RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 IFIT1P09914 478 aaKnown RBP14.2□□□□□ -0.14
BBS4-213ENST00000567279 ADRA2BP18089 450 aa14.2□□□□□ -0.14
BBS4-213ENST00000567279 KIAA1211Q6ZU35 1233 aa14.2□□□□□ -0.14
BBS4-213ENST00000567279 DDX46Q7L014 1031 aaKnown RBP14.2□□□□□ -0.14
BBS4-213ENST00000567279 NBPF5PQ86XG9 351 aaPredicted RBP14.2□□□□□ -0.14
BBS4-213ENST00000567279 SNX21Q969T3 373 aa14.2□□□□□ -0.14
BBS4-213ENST00000567279 MPHOSPH8Q99549 860 aa14.2□□□□□ -0.14
BBS4-213ENST00000567279 COL4A1P02462 1669 aa14.2□□□□□ -0.14
BBS4-213ENST00000567279 RFX7Q2KHR2 1363 aa14.19□□□□□ -0.14
BBS4-213ENST00000567279 IGHMBP2P38935 993 aaKnown RBP14.19□□□□□ -0.14
BBS4-213ENST00000567279 CCDC158Q5M9N0 1113 aa14.19□□□□□ -0.14
BBS4-213ENST00000567279 VGLL2Q8N8G2 317 aa14.19□□□□□ -0.14
BBS4-213ENST00000567279 FAM227BQ96M60 508 aa14.19□□□□□ -0.14
BBS4-213ENST00000567279 LSG1Q9H089 658 aaKnown RBP14.19□□□□□ -0.14
BBS4-213ENST00000567279 A0A1B0GUL6 1792 aa14.19□□□□□ -0.14
BBS4-213ENST00000567279 MROH5Q6ZUA9 1318 aa14.19□□□□□ -0.14
BBS4-213ENST00000567279 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.18□□□□□ -0.14
BBS4-213ENST00000567279 GOLIM4O00461 696 aa14.18□□□□□ -0.14
BBS4-213ENST00000567279 EPB41L2O43491 1005 aaKnown RBP14.18□□□□□ -0.14
BBS4-213ENST00000567279 C3orf67Q6ZVT6 689 aa14.18□□□□□ -0.14
BBS4-213ENST00000567279 PAG1Q9NWQ8 432 aa14.18□□□□□ -0.14
BBS4-213ENST00000567279 TAF1P21675 1872 aa14.18□□□□□ -0.14
BBS4-213ENST00000567279 TNS1Q9HBL0 1735 aaKnown RBP14.18□□□□□ -0.14
BBS4-213ENST00000567279 A0A0D9SFI3 127 aa14.18□□□□□ -0.14
BBS4-213ENST00000567279 CD2BP2O95400 341 aaKnown RBP14.18□□□□□ -0.14
BBS4-213ENST00000567279 TXNRD1Q16881 649 aa14.18□□□□□ -0.14
BBS4-213ENST00000567279 SPRYD3Q8NCJ5 442 aa14.18□□□□□ -0.14
BBS4-213ENST00000567279 SLKQ9H2G2 1235 aaPredicted RBP14.18□□□□□ -0.14
BBS4-213ENST00000567279 PALD1Q9ULE6 856 aa14.18□□□□□ -0.14
BBS4-213ENST00000567279 EP400Q96L91 3159 aa14.18□□□□□ -0.14
BBS4-213ENST00000567279 TNRC6CQ9HCJ0 1690 aaKnown RBP14.18□□□□□ -0.14
BBS4-213ENST00000567279 PDE8BO95263 885 aa14.17□□□□□ -0.14
BBS4-213ENST00000567279 KBTBD3Q8NAB2 608 aa14.17□□□□□ -0.14
BBS4-213ENST00000567279 HELBQ8NG08 1087 aaPredicted RBP14.17□□□□□ -0.14
BBS4-213ENST00000567279 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.17□□□□□ -0.14
BBS4-213ENST00000567279 CDC5LQ99459 802 aaKnown RBP14.17□□□□□ -0.14
BBS4-213ENST00000567279 CARMIL3Q8ND23 1372 aa14.17□□□□□ -0.14
BBS4-213ENST00000567279 NPHP1O15259 732 aa14.16□□□□□ -0.14
BBS4-213ENST00000567279 SSFA2P28290 1259 aa14.16□□□□□ -0.14
BBS4-213ENST00000567279 PUM3Q15397 648 aaKnown RBP14.16□□□□□ -0.14
BBS4-213ENST00000567279 CCDC24Q8N4L8 307 aa14.16□□□□□ -0.14
BBS4-213ENST00000567279 MED23Q9ULK4 1368 aa14.16□□□□□ -0.14
BBS4-213ENST00000567279 CCDC171Q6TFL3 1326 aa14.16□□□□□ -0.14
BBS4-213ENST00000567279 HSPA4P34932 840 aa14.16□□□□□ -0.14
BBS4-213ENST00000567279 ANAPC15P60006 121 aa14.16□□□□□ -0.14
BBS4-213ENST00000567279 SF3B3Q15393 1217 aaKnown RBP14.16□□□□□ -0.14
BBS4-213ENST00000567279 SLC10A5Q5PT55 438 aa14.16□□□□□ -0.14
BBS4-213ENST00000567279 TPTE2Q6XPS3 522 aa14.16□□□□□ -0.14
BBS4-213ENST00000567279 MYH7P12883 1935 aa14.15□□□□□ -0.14
BBS4-213ENST00000567279 K7ELQ4 463 aaPredicted RBP14.15□□□□□ -0.14
BBS4-213ENST00000567279 APBA3O96018 575 aa14.15□□□□□ -0.14
BBS4-213ENST00000567279 SLC5A1P13866 664 aa14.15□□□□□ -0.14
BBS4-213ENST00000567279 PTH1RQ03431 593 aa14.15□□□□□ -0.14
BBS4-213ENST00000567279 NFIXQ14938 502 aa14.15□□□□□ -0.14
BBS4-213ENST00000567279 ANKRD18AQ8IVF6 992 aa14.15□□□□□ -0.14
BBS4-213ENST00000567279 SNRKQ9NRH2 765 aa14.15□□□□□ -0.14
BBS4-213ENST00000567279 AKAP11Q9UKA4 1901 aa14.15□□□□□ -0.14
BBS4-213ENST00000567279 ST18O60284 1047 aa14.14□□□□□ -0.15
BBS4-213ENST00000567279 TAF5LO75529 589 aa14.14□□□□□ -0.15
BBS4-213ENST00000567279 FKBP4Q02790 459 aaKnown RBP eCLIP14.14□□□□□ -0.15
BBS4-213ENST00000567279 SCARF1Q14162 830 aa14.14□□□□□ -0.15
BBS4-213ENST00000567279 PROM2Q8N271 834 aa14.14□□□□□ -0.15
BBS4-213ENST00000567279 LPIN2Q92539 896 aa14.14□□□□□ -0.15
BBS4-213ENST00000567279 NLRP3Q96P20 1036 aa14.14□□□□□ -0.15
BBS4-213ENST00000567279 ANP32EQ9BTT0 268 aa14.14□□□□□ -0.15
BBS4-213ENST00000567279 CHGBP05060 677 aa14.14□□□□□ -0.15
BBS4-213ENST00000567279 FGFR2P21802 821 aa14.14□□□□□ -0.15
BBS4-213ENST00000567279 ZNF589Q86UQ0 364 aaPredicted RBP14.14□□□□□ -0.15
BBS4-213ENST00000567279 RGPD3A6NKT7 1758 aaPredicted RBP14.13□□□□□ -0.15
BBS4-213ENST00000567279 RGPD4Q7Z3J3 1758 aa14.13□□□□□ -0.15
BBS4-213ENST00000567279 GYS1P13807 737 aa14.13□□□□□ -0.15
BBS4-213ENST00000567279 ZAP70P43403 619 aa14.13□□□□□ -0.15
BBS4-213ENST00000567279 KCNJ4P48050 445 aa14.13□□□□□ -0.15
BBS4-213ENST00000567279 CHRNDQ07001 517 aa14.13□□□□□ -0.15
BBS4-213ENST00000567279 POTEAQ6S8J7 498 aa14.13□□□□□ -0.15
BBS4-213ENST00000567279 CNBD1Q8NA66 436 aa14.13□□□□□ -0.15
BBS4-213ENST00000567279 ANTXR1Q9H6X2 564 aa14.13□□□□□ -0.15
BBS4-213ENST00000567279 RGS17Q9UGC6 210 aaPredicted RBP14.13□□□□□ -0.15
BBS4-213ENST00000567279 SNAP23O00161 211 aa14.12□□□□□ -0.15
BBS4-213ENST00000567279 PLSCR1O15162 318 aa14.12□□□□□ -0.15
BBS4-213ENST00000567279 HMGB2P26583 209 aaKnown RBP14.12□□□□□ -0.15
BBS4-213ENST00000567279 MCAMP43121 646 aa14.12□□□□□ -0.15
BBS4-213ENST00000567279 PHKA1P46020 1223 aa14.12□□□□□ -0.15
BBS4-213ENST00000567279 PI16Q6UXB8 463 aa14.12□□□□□ -0.15
BBS4-213ENST00000567279 SNX14Q9Y5W7 946 aa14.12□□□□□ -0.15
BBS4-213ENST00000567279 NEK4P51957 841 aa14.12□□□□□ -0.15
BBS4-213ENST00000567279 ZNF827Q17R98 1081 aa14.12□□□□□ -0.15
BBS4-213ENST00000567279 CCDC102BQ68D86 513 aa14.12□□□□□ -0.15
BBS4-213ENST00000567279 PRPF40BQ6NWY9 871 aaKnown RBP14.12□□□□□ -0.15
BBS4-213ENST00000567279 CCDC129Q6ZRS4 1044 aa14.12□□□□□ -0.15
BBS4-213ENST00000567279 FBXO41Q8TF61 875 aa14.12□□□□□ -0.15
BBS4-213ENST00000567279 CELF1Q92879 486 aaKnown RBP14.12□□□□□ -0.15
BBS4-213ENST00000567279 SEC62Q99442 399 aaKnown RBP14.12□□□□□ -0.15
BBS4-213ENST00000567279 RBM8AQ9Y5S9 174 aaKnown RBP14.12□□□□□ -0.15
BBS4-213ENST00000567279 HSP90AA1P07900 732 aaKnown RBP14.11□□□□□ -0.15
BBS4-213ENST00000567279 UQCRFS1P1P0C7P4 283 aa14.11□□□□□ -0.15
BBS4-213ENST00000567279 IL17RAQ96F46 866 aa14.11□□□□□ -0.15
BBS4-213ENST00000567279 ZNF512BQ96KM6 892 aaPredicted RBP14.11□□□□□ -0.15
BBS4-213ENST00000567279 RNF113AO15541 343 aaKnown RBP14.1□□□□□ -0.15
BBS4-213ENST00000567279 ARID4AP29374 1257 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms