RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 USP3Q9Y6I4 520 aa9.84□□□□□ -0.83
CNOT1-222ENST00000570139 ANKRD30BQ9BXX2 1392 aa9.84□□□□□ -0.83
CNOT1-222ENST00000570139 ATP10AO60312 1499 aa9.84□□□□□ -0.83
CNOT1-222ENST00000570139 EFCAB6Q5THR3 1501 aa9.83□□□□□ -0.84
CNOT1-222ENST00000570139 EIF4BP23588 611 aaKnown RBP9.83□□□□□ -0.84
CNOT1-222ENST00000570139 FAM26DQ5JW98 314 aa9.83□□□□□ -0.84
CNOT1-222ENST00000570139 ZNF654Q8IZM8 581 aa9.83□□□□□ -0.84
CNOT1-222ENST00000570139 L3MBTL2Q969R5 705 aa9.83□□□□□ -0.84
CNOT1-222ENST00000570139 DNAJC2Q99543 621 aaKnown RBP9.83□□□□□ -0.84
CNOT1-222ENST00000570139 HRH3Q9Y5N1 445 aa9.83□□□□□ -0.84
CNOT1-222ENST00000570139 TONSLQ96HA7 1378 aa9.83□□□□□ -0.84
CNOT1-222ENST00000570139 EIF1AYO14602 144 aaKnown RBP9.82□□□□□ -0.84
CNOT1-222ENST00000570139 ADH1AP07327 375 aa9.82□□□□□ -0.84
CNOT1-222ENST00000570139 KCNC4Q03721 635 aa9.82□□□□□ -0.84
CNOT1-222ENST00000570139 HIF1AQ16665 826 aa9.82□□□□□ -0.84
CNOT1-222ENST00000570139 PLA2G2CQ5R387 149 aa9.82□□□□□ -0.84
CNOT1-222ENST00000570139 CFHR5Q9BXR6 569 aa9.82□□□□□ -0.84
CNOT1-222ENST00000570139 SPHKAPQ2M3C7 1700 aa9.82□□□□□ -0.84
CNOT1-222ENST00000570139 E9PCH4 1651 aa9.81□□□□□ -0.84
CNOT1-222ENST00000570139 NEURL4Q96JN8 1562 aa9.81□□□□□ -0.84
CNOT1-222ENST00000570139 GTF2E1P29083 439 aaPredicted RBP9.81□□□□□ -0.84
CNOT1-222ENST00000570139 GTF2F1P35269 517 aaKnown RBP eCLIP9.81□□□□□ -0.84
CNOT1-222ENST00000570139 C1orf53Q5VUE5 145 aa9.81□□□□□ -0.84
CNOT1-222ENST00000570139 Q6ZNB5 142 aa9.81□□□□□ -0.84
CNOT1-222ENST00000570139 ZDHHC1Q8WTX9 485 aa9.81□□□□□ -0.84
CNOT1-222ENST00000570139 PHACTR1Q9C0D0 580 aa9.81□□□□□ -0.84
CNOT1-222ENST00000570139 INPP5FQ9Y2H2 1132 aa9.81□□□□□ -0.84
CNOT1-222ENST00000570139 HCN4Q9Y3Q4 1203 aa9.81□□□□□ -0.84
CNOT1-222ENST00000570139 TRPM2O94759 1503 aa9.81□□□□□ -0.84
CNOT1-222ENST00000570139 A0A0G2JS52 829 aa9.8□□□□□ -0.84
CNOT1-222ENST00000570139 GIPC1O14908 333 aa9.8□□□□□ -0.84
CNOT1-222ENST00000570139 CPNE3O75131 537 aaKnown RBP9.8□□□□□ -0.84
CNOT1-222ENST00000570139 RAPGEF3O95398 923 aa9.8□□□□□ -0.84
CNOT1-222ENST00000570139 DNAJA1P31689 397 aaKnown RBP9.8□□□□□ -0.84
CNOT1-222ENST00000570139 ARID5AQ03989 594 aa9.8□□□□□ -0.84
CNOT1-222ENST00000570139 ORC1Q13415 861 aa9.8□□□□□ -0.84
CNOT1-222ENST00000570139 C8orf34Q49A92 452 aa9.8□□□□□ -0.84
CNOT1-222ENST00000570139 SOGA3Q5TF21 947 aa9.8□□□□□ -0.84
CNOT1-222ENST00000570139 HS2ST1Q7LGA3 356 aa9.8□□□□□ -0.84
CNOT1-222ENST00000570139 VPS37DQ86XT2 251 aa9.8□□□□□ -0.84
CNOT1-222ENST00000570139 TREML1Q86YW5 311 aa9.8□□□□□ -0.84
CNOT1-222ENST00000570139 NUDT16Q96DE0 195 aaKnown RBP9.8□□□□□ -0.84
CNOT1-222ENST00000570139 NIFKQ9BYG3 293 aaKnown RBP9.8□□□□□ -0.84
CNOT1-222ENST00000570139 LNPKQ9C0E8 428 aa9.8□□□□□ -0.84
CNOT1-222ENST00000570139 KLK14Q9P0G3 267 aa9.8□□□□□ -0.84
CNOT1-222ENST00000570139 TMA7Q9Y2S6 64 aaKnown RBP9.8□□□□□ -0.84
CNOT1-222ENST00000570139 CEP152O94986 1710 aa9.79□□□□□ -0.84
CNOT1-222ENST00000570139 SIAH2O43255 324 aa9.79□□□□□ -0.84
CNOT1-222ENST00000570139 SH3PXD2AQ5TCZ1 1133 aa9.79□□□□□ -0.84
CNOT1-222ENST00000570139 GIMAP6Q6P9H5 292 aa9.79□□□□□ -0.84
CNOT1-222ENST00000570139 USP48Q86UV5 1035 aa9.79□□□□□ -0.84
CNOT1-222ENST00000570139 GPR152Q8TDT2 470 aa9.79□□□□□ -0.84
CNOT1-222ENST00000570139 DHX38Q92620 1227 aaKnown RBP9.79□□□□□ -0.84
CNOT1-222ENST00000570139 NLRP3Q96P20 1036 aa9.79□□□□□ -0.84
CNOT1-222ENST00000570139 DDX41Q9UJV9 622 aaKnown RBP9.79□□□□□ -0.84
CNOT1-222ENST00000570139 CAMSAP1Q5T5Y3 1602 aa9.78□□□□□ -0.84
CNOT1-222ENST00000570139 ABCC3O15438 1527 aa9.78□□□□□ -0.84
CNOT1-222ENST00000570139 KIF3BO15066 747 aa9.78□□□□□ -0.84
CNOT1-222ENST00000570139 CTSHP09668 335 aa9.78□□□□□ -0.84
CNOT1-222ENST00000570139 TNNI2P48788 182 aa9.78□□□□□ -0.84
CNOT1-222ENST00000570139 CENPCQ03188 943 aa9.78□□□□□ -0.84
CNOT1-222ENST00000570139 HIRIP3Q9BW71 556 aaPredicted RBP9.78□□□□□ -0.84
CNOT1-222ENST00000570139 FHDC1Q9C0D6 1143 aaPredicted RBP9.78□□□□□ -0.84
CNOT1-222ENST00000570139 CCDC144AA2RUR9 1427 aa9.78□□□□□ -0.84
CNOT1-222ENST00000570139 YEATS2Q9ULM3 1422 aa9.78□□□□□ -0.84
CNOT1-222ENST00000570139 NR3C2P08235 984 aa9.77□□□□□ -0.85
CNOT1-222ENST00000570139 PTPN12Q05209 780 aaKnown RBP9.77□□□□□ -0.85
CNOT1-222ENST00000570139 ZNF295-AS1Q8N0V1 137 aa9.77□□□□□ -0.85
CNOT1-222ENST00000570139 ZSCAN10Q96SZ4 725 aaPredicted RBP9.77□□□□□ -0.85
CNOT1-222ENST00000570139 PTPRTO14522 1441 aa9.76□□□□□ -0.85
CNOT1-222ENST00000570139 ARHGAP31Q2M1Z3 1444 aa9.76□□□□□ -0.85
CNOT1-222ENST00000570139 C12orf49Q9H741 205 aa9.76□□□□□ -0.85
CNOT1-222ENST00000570139 ANKRD62A6NC57 917 aa9.75□□□□□ -0.85
CNOT1-222ENST00000570139 WNT7AO00755 349 aa9.75□□□□□ -0.85
CNOT1-222ENST00000570139 ITGBL1O95965 494 aaPredicted RBP9.75□□□□□ -0.85
CNOT1-222ENST00000570139 NEUROD1Q13562 356 aa9.75□□□□□ -0.85
CNOT1-222ENST00000570139 ZNF394Q53GI3 561 aa9.75□□□□□ -0.85
CNOT1-222ENST00000570139 TMEM214Q6NUQ4 689 aaKnown RBP9.75□□□□□ -0.85
CNOT1-222ENST00000570139 ANKRD13AQ8IZ07 590 aa9.75□□□□□ -0.85
CNOT1-222ENST00000570139 RHBDD1Q8TEB9 315 aa9.75□□□□□ -0.85
CNOT1-222ENST00000570139 SIN3AQ96ST3 1273 aa9.75□□□□□ -0.85
CNOT1-222ENST00000570139 GGT7Q9UJ14 662 aa9.75□□□□□ -0.85
CNOT1-222ENST00000570139 PARP3Q9Y6F1 533 aa9.75□□□□□ -0.85
CNOT1-222ENST00000570139 CNTLNQ9NXG0 1405 aa9.74□□□□□ -0.85
CNOT1-222ENST00000570139 COL17A1Q9UMD9 1497 aaPredicted RBP9.74□□□□□ -0.85
CNOT1-222ENST00000570139 TGFBR3LH3BV60 316 aa9.74□□□□□ -0.85
CNOT1-222ENST00000570139 MEN1O00255 615 aa9.74□□□□□ -0.85
CNOT1-222ENST00000570139 PTGIRP43119 386 aa9.74□□□□□ -0.85
CNOT1-222ENST00000570139 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.74□□□□□ -0.85
CNOT1-222ENST00000570139 SRCIN1Q9C0H9 1055 aa9.74□□□□□ -0.85
CNOT1-222ENST00000570139 GGNBP2Q9H3C7 697 aa9.74□□□□□ -0.85
CNOT1-222ENST00000570139 PCDHGB7Q9Y5F8 929 aa9.74□□□□□ -0.85
CNOT1-222ENST00000570139 KIF1BO60333 1816 aa9.73□□□□□ -0.85
CNOT1-222ENST00000570139 OPLAHO14841 1288 aa9.73□□□□□ -0.85
CNOT1-222ENST00000570139 ST13P50502 369 aaKnown RBP9.73□□□□□ -0.85
CNOT1-222ENST00000570139 RBL2Q08999 1139 aa9.73□□□□□ -0.85
CNOT1-222ENST00000570139 CCDC144BQ3MJ40 725 aa9.73□□□□□ -0.85
CNOT1-222ENST00000570139 GNASQ5JWF2 1037 aa9.73□□□□□ -0.85
CNOT1-222ENST00000570139 SNX29Q8TEQ0 813 aa9.73□□□□□ -0.85
CNOT1-222ENST00000570139 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms