RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 RPS12P25398 132 aaKnown RBP6.72□□□□□ -1.33
ZEB1-219ENST00000560721 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.72□□□□□ -1.33
ZEB1-219ENST00000560721 COL23A1Q86Y22 540 aaPredicted RBP6.72□□□□□ -1.33
ZEB1-219ENST00000560721 TTLL11Q8NHH1 800 aa6.72□□□□□ -1.33
ZEB1-219ENST00000560721 ATP6V0A2Q9Y487 856 aa6.72□□□□□ -1.33
ZEB1-219ENST00000560721 SSC5DA1L4H1 1573 aa6.72□□□□□ -1.33
ZEB1-219ENST00000560721 KCNQ2O43526 872 aa6.72□□□□□ -1.33
ZEB1-219ENST00000560721 ST5P78524 1137 aa6.72□□□□□ -1.33
ZEB1-219ENST00000560721 COPS6Q7L5N1 327 aa6.72□□□□□ -1.33
ZEB1-219ENST00000560721 RTKN2Q8IZC4 609 aa6.72□□□□□ -1.33
ZEB1-219ENST00000560721 MAP3K2Q9Y2U5 619 aa6.72□□□□□ -1.33
ZEB1-219ENST00000560721 MORC2Q9Y6X9 1032 aaPredicted RBP6.72□□□□□ -1.33
ZEB1-219ENST00000560721 SRGNP10124 158 aa6.71□□□□□ -1.33
ZEB1-219ENST00000560721 KCNA3P22001 575 aa6.71□□□□□ -1.33
ZEB1-219ENST00000560721 RCAN1P53805 252 aa6.71□□□□□ -1.33
ZEB1-219ENST00000560721 ALX1Q15699 326 aa6.71□□□□□ -1.33
ZEB1-219ENST00000560721 L3MBTL3Q96JM7 780 aaPredicted RBP6.71□□□□□ -1.33
ZEB1-219ENST00000560721 LRRC37A2A6NM11 1700 aa6.71□□□□□ -1.33
ZEB1-219ENST00000560721 ATRNL1Q5VV63 1379 aa6.71□□□□□ -1.33
ZEB1-219ENST00000560721 MYH1P12882 1939 aa6.71□□□□□ -1.34
ZEB1-219ENST00000560721 HIP1O00291 1037 aa6.71□□□□□ -1.34
ZEB1-219ENST00000560721 FGRP09769 529 aa6.71□□□□□ -1.34
ZEB1-219ENST00000560721 ATP5JP18859 108 aa6.71□□□□□ -1.34
ZEB1-219ENST00000560721 TNNT2P45379 298 aaPredicted RBP6.71□□□□□ -1.34
ZEB1-219ENST00000560721 SF3B2Q13435 895 aaKnown RBP6.71□□□□□ -1.34
ZEB1-219ENST00000560721 FAM43BQ6ZT52 329 aaPredicted RBP6.71□□□□□ -1.34
ZEB1-219ENST00000560721 ATG9AQ7Z3C6 839 aa6.71□□□□□ -1.34
ZEB1-219ENST00000560721 FBXO33Q7Z6M2 555 aa6.71□□□□□ -1.34
ZEB1-219ENST00000560721 CNKSR2Q8WXI2 1034 aa6.71□□□□□ -1.34
ZEB1-219ENST00000560721 SALL2Q9Y467 1007 aaPredicted RBP6.71□□□□□ -1.34
ZEB1-219ENST00000560721 PPP2R3BQ9Y5P8 575 aa6.71□□□□□ -1.34
ZEB1-219ENST00000560721 MYH2Q9UKX2 1941 aa6.71□□□□□ -1.34
ZEB1-219ENST00000560721 UQCRFS1P1P0C7P4 283 aa6.71□□□□□ -1.34
ZEB1-219ENST00000560721 PTPN12Q05209 780 aaKnown RBP6.71□□□□□ -1.34
ZEB1-219ENST00000560721 PRR5LQ6MZQ0 368 aa6.71□□□□□ -1.34
ZEB1-219ENST00000560721 TSR2Q969E8 191 aaKnown RBP6.71□□□□□ -1.34
ZEB1-219ENST00000560721 KIF1BPQ96EK5 621 aa6.71□□□□□ -1.34
ZEB1-219ENST00000560721 SCN9AQ15858 1988 aa6.7□□□□□ -1.34
ZEB1-219ENST00000560721 DDR1Q08345 913 aa6.7□□□□□ -1.34
ZEB1-219ENST00000560721 TMEM57Q8N5G2 664 aa6.7□□□□□ -1.34
ZEB1-219ENST00000560721 GAKO14976 1311 aa6.7□□□□□ -1.34
ZEB1-219ENST00000560721 APBA3O96018 575 aa6.7□□□□□ -1.34
ZEB1-219ENST00000560721 NFIXQ14938 502 aa6.7□□□□□ -1.34
ZEB1-219ENST00000560721 PROSER3Q2NL68 480 aa6.7□□□□□ -1.34
ZEB1-219ENST00000560721 BMP2KLQ5H9B9 411 aa6.7□□□□□ -1.34
ZEB1-219ENST00000560721 SIRT2Q8IXJ6 389 aa6.7□□□□□ -1.34
ZEB1-219ENST00000560721 MYO5AQ9Y4I1 1855 aaKnown RBP6.7□□□□□ -1.34
ZEB1-219ENST00000560721 EYA2O00167 538 aa6.69□□□□□ -1.34
ZEB1-219ENST00000560721 PDE4CQ08493 712 aa6.69□□□□□ -1.34
ZEB1-219ENST00000560721 LTV1Q96GA3 475 aaPredicted RBP6.69□□□□□ -1.34
ZEB1-219ENST00000560721 PTPRFP10586 1907 aa6.69□□□□□ -1.34
ZEB1-219ENST00000560721 MAST3O60307 1309 aa6.69□□□□□ -1.34
ZEB1-219ENST00000560721 PI4KAP2A4QPH2 592 aa6.69□□□□□ -1.34
ZEB1-219ENST00000560721 DCTN1Q14203 1278 aa6.69□□□□□ -1.34
ZEB1-219ENST00000560721 GSE1Q14687 1217 aa6.69□□□□□ -1.34
ZEB1-219ENST00000560721 NFKBIBQ15653 356 aa6.69□□□□□ -1.34
ZEB1-219ENST00000560721 SUSD4Q5VX71 490 aa6.69□□□□□ -1.34
ZEB1-219ENST00000560721 PI4KAP1Q8N8J0 262 aa6.69□□□□□ -1.34
ZEB1-219ENST00000560721 XDHP47989 1333 aa6.69□□□□□ -1.34
ZEB1-219ENST00000560721 ZPR1O75312 459 aa6.69□□□□□ -1.34
ZEB1-219ENST00000560721 ZFYP08048 801 aaPredicted RBP6.69□□□□□ -1.34
ZEB1-219ENST00000560721 PPP4CP60510 307 aa6.69□□□□□ -1.34
ZEB1-219ENST00000560721 G2E3Q7L622 706 aa6.69□□□□□ -1.34
ZEB1-219ENST00000560721 SKAP1Q86WV1 359 aa6.69□□□□□ -1.34
ZEB1-219ENST00000560721 ZGPATQ8N5A5 531 aaKnown RBP6.69□□□□□ -1.34
ZEB1-219ENST00000560721 DDX54Q8TDD1 881 aaKnown RBP6.69□□□□□ -1.34
ZEB1-219ENST00000560721 COL4A5P29400 1685 aa6.68□□□□□ -1.34
ZEB1-219ENST00000560721 ZNF280AP59817 542 aaPredicted RBP6.68□□□□□ -1.34
ZEB1-219ENST00000560721 LRRFIP1Q32MZ4 808 aaKnown RBP6.68□□□□□ -1.34
ZEB1-219ENST00000560721 SETDB2Q96T68 719 aa6.68□□□□□ -1.34
ZEB1-219ENST00000560721 UBTFL1P0CB47 393 aaPredicted RBP6.68□□□□□ -1.34
ZEB1-219ENST00000560721 RLBP1P12271 317 aa6.68□□□□□ -1.34
ZEB1-219ENST00000560721 TBC1D9BQ66K14 1250 aa6.68□□□□□ -1.34
ZEB1-219ENST00000560721 LPIN2Q92539 896 aa6.68□□□□□ -1.34
ZEB1-219ENST00000560721 TTF1Q15361 905 aaPredicted RBP6.68□□□□□ -1.34
ZEB1-219ENST00000560721 USPL1Q5W0Q7 1092 aa6.68□□□□□ -1.34
ZEB1-219ENST00000560721 SMYD5Q6GMV2 418 aa6.68□□□□□ -1.34
ZEB1-219ENST00000560721 TBC1D22AQ8WUA7 517 aa6.68□□□□□ -1.34
ZEB1-219ENST00000560721 COA1Q9GZY4 146 aa6.68□□□□□ -1.34
ZEB1-219ENST00000560721 ANAPC4Q9UJX5 808 aa6.68□□□□□ -1.34
ZEB1-219ENST00000560721 LAS1LQ9Y4W2 734 aaKnown RBP6.68□□□□□ -1.34
ZEB1-219ENST00000560721 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.67□□□□□ -1.34
ZEB1-219ENST00000560721 TRIM37O94972 964 aa6.67□□□□□ -1.34
ZEB1-219ENST00000560721 SLC5A1P13866 664 aa6.67□□□□□ -1.34
ZEB1-219ENST00000560721 RFC4P35249 363 aa6.67□□□□□ -1.34
ZEB1-219ENST00000560721 FKBP4Q02790 459 aaKnown RBP eCLIP6.67□□□□□ -1.34
ZEB1-219ENST00000560721 TTLL7Q6ZT98 887 aa6.67□□□□□ -1.34
ZEB1-219ENST00000560721 TDRD7Q8NHU6 1098 aaKnown RBP6.67□□□□□ -1.34
ZEB1-219ENST00000560721 PHAXQ9H814 394 aaKnown RBP6.67□□□□□ -1.34
ZEB1-219ENST00000560721 A1BGP04217 495 aa6.67□□□□□ -1.34
ZEB1-219ENST00000560721 SERPINB2P05120 415 aa6.67□□□□□ -1.34
ZEB1-219ENST00000560721 PUM3Q15397 648 aaKnown RBP6.67□□□□□ -1.34
ZEB1-219ENST00000560721 RCSD1Q6JBY9 416 aa6.67□□□□□ -1.34
ZEB1-219ENST00000560721 SUCLG2Q96I99 432 aa6.67□□□□□ -1.34
ZEB1-219ENST00000560721 MAP3K14Q99558 947 aa6.67□□□□□ -1.34
ZEB1-219ENST00000560721 HAUS7Q99871 368 aa6.67□□□□□ -1.34
ZEB1-219ENST00000560721 ANKRD18BA2A2Z9 1011 aa6.66□□□□□ -1.34
ZEB1-219ENST00000560721 GTF2E1P29083 439 aaPredicted RBP6.66□□□□□ -1.34
ZEB1-219ENST00000560721 EZH2Q15910 746 aaKnown RBP6.66□□□□□ -1.34
ZEB1-219ENST00000560721 AGBL3Q8NEM8 1001 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms