□□□□□ -0.5
BECN1-212ENST00000589663 NMIQ13287 307 aaPredicted RBP11.91□□□□□ -0.5
BECN1-212ENST00000589663 NLRP7Q8WX94 980 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms