RNA–Protein interactions for RNA: ENST00000566416.1

VAC14-207, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 3

Gene VAC14, Length 780 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-207ENST00000566416 TK2O00142 265 aa11.87□□□□□ -0.51
VAC14-207ENST00000566416 CFHP08603 1231 aa11.87□□□□□ -0.51
VAC14-207ENST00000566416 HOXB7P09629 217 aa11.87□□□□□ -0.51
VAC14-207ENST00000566416 FUT2Q10981 343 aa11.87□□□□□ -0.51
VAC14-207ENST00000566416 MSL1Q68DK7 614 aa11.87□□□□□ -0.51
VAC14-207ENST00000566416 MCM10Q7L590 875 aa11.87□□□□□ -0.51
VAC14-207ENST00000566416 IL17REQ8NFR9 667 aa11.87□□□□□ -0.51
VAC14-207ENST00000566416 TSR2Q969E8 191 aaKnown RBP11.87□□□□□ -0.51
VAC14-207ENST00000566416 HS3ST6Q96QI5 342 aa11.87□□□□□ -0.51
VAC14-207ENST00000566416 SYT17Q9BSW7 474 aa11.87□□□□□ -0.51
VAC14-207ENST00000566416 SLC52A2Q9HAB3 445 aa11.87□□□□□ -0.51
VAC14-207ENST00000566416 SSFA2P28290 1259 aa11.86□□□□□ -0.51
VAC14-207ENST00000566416 TEFQ10587 303 aa11.86□□□□□ -0.51
VAC14-207ENST00000566416 ARHGAP45Q92619 1136 aa11.86□□□□□ -0.51
VAC14-207ENST00000566416 ZFRQ96KR1 1074 aaKnown RBP11.86□□□□□ -0.51
VAC14-207ENST00000566416 GDPD2Q9HCC8 539 aa11.86□□□□□ -0.51
VAC14-207ENST00000566416 PPP4R2Q9NY27 417 aa11.86□□□□□ -0.51
VAC14-207ENST00000566416 RTCBQ9Y3I0 505 aaKnown RBP11.86□□□□□ -0.51
VAC14-207ENST00000566416 IPO8O15397 1037 aaKnown RBP11.85□□□□□ -0.51
VAC14-207ENST00000566416 VAMP4O75379 141 aa11.85□□□□□ -0.51
VAC14-207ENST00000566416 DCTN1Q14203 1278 aa11.85□□□□□ -0.51
VAC14-207ENST00000566416 TWISTNBQ3B726 338 aaPredicted RBP11.85□□□□□ -0.51
VAC14-207ENST00000566416 TRAPPC3LQ5T215 181 aa11.85□□□□□ -0.51
VAC14-207ENST00000566416 SMIM5Q71RC9 77 aa11.85□□□□□ -0.51
VAC14-207ENST00000566416 SLC4A9Q96Q91 983 aa11.85□□□□□ -0.51
VAC14-207ENST00000566416 THUMPD2Q9BTF0 503 aaKnown RBP11.85□□□□□ -0.51
VAC14-207ENST00000566416 TSPYL4Q9UJ04 414 aa11.85□□□□□ -0.51
VAC14-207ENST00000566416 SLC39A6Q13433 755 aa11.84□□□□□ -0.51
VAC14-207ENST00000566416 MTMR2Q13614 643 aa11.84□□□□□ -0.51
VAC14-207ENST00000566416 TTC5Q8N0Z6 440 aa11.84□□□□□ -0.51
VAC14-207ENST00000566416 LAS1LQ9Y4W2 734 aaKnown RBP11.84□□□□□ -0.51
VAC14-207ENST00000566416 N4BP2Q86UW6 1770 aaPredicted RBP11.84□□□□□ -0.51
VAC14-207ENST00000566416 RNF40O75150 1001 aa11.83□□□□□ -0.52
VAC14-207ENST00000566416 RFC4P35249 363 aa11.83□□□□□ -0.52
VAC14-207ENST00000566416 GRIPAP1Q4V328 841 aa11.83□□□□□ -0.52
VAC14-207ENST00000566416 RC3H1Q5TC82 1133 aaKnown RBP11.83□□□□□ -0.52
VAC14-207ENST00000566416 AFDNP55196 1824 aaKnown RBP11.83□□□□□ -0.52
VAC14-207ENST00000566416 KIF13BQ9NQT8 1826 aa11.83□□□□□ -0.52
VAC14-207ENST00000566416 CNTNAP4Q9C0A0 1308 aa11.83□□□□□ -0.52
VAC14-207ENST00000566416 RPS6KA4O75676 772 aa11.82□□□□□ -0.52
VAC14-207ENST00000566416 ZKSCAN2Q63HK3 967 aa11.82□□□□□ -0.52
VAC14-207ENST00000566416 AMIGO3Q86WK7 504 aa11.82□□□□□ -0.52
VAC14-207ENST00000566416 MRPL50Q8N5N7 158 aaKnown RBP11.82□□□□□ -0.52
VAC14-207ENST00000566416 FAM163AQ96GL9 167 aaPredicted RBP11.82□□□□□ -0.52
VAC14-207ENST00000566416 SMC4Q9NTJ3 1288 aa11.82□□□□□ -0.52
VAC14-207ENST00000566416 TBC1D2BQ9UPU7 963 aa11.82□□□□□ -0.52
VAC14-207ENST00000566416 KCPQ6ZWJ8 1503 aa11.81□□□□□ -0.52
VAC14-207ENST00000566416 BCAR3O75815 825 aa11.81□□□□□ -0.52
VAC14-207ENST00000566416 CRKLP46109 303 aaKnown RBP11.81□□□□□ -0.52
VAC14-207ENST00000566416 LSM11P83369 360 aaKnown RBP eCLIP11.81□□□□□ -0.52
VAC14-207ENST00000566416 GPR162Q16538 588 aa11.81□□□□□ -0.52
VAC14-207ENST00000566416 ADGRD1Q6QNK2 874 aa11.81□□□□□ -0.52
VAC14-207ENST00000566416 DNAJC10Q8IXB1 793 aa11.81□□□□□ -0.52
VAC14-207ENST00000566416 SSH1Q8WYL5 1049 aa11.81□□□□□ -0.52
VAC14-207ENST00000566416 CHMP4BQ9H444 224 aaKnown RBP11.81□□□□□ -0.52
VAC14-207ENST00000566416 ZNF330Q9Y3S2 320 aaPredicted RBP11.81□□□□□ -0.52
VAC14-207ENST00000566416 UTRNP46939 3433 aa11.81□□□□□ -0.52
VAC14-207ENST00000566416 HEG1Q9ULI3 1381 aa11.8□□□□□ -0.52
VAC14-207ENST00000566416 CANXP27824 592 aaKnown RBP11.8□□□□□ -0.52
VAC14-207ENST00000566416 ATF7IPQ6VMQ6 1270 aa11.8□□□□□ -0.52
VAC14-207ENST00000566416 C8orf58Q8NAV2 365 aa11.8□□□□□ -0.52
VAC14-207ENST00000566416 PTPRCP08575 1304 aa11.8□□□□□ -0.52
VAC14-207ENST00000566416 BTBD11A6QL63 1104 aa11.79□□□□□ -0.52
VAC14-207ENST00000566416 CFAP99D6REC4 459 aa11.79□□□□□ -0.52
VAC14-207ENST00000566416 ABL2P42684 1182 aa11.79□□□□□ -0.52
VAC14-207ENST00000566416 CTDSPL2Q05D32 466 aa11.79□□□□□ -0.52
VAC14-207ENST00000566416 KMT5BQ4FZB7 885 aa11.79□□□□□ -0.52
VAC14-207ENST00000566416 CCDC30Q5VVM6 783 aa11.79□□□□□ -0.52
VAC14-207ENST00000566416 NLGN1Q8N2Q7 840 aa11.79□□□□□ -0.52
VAC14-207ENST00000566416 TSPYL6Q8N831 410 aa11.79□□□□□ -0.52
VAC14-207ENST00000566416 PRM3Q9NNZ6 103 aa11.79□□□□□ -0.52
VAC14-207ENST00000566416 PLSCR2Q9NRY7 297 aa11.79□□□□□ -0.52
VAC14-207ENST00000566416 CCDC87Q9NVE4 849 aa11.79□□□□□ -0.52
VAC14-207ENST00000566416 LAMB4A4D0S4 1761 aa11.79□□□□□ -0.52
VAC14-207ENST00000566416 C6orf229H3BNL8 230 aa11.78□□□□□ -0.52
VAC14-207ENST00000566416 HRO43593 1189 aa11.78□□□□□ -0.52
VAC14-207ENST00000566416 EIF4A1P60842 406 aaKnown RBP11.78□□□□□ -0.52
VAC14-207ENST00000566416 LCE2DQ5TA82 110 aaPredicted RBP11.78□□□□□ -0.52
VAC14-207ENST00000566416 ZNF790Q6PG37 636 aa11.78□□□□□ -0.52
VAC14-207ENST00000566416 NLGN2Q8NFZ4 835 aa11.78□□□□□ -0.52
VAC14-207ENST00000566416 LRCH3Q96II8 777 aa11.78□□□□□ -0.52
VAC14-207ENST00000566416 API5Q9BZZ5 524 aaKnown RBP11.78□□□□□ -0.52
VAC14-207ENST00000566416 HMX1Q9NP08 348 aaPredicted RBP11.78□□□□□ -0.52
VAC14-207ENST00000566416 BRCA1P38398 1863 aaKnown RBP11.78□□□□□ -0.52
VAC14-207ENST00000566416 CACNA1SQ13698 1873 aa11.78□□□□□ -0.52
VAC14-207ENST00000566416 CEP350Q5VT06 3117 aa11.77□□□□□ -0.53
VAC14-207ENST00000566416 ZPR1O75312 459 aa11.77□□□□□ -0.53
VAC14-207ENST00000566416 STARD3NLO95772 234 aa11.77□□□□□ -0.53
VAC14-207ENST00000566416 MMP10P09238 476 aa11.77□□□□□ -0.53
VAC14-207ENST00000566416 CYP19A1P11511 503 aaPredicted RBP11.77□□□□□ -0.53
VAC14-207ENST00000566416 NPM2Q86SE8 214 aaKnown RBP11.77□□□□□ -0.53
VAC14-207ENST00000566416 DZIP1LQ8IYY4 767 aaKnown RBP11.77□□□□□ -0.53
VAC14-207ENST00000566416 HELBQ8NG08 1087 aaPredicted RBP11.77□□□□□ -0.53
VAC14-207ENST00000566416 FMNL2Q96PY5 1086 aa11.77□□□□□ -0.53
VAC14-207ENST00000566416 STK31Q9BXU1 1019 aa11.77□□□□□ -0.53
VAC14-207ENST00000566416 TEX13AQ9BXU3 409 aaPredicted RBP11.77□□□□□ -0.53
VAC14-207ENST00000566416 CD2APQ9Y5K6 639 aa11.77□□□□□ -0.53
VAC14-207ENST00000566416 CCDC88AQ3V6T2 1871 aa11.76□□□□□ -0.53
VAC14-207ENST00000566416 ACTN4O43707 911 aaKnown RBP11.76□□□□□ -0.53
VAC14-207ENST00000566416 PLIN1O60240 522 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms