RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 TLR7Q9NYK1 1049 aaKnown RBP7.67□□□□□ -1.18
FOXN3-217ENST00000557572 ZBTB7BO15156 539 aaPredicted RBP7.66□□□□□ -1.18
FOXN3-217ENST00000557572 VSIG10LQ86VR7 867 aa7.66□□□□□ -1.18
FOXN3-217ENST00000557572 TRIM50Q86XT4 487 aa7.66□□□□□ -1.18
FOXN3-217ENST00000557572 TSEN2Q8NCE0 465 aaKnown RBP7.66□□□□□ -1.18
FOXN3-217ENST00000557572 NSUN5Q96P11 429 aaKnown RBP7.66□□□□□ -1.18
FOXN3-217ENST00000557572 C2orf49Q9BVC5 232 aaPredicted RBP7.66□□□□□ -1.18
FOXN3-217ENST00000557572 ATAD2Q6PL18 1390 aa7.66□□□□□ -1.18
FOXN3-217ENST00000557572 RTN1Q16799 776 aa7.65□□□□□ -1.18
FOXN3-217ENST00000557572 DUOXA2Q1HG44 320 aa7.65□□□□□ -1.18
FOXN3-217ENST00000557572 TXNDC11Q6PKC3 985 aa7.65□□□□□ -1.18
FOXN3-217ENST00000557572 NFXL1Q6ZNB6 911 aa7.65□□□□□ -1.18
FOXN3-217ENST00000557572 KIAA1211Q6ZU35 1233 aa7.65□□□□□ -1.18
FOXN3-217ENST00000557572 FBXL6Q8N531 539 aa7.65□□□□□ -1.18
FOXN3-217ENST00000557572 GDPD2Q9HCC8 539 aa7.65□□□□□ -1.18
FOXN3-217ENST00000557572 FARP2O94887 1054 aaPredicted RBP7.64□□□□□ -1.19
FOXN3-217ENST00000557572 PRNPP04156 253 aa7.64□□□□□ -1.19
FOXN3-217ENST00000557572 FOSL1P15407 271 aa7.64□□□□□ -1.19
FOXN3-217ENST00000557572 OSBPL1AQ9BXW6 950 aa7.64□□□□□ -1.19
FOXN3-217ENST00000557572 PSAPP07602 524 aa7.63□□□□□ -1.19
FOXN3-217ENST00000557572 CDC25BP30305 580 aa7.63□□□□□ -1.19
FOXN3-217ENST00000557572 ARSDP51689 593 aa7.63□□□□□ -1.19
FOXN3-217ENST00000557572 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.63□□□□□ -1.19
FOXN3-217ENST00000557572 CACTIN-AS1Q8N1I8 211 aa7.63□□□□□ -1.19
FOXN3-217ENST00000557572 STAG2Q8N3U4 1231 aa7.63□□□□□ -1.19
FOXN3-217ENST00000557572 SCG3Q8WXD2 468 aaKnown RBP7.63□□□□□ -1.19
FOXN3-217ENST00000557572 COL26A1Q96A83 441 aa7.63□□□□□ -1.19
FOXN3-217ENST00000557572 C11orf16Q9NQ32 467 aa7.63□□□□□ -1.19
FOXN3-217ENST00000557572 USP17L5A8MUK1 530 aa7.62□□□□□ -1.19
FOXN3-217ENST00000557572 M0R2N6 131 aa7.62□□□□□ -1.19
FOXN3-217ENST00000557572 ATP1A2P50993 1020 aa7.62□□□□□ -1.19
FOXN3-217ENST00000557572 AGBL5Q8NDL9 886 aa7.62□□□□□ -1.19
FOXN3-217ENST00000557572 CARD10Q9BWT7 1032 aa7.62□□□□□ -1.19
FOXN3-217ENST00000557572 PAPLNO95428 1278 aa7.61□□□□□ -1.19
FOXN3-217ENST00000557572 F13BP05160 661 aa7.61□□□□□ -1.19
FOXN3-217ENST00000557572 KSR1Q8IVT5 923 aa7.61□□□□□ -1.19
FOXN3-217ENST00000557572 NFATC2IPQ8NCF5 419 aa7.61□□□□□ -1.19
FOXN3-217ENST00000557572 FLCNQ8NFG4 579 aa7.61□□□□□ -1.19
FOXN3-217ENST00000557572 KLK14Q9P0G3 267 aa7.61□□□□□ -1.19
FOXN3-217ENST00000557572 DDX3YO15523 660 aaKnown RBP7.6□□□□□ -1.19
FOXN3-217ENST00000557572 PREPP48147 710 aa7.6□□□□□ -1.19
FOXN3-217ENST00000557572 CLDN10P78369 228 aa7.6□□□□□ -1.19
FOXN3-217ENST00000557572 NCANO14594 1321 aa7.59□□□□□ -1.19
FOXN3-217ENST00000557572 PRRG2O14669 202 aa7.59□□□□□ -1.19
FOXN3-217ENST00000557572 RASA1P20936 1047 aa7.59□□□□□ -1.19
FOXN3-217ENST00000557572 LILRA6Q6PI73 481 aa7.59□□□□□ -1.19
FOXN3-217ENST00000557572 UBASH3BQ8TF42 649 aa7.59□□□□□ -1.19
FOXN3-217ENST00000557572 LACRTQ9GZZ8 138 aa7.59□□□□□ -1.19
FOXN3-217ENST00000557572 BSDC1Q9NW68 430 aaPredicted RBP7.59□□□□□ -1.19
FOXN3-217ENST00000557572 USP20Q9Y2K6 914 aa7.59□□□□□ -1.19
FOXN3-217ENST00000557572 HIF3AQ9Y2N7 669 aa7.59□□□□□ -1.19
FOXN3-217ENST00000557572 MMP20O60882 483 aa7.58□□□□□ -1.2
FOXN3-217ENST00000557572 MAP4P27816 1152 aaKnown RBP7.58□□□□□ -1.2
FOXN3-217ENST00000557572 GAS2L2Q8NHY3 880 aa7.58□□□□□ -1.2
FOXN3-217ENST00000557572 RBM19Q9Y4C8 960 aaKnown RBP7.58□□□□□ -1.2
FOXN3-217ENST00000557572 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.58□□□□□ -1.2
FOXN3-217ENST00000557572 BIN1O00499 593 aa7.57□□□□□ -1.2
FOXN3-217ENST00000557572 FSCN2O14926 492 aa7.57□□□□□ -1.2
FOXN3-217ENST00000557572 GAS2O43903 313 aaKnown RBP7.57□□□□□ -1.2
FOXN3-217ENST00000557572 MICAL2O94851 1124 aa7.57□□□□□ -1.2
FOXN3-217ENST00000557572 KRTAP19-4Q3LI73 84 aa7.57□□□□□ -1.2
FOXN3-217ENST00000557572 ANKRD34AQ69YU3 496 aa7.57□□□□□ -1.2
FOXN3-217ENST00000557572 KLHL23Q8NBE8 558 aa7.57□□□□□ -1.2
FOXN3-217ENST00000557572 CARMIL2Q6F5E8 1435 aa7.56□□□□□ -1.2
FOXN3-217ENST00000557572 B8ZZF3 427 aa7.56□□□□□ -1.2
FOXN3-217ENST00000557572 CYP26A1O43174 497 aa7.56□□□□□ -1.2
FOXN3-217ENST00000557572 XYLBO75191 536 aa7.56□□□□□ -1.2
FOXN3-217ENST00000557572 RXRBP28702 533 aa7.56□□□□□ -1.2
FOXN3-217ENST00000557572 TMEM132AQ24JP5 1023 aa7.56□□□□□ -1.2
FOXN3-217ENST00000557572 FAM117BQ6P1L5 589 aa7.56□□□□□ -1.2
FOXN3-217ENST00000557572 OGFOD1Q8N543 542 aa7.56□□□□□ -1.2
FOXN3-217ENST00000557572 FOXD4L4Q8WXT5 416 aaPredicted RBP7.56□□□□□ -1.2
FOXN3-217ENST00000557572 PAK6Q9NQU5 681 aaPredicted RBP7.56□□□□□ -1.2
FOXN3-217ENST00000557572 PALM3A6NDB9 673 aaPredicted RBP7.55□□□□□ -1.2
FOXN3-217ENST00000557572 CDC27P30260 824 aa7.55□□□□□ -1.2
FOXN3-217ENST00000557572 DGKZQ13574 1117 aa7.55□□□□□ -1.2
FOXN3-217ENST00000557572 CPSF6Q16630 551 aaKnown RBP eCLIP7.55□□□□□ -1.2
FOXN3-217ENST00000557572 FDX2Q6P4F2 183 aa7.55□□□□□ -1.2
FOXN3-217ENST00000557572 CMTR1Q8N1G2 835 aaKnown RBP7.55□□□□□ -1.2
FOXN3-217ENST00000557572 LARGE2Q8N3Y3 721 aa7.55□□□□□ -1.2
FOXN3-217ENST00000557572 SLC38A3Q99624 504 aa7.55□□□□□ -1.2
FOXN3-217ENST00000557572 RTCBQ9Y3I0 505 aaKnown RBP7.55□□□□□ -1.2
FOXN3-217ENST00000557572 TM4SF5O14894 197 aa7.54□□□□□ -1.2
FOXN3-217ENST00000557572 ADAM11O75078 769 aa7.54□□□□□ -1.2
FOXN3-217ENST00000557572 EGFRP00533 1210 aa7.54□□□□□ -1.2
FOXN3-217ENST00000557572 CEP135Q66GS9 1140 aa7.54□□□□□ -1.2
FOXN3-217ENST00000557572 SHISA5Q8N114 240 aa7.54□□□□□ -1.2
FOXN3-217ENST00000557572 SOX18P35713 384 aa7.53□□□□□ -1.2
FOXN3-217ENST00000557572 SGO2Q562F6 1265 aa7.53□□□□□ -1.2
FOXN3-217ENST00000557572 KLHDC7BQ96G42 594 aa7.53□□□□□ -1.2
FOXN3-217ENST00000557572 ZNF594Q96JF6 807 aaPredicted RBP7.53□□□□□ -1.2
FOXN3-217ENST00000557572 METTL22Q9BUU2 404 aaPredicted RBP7.53□□□□□ -1.2
FOXN3-217ENST00000557572 RNF208Q9H0X6 261 aa7.53□□□□□ -1.2
FOXN3-217ENST00000557572 BUD31P41223 144 aaPredicted RBP7.52□□□□□ -1.21
FOXN3-217ENST00000557572 NFKBIBQ15653 356 aa7.52□□□□□ -1.21
FOXN3-217ENST00000557572 ALG2Q9H553 416 aa7.52□□□□□ -1.21
FOXN3-217ENST00000557572 HOXD8P13378 290 aaPredicted RBP7.51□□□□□ -1.21
FOXN3-217ENST00000557572 NEUROD2Q15784 382 aa7.51□□□□□ -1.21
FOXN3-217ENST00000557572 RGL4Q8IZJ4 473 aa7.51□□□□□ -1.21
FOXN3-217ENST00000557572 SIX5Q8N196 739 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms