RNA–Protein interactions for RNA: ENST00000567269.5

CDH16-206, Transcript of cadherin 16, humanhuman

TSL 2

Gene CDH16, Length 3,539 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-206ENST00000567269 GAS2L3Q86XJ1 694 aa14.4□□□□□ -0.1
CDH16-206ENST00000567269 ZSCAN31Q96LW9 406 aaPredicted RBP14.4□□□□□ -0.1
CDH16-206ENST00000567269 KCNQ2O43526 872 aa14.4□□□□□ -0.1
CDH16-206ENST00000567269 GTF2E1P29083 439 aaPredicted RBP14.4□□□□□ -0.1
CDH16-206ENST00000567269 NEK1Q96PY6 1258 aa14.4□□□□□ -0.1
CDH16-206ENST00000567269 TPCN1Q9ULQ1 816 aa14.4□□□□□ -0.1
CDH16-206ENST00000567269 LOC102724428A0A0B4J2F2 783 aa14.4□□□□□ -0.1
CDH16-206ENST00000567269 PPFIA3O75145 1194 aa14.4□□□□□ -0.1
CDH16-206ENST00000567269 FOSBP53539 338 aa14.4□□□□□ -0.1
CDH16-206ENST00000567269 SIK1P57059 783 aa14.4□□□□□ -0.1
CDH16-206ENST00000567269 TTLL11Q8NHH1 800 aa14.4□□□□□ -0.1
CDH16-206ENST00000567269 MPHOSPH8Q99549 860 aa14.4□□□□□ -0.1
CDH16-206ENST00000567269 CRKLP46109 303 aaKnown RBP14.39□□□□□ -0.11
CDH16-206ENST00000567269 CTSWP56202 376 aa14.39□□□□□ -0.11
CDH16-206ENST00000567269 HSP90AA2PQ14568 343 aaPredicted RBP14.39□□□□□ -0.11
CDH16-206ENST00000567269 LARP1BQ659C4 914 aaKnown RBP14.39□□□□□ -0.11
CDH16-206ENST00000567269 MARCH10Q8NA82 808 aaPredicted RBP14.39□□□□□ -0.11
CDH16-206ENST00000567269 TM6SF1Q9BZW5 370 aa14.39□□□□□ -0.11
CDH16-206ENST00000567269 SH2B1Q9NRF2 756 aaPredicted RBP14.39□□□□□ -0.11
CDH16-206ENST00000567269 U3KPZ7 1027 aaPredicted RBP14.39□□□□□ -0.11
CDH16-206ENST00000567269 BCL9O00512 1426 aa14.39□□□□□ -0.11
CDH16-206ENST00000567269 IDH1O75874 414 aaKnown RBP14.39□□□□□ -0.11
CDH16-206ENST00000567269 TRIM28Q13263 835 aaKnown RBP14.39□□□□□ -0.11
CDH16-206ENST00000567269 NAP1L5Q96NT1 182 aaPredicted RBP14.39□□□□□ -0.11
CDH16-206ENST00000567269 CCDC87Q9NVE4 849 aa14.39□□□□□ -0.11
CDH16-206ENST00000567269 HMG20BQ9P0W2 317 aa14.39□□□□□ -0.11
CDH16-206ENST00000567269 SPATA31A1Q5TZJ5 1347 aa14.39□□□□□ -0.11
CDH16-206ENST00000567269 APPP05067 770 aa14.38□□□□□ -0.11
CDH16-206ENST00000567269 HAND2P61296 217 aa14.38□□□□□ -0.11
CDH16-206ENST00000567269 CDCA7Q9BWT1 371 aaPredicted RBP14.38□□□□□ -0.11
CDH16-206ENST00000567269 CIAO1O76071 339 aa14.38□□□□□ -0.11
CDH16-206ENST00000567269 IL6STP40189 918 aaPredicted RBP14.38□□□□□ -0.11
CDH16-206ENST00000567269 KRT32Q14532 448 aa14.38□□□□□ -0.11
CDH16-206ENST00000567269 CHST3Q7LGC8 479 aa14.38□□□□□ -0.11
CDH16-206ENST00000567269 NIP7Q9Y221 180 aaKnown RBP eCLIP14.38□□□□□ -0.11
CDH16-206ENST00000567269 TNS2Q63HR2 1409 aa14.38□□□□□ -0.11
CDH16-206ENST00000567269 RPS6KB1P23443 525 aa14.38□□□□□ -0.11
CDH16-206ENST00000567269 ZAP70P43403 619 aa14.38□□□□□ -0.11
CDH16-206ENST00000567269 ANKRD1Q15327 319 aa14.38□□□□□ -0.11
CDH16-206ENST00000567269 FAM182BQ5T319 152 aa14.38□□□□□ -0.11
CDH16-206ENST00000567269 NPHP1O15259 732 aa14.37□□□□□ -0.11
CDH16-206ENST00000567269 CYP21A2P08686 494 aa14.37□□□□□ -0.11
CDH16-206ENST00000567269 LRRFIP1Q32MZ4 808 aaKnown RBP14.37□□□□□ -0.11
CDH16-206ENST00000567269 CLEC17AQ6ZS10 378 aa14.37□□□□□ -0.11
CDH16-206ENST00000567269 ARFGEF2Q9Y6D5 1785 aa14.37□□□□□ -0.11
CDH16-206ENST00000567269 SNAP23O00161 211 aa14.37□□□□□ -0.11
CDH16-206ENST00000567269 RNF113AO15541 343 aaKnown RBP14.37□□□□□ -0.11
CDH16-206ENST00000567269 PDE8AO60658 829 aa14.37□□□□□ -0.11
CDH16-206ENST00000567269 ZSCAN22P10073 491 aaPredicted RBP14.37□□□□□ -0.11
CDH16-206ENST00000567269 SCARF1Q14162 830 aa14.37□□□□□ -0.11
CDH16-206ENST00000567269 BRF1Q92994 677 aa14.37□□□□□ -0.11
CDH16-206ENST00000567269 DDX11Q96FC9 970 aa14.37□□□□□ -0.11
CDH16-206ENST00000567269 GPR108Q9NPR9 543 aa14.37□□□□□ -0.11
CDH16-206ENST00000567269 CNPY2Q9Y2B0 182 aa14.37□□□□□ -0.11
CDH16-206ENST00000567269 ZNF609O15014 1411 aa14.37□□□□□ -0.11
CDH16-206ENST00000567269 SYCE3A1L190 88 aa14.37□□□□□ -0.11
CDH16-206ENST00000567269 ZSCAN23Q3MJ62 389 aa14.37□□□□□ -0.11
CDH16-206ENST00000567269 Q6ZUG5 572 aa14.37□□□□□ -0.11
CDH16-206ENST00000567269 GPT2Q8TD30 523 aa14.37□□□□□ -0.11
CDH16-206ENST00000567269 TRIM44Q96DX7 344 aaPredicted RBP14.37□□□□□ -0.11
CDH16-206ENST00000567269 NSFL1CQ9UNZ2 370 aaKnown RBP14.37□□□□□ -0.11
CDH16-206ENST00000567269 FSD2A1L4K1 749 aa14.36□□□□□ -0.11
CDH16-206ENST00000567269 ATP6V1DQ9Y5K8 247 aa14.36□□□□□ -0.11
CDH16-206ENST00000567269 COL15A1P39059 1388 aa14.36□□□□□ -0.11
CDH16-206ENST00000567269 MED23Q9ULK4 1368 aa14.36□□□□□ -0.11
CDH16-206ENST00000567269 SMIM5Q71RC9 77 aa14.36□□□□□ -0.11
CDH16-206ENST00000567269 TTLL5Q6EMB2 1281 aa14.36□□□□□ -0.11
CDH16-206ENST00000567269 USP48Q86UV5 1035 aa14.36□□□□□ -0.11
CDH16-206ENST00000567269 SH3TC1Q8TE82 1336 aa14.35□□□□□ -0.11
CDH16-206ENST00000567269 RNF214Q8ND24 703 aa14.35□□□□□ -0.11
CDH16-206ENST00000567269 ROBO1Q9Y6N7 1651 aa14.35□□□□□ -0.11
CDH16-206ENST00000567269 MBD3O95983 291 aa14.35□□□□□ -0.11
CDH16-206ENST00000567269 NASPP49321 788 aaPredicted RBP14.35□□□□□ -0.11
CDH16-206ENST00000567269 SUSD4Q5VX71 490 aa14.35□□□□□ -0.11
CDH16-206ENST00000567269 UTP14AQ9BVJ6 771 aaKnown RBP14.35□□□□□ -0.11
CDH16-206ENST00000567269 GADD45BO75293 160 aaPredicted RBP14.35□□□□□ -0.11
CDH16-206ENST00000567269 FAM184AQ8NB25 1140 aa14.35□□□□□ -0.11
CDH16-206ENST00000567269 SEC31BQ9NQW1 1179 aa14.35□□□□□ -0.11
CDH16-206ENST00000567269 HELLSQ9NRZ9 838 aa14.35□□□□□ -0.11
CDH16-206ENST00000567269 UBN2Q6ZU65 1347 aa14.34□□□□□ -0.11
CDH16-206ENST00000567269 CSF1RP07333 972 aa14.34□□□□□ -0.11
CDH16-206ENST00000567269 HSPD1P10809 573 aaKnown RBP14.34□□□□□ -0.11
CDH16-206ENST00000567269 ITPK1Q13572 414 aa14.34□□□□□ -0.11
CDH16-206ENST00000567269 OSBP2Q969R2 916 aa14.34□□□□□ -0.11
CDH16-206ENST00000567269 MAST3O60307 1309 aa14.34□□□□□ -0.11
CDH16-206ENST00000567269 A0A0G2JLW4 131 aa14.34□□□□□ -0.11
CDH16-206ENST00000567269 H3BQV1 296 aa14.34□□□□□ -0.11
CDH16-206ENST00000567269 F13A1P00488 732 aa14.34□□□□□ -0.11
CDH16-206ENST00000567269 CCT2P78371 535 aaKnown RBP14.34□□□□□ -0.11
CDH16-206ENST00000567269 SLC9C2Q5TAH2 1124 aa14.34□□□□□ -0.11
CDH16-206ENST00000567269 IFFO2Q5TF58 517 aa14.34□□□□□ -0.11
CDH16-206ENST00000567269 FAM173BQ6P4H8 233 aa14.34□□□□□ -0.11
CDH16-206ENST00000567269 DNM1Q05193 864 aaKnown RBP14.33□□□□□ -0.11
CDH16-206ENST00000567269 ZMYM1Q5SVZ6 1142 aa14.33□□□□□ -0.11
CDH16-206ENST00000567269 IL17RAQ96F46 866 aa14.33□□□□□ -0.11
CDH16-206ENST00000567269 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.33□□□□□ -0.11
CDH16-206ENST00000567269 TMEM63CQ9P1W3 806 aa14.33□□□□□ -0.11
CDH16-206ENST00000567269 IQSEC3Q9UPP2 1182 aaPredicted RBP14.33□□□□□ -0.11
CDH16-206ENST00000567269 THRAP3Q9Y2W1 955 aaKnown RBP14.33□□□□□ -0.11
CDH16-206ENST00000567269 ERVV-1B6SEH8 477 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 1050.3 ms