RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 CANXP27824 592 aaKnown RBP7.1□□□□□ -1.27
LINC01963-201ENST00000562038 FKBP1AP62942 108 aaKnown RBP7.1□□□□□ -1.27
LINC01963-201ENST00000562038 HNRNPUQ00839 825 aaKnown RBP eCLIP7.1□□□□□ -1.27
LINC01963-201ENST00000562038 FOXD4L5Q5VV16 416 aaPredicted RBP7.1□□□□□ -1.27
LINC01963-201ENST00000562038 ERICH6BQ5W0A0 696 aa7.1□□□□□ -1.27
LINC01963-201ENST00000562038 TTLL7Q6ZT98 887 aa7.1□□□□□ -1.27
LINC01963-201ENST00000562038 FOXD4L4Q8WXT5 416 aaPredicted RBP7.1□□□□□ -1.27
LINC01963-201ENST00000562038 RBM17Q96I25 401 aaKnown RBP7.1□□□□□ -1.27
LINC01963-201ENST00000562038 COL1A1P02452 1464 aaPredicted RBP7.1□□□□□ -1.27
LINC01963-201ENST00000562038 SLC4A2P04920 1241 aa7.1□□□□□ -1.27
LINC01963-201ENST00000562038 IGKV5-2P06315 115 aa7.1□□□□□ -1.27
LINC01963-201ENST00000562038 GNAI3P08754 354 aa7.1□□□□□ -1.27
LINC01963-201ENST00000562038 SRCIN1Q9C0H9 1055 aa7.1□□□□□ -1.27
LINC01963-201ENST00000562038 CWC22Q9HCG8 908 aaKnown RBP7.1□□□□□ -1.27
LINC01963-201ENST00000562038 MIS18AQ9NYP9 233 aa7.1□□□□□ -1.27
LINC01963-201ENST00000562038 NIP7Q9Y221 180 aaKnown RBP eCLIP7.1□□□□□ -1.27
LINC01963-201ENST00000562038 LMNB1P20700 586 aa7.09□□□□□ -1.27
LINC01963-201ENST00000562038 HLFQ16534 295 aa7.09□□□□□ -1.27
LINC01963-201ENST00000562038 SP8Q8IXZ3 490 aa7.09□□□□□ -1.27
LINC01963-201ENST00000562038 RTKN2Q8IZC4 609 aa7.09□□□□□ -1.27
LINC01963-201ENST00000562038 MAP3K2Q9Y2U5 619 aa7.09□□□□□ -1.27
LINC01963-201ENST00000562038 GRM8O00222 908 aa7.09□□□□□ -1.27
LINC01963-201ENST00000562038 GRAPQ13588 217 aa7.09□□□□□ -1.27
LINC01963-201ENST00000562038 NEUROD2Q15784 382 aa7.09□□□□□ -1.27
LINC01963-201ENST00000562038 CCDC152Q4G0S7 254 aa7.09□□□□□ -1.27
LINC01963-201ENST00000562038 SUSD4Q5VX71 490 aa7.09□□□□□ -1.27
LINC01963-201ENST00000562038 RIC3Q7Z5B4 369 aa7.09□□□□□ -1.27
LINC01963-201ENST00000562038 NBPF5PQ86XG9 351 aaPredicted RBP7.09□□□□□ -1.27
LINC01963-201ENST00000562038 GRAPLQ8TC17 118 aaPredicted RBP7.09□□□□□ -1.27
LINC01963-201ENST00000562038 ZNF526Q8TF50 670 aaPredicted RBP7.09□□□□□ -1.27
LINC01963-201ENST00000562038 CDC5LQ99459 802 aaKnown RBP7.09□□□□□ -1.27
LINC01963-201ENST00000562038 SRP68Q9UHB9 627 aaKnown RBP7.09□□□□□ -1.27
LINC01963-201ENST00000562038 SALL2Q9Y467 1007 aaPredicted RBP7.09□□□□□ -1.27
LINC01963-201ENST00000562038 FOCADQ5VW36 1801 aa7.09□□□□□ -1.28
LINC01963-201ENST00000562038 MED23Q9ULK4 1368 aa7.09□□□□□ -1.28
LINC01963-201ENST00000562038 H0YIN7 160 aa7.08□□□□□ -1.28
LINC01963-201ENST00000562038 GPR108Q9NPR9 543 aa7.08□□□□□ -1.28
LINC01963-201ENST00000562038 PIM2Q9P1W9 311 aa7.08□□□□□ -1.28
LINC01963-201ENST00000562038 CTSWP56202 376 aa7.08□□□□□ -1.28
LINC01963-201ENST00000562038 SMC4Q9NTJ3 1288 aa7.08□□□□□ -1.28
LINC01963-201ENST00000562038 TLL2Q9Y6L7 1015 aa7.08□□□□□ -1.28
LINC01963-201ENST00000562038 IRS2Q9Y4H2 1338 aa7.08□□□□□ -1.28
LINC01963-201ENST00000562038 NLRP3Q96P20 1036 aa7.07□□□□□ -1.28
LINC01963-201ENST00000562038 ATP6V0A2Q9Y487 856 aa7.07□□□□□ -1.28
LINC01963-201ENST00000562038 PI4KAP2A4QPH2 592 aa7.07□□□□□ -1.28
LINC01963-201ENST00000562038 PI4KAP1Q8N8J0 262 aa7.07□□□□□ -1.28
LINC01963-201ENST00000562038 ANKRD2Q9GZV1 360 aa7.07□□□□□ -1.28
LINC01963-201ENST00000562038 RCAN3Q9UKA8 241 aa7.07□□□□□ -1.28
LINC01963-201ENST00000562038 DDX19BQ9UMR2 479 aa7.07□□□□□ -1.28
LINC01963-201ENST00000562038 FOXO4P98177 505 aa7.07□□□□□ -1.28
LINC01963-201ENST00000562038 POLA2Q14181 598 aa7.07□□□□□ -1.28
LINC01963-201ENST00000562038 NBR1Q14596 966 aa7.07□□□□□ -1.28
LINC01963-201ENST00000562038 KRT24Q2M2I5 525 aa7.07□□□□□ -1.28
LINC01963-201ENST00000562038 CDCA7LQ96GN5 454 aa7.07□□□□□ -1.28
LINC01963-201ENST00000562038 PHAXQ9H814 394 aaKnown RBP7.07□□□□□ -1.28
LINC01963-201ENST00000562038 BSDC1Q9NW68 430 aaPredicted RBP7.07□□□□□ -1.28
LINC01963-201ENST00000562038 BCCIPQ9P287 314 aaKnown RBP eCLIP7.07□□□□□ -1.28
LINC01963-201ENST00000562038 LAS1LQ9Y4W2 734 aaKnown RBP7.07□□□□□ -1.28
LINC01963-201ENST00000562038 MROH5Q6ZUA9 1318 aa7.06□□□□□ -1.28
LINC01963-201ENST00000562038 IQCA1LA6NCM1 817 aa7.06□□□□□ -1.28
LINC01963-201ENST00000562038 EIF2S2P20042 333 aaKnown RBP7.06□□□□□ -1.28
LINC01963-201ENST00000562038 FKBP5Q13451 457 aaPredicted RBP7.06□□□□□ -1.28
LINC01963-201ENST00000562038 DEFB115Q30KQ5 88 aa7.06□□□□□ -1.28
LINC01963-201ENST00000562038 CCDC93Q567U6 631 aa7.06□□□□□ -1.28
LINC01963-201ENST00000562038 DALRD3Q5D0E6 543 aaKnown RBP7.06□□□□□ -1.28
LINC01963-201ENST00000562038 TTLL6Q8N841 843 aa7.06□□□□□ -1.28
LINC01963-201ENST00000562038 OTUD5Q96G74 571 aa7.06□□□□□ -1.28
LINC01963-201ENST00000562038 ZNF512BQ96KM6 892 aaPredicted RBP7.06□□□□□ -1.28
LINC01963-201ENST00000562038 TBC1D2BQ9UPU7 963 aa7.06□□□□□ -1.28
LINC01963-201ENST00000562038 MTMR7Q9Y216 660 aa7.06□□□□□ -1.28
LINC01963-201ENST00000562038 NOP58Q9Y2X3 529 aaKnown RBP7.06□□□□□ -1.28
LINC01963-201ENST00000562038 PHF14O94880 888 aa7.06□□□□□ -1.28
LINC01963-201ENST00000562038 FKBP4Q02790 459 aaKnown RBP eCLIP7.06□□□□□ -1.28
LINC01963-201ENST00000562038 COPRSQ9NQ92 184 aa7.06□□□□□ -1.28
LINC01963-201ENST00000562038 LEMD3Q9Y2U8 911 aa7.06□□□□□ -1.28
LINC01963-201ENST00000562038 MAP4K4O95819 1239 aaPredicted RBP7.05□□□□□ -1.28
LINC01963-201ENST00000562038 TRIM27P14373 513 aa7.05□□□□□ -1.28
LINC01963-201ENST00000562038 MYL6BP14649 208 aa7.05□□□□□ -1.28
LINC01963-201ENST00000562038 RBM10P98175 930 aaKnown RBP7.05□□□□□ -1.28
LINC01963-201ENST00000562038 G2E3Q7L622 706 aa7.05□□□□□ -1.28
LINC01963-201ENST00000562038 C2CD5Q86YS7 1000 aa7.05□□□□□ -1.28
LINC01963-201ENST00000562038 DZIP1LQ8IYY4 767 aaKnown RBP7.05□□□□□ -1.28
LINC01963-201ENST00000562038 NAP1L5Q96NT1 182 aaPredicted RBP7.05□□□□□ -1.28
LINC01963-201ENST00000562038 MYD88Q99836 296 aa7.05□□□□□ -1.28
LINC01963-201ENST00000562038 IRS4O14654 1257 aaPredicted RBP7.05□□□□□ -1.28
LINC01963-201ENST00000562038 SEMA3EO15041 775 aa7.05□□□□□ -1.28
LINC01963-201ENST00000562038 CENPBP07199 599 aaPredicted RBP7.05□□□□□ -1.28
LINC01963-201ENST00000562038 MVPQ14764 893 aaKnown RBP7.05□□□□□ -1.28
LINC01963-201ENST00000562038 ERFEQ4G0M1 354 aa7.05□□□□□ -1.28
LINC01963-201ENST00000562038 RPAP2Q8IXW5 612 aaPredicted RBP7.05□□□□□ -1.28
LINC01963-201ENST00000562038 ATP2B4P23634 1241 aa7.05□□□□□ -1.28
LINC01963-201ENST00000562038 ANKRD44Q8N8A2 993 aa7.05□□□□□ -1.28
LINC01963-201ENST00000562038 TTLL11Q8NHH1 800 aa7.05□□□□□ -1.28
LINC01963-201ENST00000562038 TRMT112Q9UI30 125 aaKnown RBP7.05□□□□□ -1.28
LINC01963-201ENST00000562038 NOB1Q9ULX3 412 aaKnown RBP7.05□□□□□ -1.28
LINC01963-201ENST00000562038 SUGT1Q9Y2Z0 365 aa7.05□□□□□ -1.28
LINC01963-201ENST00000562038 MYH7P12883 1935 aa7.04□□□□□ -1.28
LINC01963-201ENST00000562038 DDX60LQ5H9U9 1706 aaKnown RBP7.04□□□□□ -1.28
LINC01963-201ENST00000562038 RFX5P48382 616 aaPredicted RBP7.04□□□□□ -1.28
LINC01963-201ENST00000562038 CERS3Q8IU89 383 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms