RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 IPO7O95373 1038 aaKnown RBP6.75□□□□□ -1.33
LINC01538-201ENST00000588074 SCNN1DP51172 638 aa6.75□□□□□ -1.33
LINC01538-201ENST00000588074 UVSSAQ2YD98 709 aa6.75□□□□□ -1.33
LINC01538-201ENST00000588074 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.75□□□□□ -1.33
LINC01538-201ENST00000588074 CCDC91Q7Z6B0 441 aa6.75□□□□□ -1.33
LINC01538-201ENST00000588074 PDCL2Q8N4E4 241 aa6.75□□□□□ -1.33
LINC01538-201ENST00000588074 NUDT12Q9BQG2 462 aa6.75□□□□□ -1.33
LINC01538-201ENST00000588074 SUFUQ9UMX1 484 aa6.75□□□□□ -1.33
LINC01538-201ENST00000588074 NUB1Q9Y5A7 615 aa6.75□□□□□ -1.33
LINC01538-201ENST00000588074 USP31Q70CQ4 1352 aa6.74□□□□□ -1.33
LINC01538-201ENST00000588074 ACTN4O43707 911 aaKnown RBP6.74□□□□□ -1.33
LINC01538-201ENST00000588074 HCLS1P14317 486 aaPredicted RBP6.74□□□□□ -1.33
LINC01538-201ENST00000588074 EIF4BP23588 611 aaKnown RBP6.74□□□□□ -1.33
LINC01538-201ENST00000588074 PSEN2P49810 448 aa6.74□□□□□ -1.33
LINC01538-201ENST00000588074 CDKN1CP49918 316 aaPredicted RBP6.74□□□□□ -1.33
LINC01538-201ENST00000588074 CHMP4BP1P59074 171 aa6.74□□□□□ -1.33
LINC01538-201ENST00000588074 RAB15P59190 212 aa6.74□□□□□ -1.33
LINC01538-201ENST00000588074 BIRC2Q13490 618 aa6.74□□□□□ -1.33
LINC01538-201ENST00000588074 ERFEQ4G0M1 354 aa6.74□□□□□ -1.33
LINC01538-201ENST00000588074 C4orf48Q5BLP8 95 aa6.74□□□□□ -1.33
LINC01538-201ENST00000588074 ERMP1Q7Z2K6 904 aa6.74□□□□□ -1.33
LINC01538-201ENST00000588074 SH3RF1Q7Z6J0 888 aa6.74□□□□□ -1.33
LINC01538-201ENST00000588074 JAMLQ86YT9 394 aa6.74□□□□□ -1.33
LINC01538-201ENST00000588074 SDR16C5Q8N3Y7 309 aa6.74□□□□□ -1.33
LINC01538-201ENST00000588074 RASGRP4Q8TDF6 673 aa6.74□□□□□ -1.33
LINC01538-201ENST00000588074 CXorf56Q9H5V9 222 aa6.74□□□□□ -1.33
LINC01538-201ENST00000588074 ANAPC4Q9UJX5 808 aa6.74□□□□□ -1.33
LINC01538-201ENST00000588074 ATAD2BQ9ULI0 1458 aa6.74□□□□□ -1.33
LINC01538-201ENST00000588074 MCM4P33991 863 aa6.74□□□□□ -1.33
LINC01538-201ENST00000588074 PTCRAQ6ISU1 281 aaPredicted RBP6.74□□□□□ -1.33
LINC01538-201ENST00000588074 ALKBH2Q6NS38 261 aa6.74□□□□□ -1.33
LINC01538-201ENST00000588074 FERMT3Q86UX7 667 aa6.74□□□□□ -1.33
LINC01538-201ENST00000588074 KBTBD4Q9NVX7 518 aa6.74□□□□□ -1.33
LINC01538-201ENST00000588074 SERTAD1Q9UHV2 236 aa6.74□□□□□ -1.33
LINC01538-201ENST00000588074 PNMA2Q9UL42 364 aa6.74□□□□□ -1.33
LINC01538-201ENST00000588074 PRKAB1Q9Y478 270 aa6.74□□□□□ -1.33
LINC01538-201ENST00000588074 EID1Q9Y6B2 187 aa6.74□□□□□ -1.33
LINC01538-201ENST00000588074 CEP162Q5TB80 1403 aa6.73□□□□□ -1.33
LINC01538-201ENST00000588074 CCDC196A0A1B0GTZ2 297 aa6.73□□□□□ -1.33
LINC01538-201ENST00000588074 PRC1O43663 620 aa6.73□□□□□ -1.33
LINC01538-201ENST00000588074 EIF3JO75822 258 aaKnown RBP6.73□□□□□ -1.33
LINC01538-201ENST00000588074 APLP1P51693 650 aa6.73□□□□□ -1.33
LINC01538-201ENST00000588074 GSCP56915 257 aaPredicted RBP6.73□□□□□ -1.33
LINC01538-201ENST00000588074 RAB33AQ14088 237 aa6.73□□□□□ -1.33
LINC01538-201ENST00000588074 KMT5BQ4FZB7 885 aa6.73□□□□□ -1.33
LINC01538-201ENST00000588074 ETFBKMTQ8IXQ9 262 aa6.73□□□□□ -1.33
LINC01538-201ENST00000588074 EDEM1Q92611 657 aa6.73□□□□□ -1.33
LINC01538-201ENST00000588074 NUCKS1Q9H1E3 243 aaKnown RBP6.73□□□□□ -1.33
LINC01538-201ENST00000588074 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.73□□□□□ -1.33
LINC01538-201ENST00000588074 GOLGA6L6A8MZA4 724 aa6.72□□□□□ -1.33
LINC01538-201ENST00000588074 POLD1P28340 1107 aa6.72□□□□□ -1.33
LINC01538-201ENST00000588074 TERF2Q15554 542 aa6.72□□□□□ -1.33
LINC01538-201ENST00000588074 ZRSR2Q15696 482 aaKnown RBP6.72□□□□□ -1.33
LINC01538-201ENST00000588074 USPL1Q5W0Q7 1092 aa6.72□□□□□ -1.33
LINC01538-201ENST00000588074 SCUBE3Q8IX30 993 aa6.72□□□□□ -1.33
LINC01538-201ENST00000588074 TBC1D22AQ8WUA7 517 aa6.72□□□□□ -1.33
LINC01538-201ENST00000588074 SLC39A7Q92504 469 aa6.72□□□□□ -1.33
LINC01538-201ENST00000588074 SIN3AQ96ST3 1273 aa6.72□□□□□ -1.33
LINC01538-201ENST00000588074 DNAJC7Q99615 494 aa6.72□□□□□ -1.33
LINC01538-201ENST00000588074 TRIM55Q9BYV6 548 aa6.72□□□□□ -1.33
LINC01538-201ENST00000588074 SUDS3Q9H7L9 328 aaPredicted RBP6.72□□□□□ -1.33
LINC01538-201ENST00000588074 GOLGA6L22H0YM25 854 aa6.72□□□□□ -1.33
LINC01538-201ENST00000588074 MASP1P48740 699 aa6.72□□□□□ -1.33
LINC01538-201ENST00000588074 HDGFP51858 240 aaKnown RBP6.72□□□□□ -1.33
LINC01538-201ENST00000588074 KIAA0907Q7Z7F0 614 aaPredicted RBP6.72□□□□□ -1.33
LINC01538-201ENST00000588074 ARMC2Q8NEN0 867 aa6.72□□□□□ -1.33
LINC01538-201ENST00000588074 FBF1Q8TES7 1133 aa6.72□□□□□ -1.33
LINC01538-201ENST00000588074 EMID1Q96A84 441 aaPredicted RBP6.72□□□□□ -1.33
LINC01538-201ENST00000588074 SIRPGQ9P1W8 387 aa6.72□□□□□ -1.33
LINC01538-201ENST00000588074 CNTN3Q9P232 1028 aa6.72□□□□□ -1.33
LINC01538-201ENST00000588074 NUDCQ9Y266 331 aa6.72□□□□□ -1.33
LINC01538-201ENST00000588074 EFR3BQ9Y2G0 817 aa6.72□□□□□ -1.33
LINC01538-201ENST00000588074 PDGFAP04085 211 aa6.71□□□□□ -1.33
LINC01538-201ENST00000588074 HSP90AB1P08238 724 aaKnown RBP6.71□□□□□ -1.33
LINC01538-201ENST00000588074 HSPA5P11021 654 aaKnown RBP6.71□□□□□ -1.33
LINC01538-201ENST00000588074 SCP2P22307 547 aa6.71□□□□□ -1.33
LINC01538-201ENST00000588074 CASQ1P31415 396 aa6.71□□□□□ -1.33
LINC01538-201ENST00000588074 NFX1Q12986 1120 aaKnown RBP6.71□□□□□ -1.33
LINC01538-201ENST00000588074 SQSTM1Q13501 440 aa6.71□□□□□ -1.33
LINC01538-201ENST00000588074 FAM98CQ17RN3 349 aaKnown RBP6.71□□□□□ -1.33
LINC01538-201ENST00000588074 C1QTNF12Q5T7M4 302 aa6.71□□□□□ -1.33
LINC01538-201ENST00000588074 DDX46Q7L014 1031 aaKnown RBP6.71□□□□□ -1.33
LINC01538-201ENST00000588074 C11orf96Q7Z7L8 435 aa6.71□□□□□ -1.33
LINC01538-201ENST00000588074 CELF2-AS1Q8N7Q2 184 aa6.71□□□□□ -1.33
LINC01538-201ENST00000588074 GOLGA6L1Q8N7Z2 621 aa6.71□□□□□ -1.33
LINC01538-201ENST00000588074 EPS8L3Q8TE67 593 aaKnown RBP6.71□□□□□ -1.33
LINC01538-201ENST00000588074 NOL10Q9BSC4 688 aaKnown RBP6.71□□□□□ -1.33
LINC01538-201ENST00000588074 ADAMTS1Q9UHI8 967 aa6.71□□□□□ -1.33
LINC01538-201ENST00000588074 SMC3Q9UQE7 1217 aa6.71□□□□□ -1.33
LINC01538-201ENST00000588074 ZKSCAN5Q9Y2L8 839 aa6.71□□□□□ -1.33
LINC01538-201ENST00000588074 PPP1R12BO60237 982 aaPredicted RBP6.71□□□□□ -1.34
LINC01538-201ENST00000588074 TPM3P06753 285 aa6.71□□□□□ -1.34
LINC01538-201ENST00000588074 C4orf46Q504U0 113 aa6.71□□□□□ -1.34
LINC01538-201ENST00000588074 WDR75Q8IWA0 830 aaKnown RBP6.71□□□□□ -1.34
LINC01538-201ENST00000588074 NME8Q8N427 588 aa6.71□□□□□ -1.34
LINC01538-201ENST00000588074 PRPF38AQ8NAV1 312 aaKnown RBP6.71□□□□□ -1.34
LINC01538-201ENST00000588074 PNISRQ8TF01 805 aaKnown RBP6.71□□□□□ -1.34
LINC01538-201ENST00000588074 ERCC4Q92889 916 aaPredicted RBP6.71□□□□□ -1.34
LINC01538-201ENST00000588074 C2orf49Q9BVC5 232 aaPredicted RBP6.71□□□□□ -1.34
LINC01538-201ENST00000588074 UNC93B1Q9H1C4 597 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms