RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 FZD1Q9UP38 647 aa18.22■□□□□ 0.51
SNRPF-203ENST00000551316 OTOFQ9HC10 1997 aa18.22■□□□□ 0.51
SNRPF-203ENST00000551316 ERVV-1B6SEH8 477 aa18.21■□□□□ 0.51
SNRPF-203ENST00000551316 PTPN12Q05209 780 aaKnown RBP18.2■□□□□ 0.5
SNRPF-203ENST00000551316 SREBF2Q12772 1141 aa18.2■□□□□ 0.5
SNRPF-203ENST00000551316 SHISA4Q96DD7 197 aa18.2■□□□□ 0.5
SNRPF-203ENST00000551316 PHACTR3Q96KR7 559 aa18.2■□□□□ 0.5
SNRPF-203ENST00000551316 NLRP3Q96P20 1036 aa18.2■□□□□ 0.5
SNRPF-203ENST00000551316 WTIPA6NIX2 430 aaPredicted RBP18.19■□□□□ 0.5
SNRPF-203ENST00000551316 GAS2L2Q8NHY3 880 aa18.19■□□□□ 0.5
SNRPF-203ENST00000551316 TMX4Q9H1E5 349 aaPredicted RBP18.19■□□□□ 0.5
SNRPF-203ENST00000551316 POLLQ9UGP5 575 aa18.19■□□□□ 0.5
SNRPF-203ENST00000551316 HCLS1P14317 486 aaPredicted RBP18.18■□□□□ 0.5
SNRPF-203ENST00000551316 ZNF280AP59817 542 aaPredicted RBP18.18■□□□□ 0.5
SNRPF-203ENST00000551316 WASHC4Q2M389 1173 aa18.18■□□□□ 0.5
SNRPF-203ENST00000551316 MCM10Q7L590 875 aa18.18■□□□□ 0.5
SNRPF-203ENST00000551316 PTCH2Q9Y6C5 1203 aa18.18■□□□□ 0.5
SNRPF-203ENST00000551316 PRUNE2Q8WUY3 3088 aa18.18■□□□□ 0.5
SNRPF-203ENST00000551316 DLG5Q8TDM6 1919 aa18.17■□□□□ 0.5
SNRPF-203ENST00000551316 SSC5DA1L4H1 1573 aa18.17■□□□□ 0.5
SNRPF-203ENST00000551316 DIAPH1O60610 1272 aaKnown RBP18.17■□□□□ 0.5
SNRPF-203ENST00000551316 BBOX1O75936 387 aa18.17■□□□□ 0.5
SNRPF-203ENST00000551316 GRAPQ13588 217 aa18.17■□□□□ 0.5
SNRPF-203ENST00000551316 PRKG1Q13976 671 aa18.17■□□□□ 0.5
SNRPF-203ENST00000551316 TTLL12Q14166 644 aaPredicted RBP18.17■□□□□ 0.5
SNRPF-203ENST00000551316 SLC10A5Q5PT55 438 aa18.17■□□□□ 0.5
SNRPF-203ENST00000551316 SPRYD7Q5W111 196 aa18.17■□□□□ 0.5
SNRPF-203ENST00000551316 IFNL1Q8IU54 200 aa18.17■□□□□ 0.5
SNRPF-203ENST00000551316 GRAPLQ8TC17 118 aaPredicted RBP18.17■□□□□ 0.5
SNRPF-203ENST00000551316 ZNF428Q96B54 188 aa18.17■□□□□ 0.5
SNRPF-203ENST00000551316 MUC3AQ02505 3323 aa18.16■□□□□ 0.5
SNRPF-203ENST00000551316 VIL1P09327 827 aaKnown RBP18.16■□□□□ 0.5
SNRPF-203ENST00000551316 DCTN1Q14203 1278 aa18.16■□□□□ 0.5
SNRPF-203ENST00000551316 TMEM106CQ9BVX2 250 aa18.16■□□□□ 0.5
SNRPF-203ENST00000551316 MYL6BP14649 208 aa18.15■□□□□ 0.5
SNRPF-203ENST00000551316 GPSM2P81274 684 aa18.15■□□□□ 0.5
SNRPF-203ENST00000551316 CRHR2Q13324 411 aa18.15■□□□□ 0.5
SNRPF-203ENST00000551316 KIF6Q6ZMV9 814 aa18.15■□□□□ 0.5
SNRPF-203ENST00000551316 Q7L0L9 218 aa18.15■□□□□ 0.5
SNRPF-203ENST00000551316 EFCC1Q9HA90 598 aa18.15■□□□□ 0.5
SNRPF-203ENST00000551316 NBPF9Q3BBW0 867 aa18.14■□□□□ 0.49
SNRPF-203ENST00000551316 AMER1Q5JTC6 1135 aaPredicted RBP18.14■□□□□ 0.49
SNRPF-203ENST00000551316 GIGYF2Q6Y7W6 1299 aaKnown RBP18.14■□□□□ 0.49
SNRPF-203ENST00000551316 ERO1AQ96HE7 468 aa18.14■□□□□ 0.49
SNRPF-203ENST00000551316 MIS18AQ9NYP9 233 aa18.14■□□□□ 0.49
SNRPF-203ENST00000551316 RRP7AQ9Y3A4 280 aaKnown RBP18.14■□□□□ 0.49
SNRPF-203ENST00000551316 LAMA2P24043 3122 aaKnown RBP18.13■□□□□ 0.49
SNRPF-203ENST00000551316 SLC4A8Q2Y0W8 1093 aa18.13■□□□□ 0.49
SNRPF-203ENST00000551316 CELF1Q92879 486 aaKnown RBP18.13■□□□□ 0.49
SNRPF-203ENST00000551316 MYOZ2Q9NPC6 264 aa18.13■□□□□ 0.49
SNRPF-203ENST00000551316 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.13■□□□□ 0.49
SNRPF-203ENST00000551316 SH3TC2Q8TF17 1288 aa18.12■□□□□ 0.49
SNRPF-203ENST00000551316 CLMNQ96JQ2 1002 aa18.12■□□□□ 0.49
SNRPF-203ENST00000551316 GMLQ99445 158 aa18.12■□□□□ 0.49
SNRPF-203ENST00000551316 NSFL1CQ9UNZ2 370 aaKnown RBP18.12■□□□□ 0.49
SNRPF-203ENST00000551316 C6orf229H3BNL8 230 aa18.11■□□□□ 0.49
SNRPF-203ENST00000551316 U2SURPO15042 1029 aaKnown RBP18.11■□□□□ 0.49
SNRPF-203ENST00000551316 SLC9C1Q4G0N8 1177 aa18.11■□□□□ 0.49
SNRPF-203ENST00000551316 PPP1R42Q7Z4L9 355 aa18.11■□□□□ 0.49
SNRPF-203ENST00000551316 DPF3Q92784 378 aa18.11■□□□□ 0.49
SNRPF-203ENST00000551316 UTP14AQ9BVJ6 771 aaKnown RBP18.11■□□□□ 0.49
SNRPF-203ENST00000551316 ECM29Q5VYK3 1845 aa18.1■□□□□ 0.49
SNRPF-203ENST00000551316 ALDH1A1P00352 501 aa18.1■□□□□ 0.49
SNRPF-203ENST00000551316 GJA5P36382 358 aa18.1■□□□□ 0.49
SNRPF-203ENST00000551316 LDLRAD1Q5T700 205 aa18.1■□□□□ 0.49
SNRPF-203ENST00000551316 RSBN1LQ6PCB5 846 aaPredicted RBP18.1■□□□□ 0.49
SNRPF-203ENST00000551316 DDX46Q7L014 1031 aaKnown RBP18.1■□□□□ 0.49
SNRPF-203ENST00000551316 LRP10Q7Z4F1 713 aa18.1■□□□□ 0.49
SNRPF-203ENST00000551316 PARP10Q53GL7 1025 aa18.09■□□□□ 0.49
SNRPF-203ENST00000551316 UBE2Q1Q7Z7E8 422 aa18.09■□□□□ 0.49
SNRPF-203ENST00000551316 TBC1D16Q8TBP0 767 aa18.09■□□□□ 0.49
SNRPF-203ENST00000551316 THUMPD2Q9BTF0 503 aaKnown RBP18.09■□□□□ 0.49
SNRPF-203ENST00000551316 SPEF2Q9C093 1822 aa18.08■□□□□ 0.48
SNRPF-203ENST00000551316 PRKAR2BP31323 418 aa18.08■□□□□ 0.48
SNRPF-203ENST00000551316 WNK4Q96J92 1243 aa18.08■□□□□ 0.48
SNRPF-203ENST00000551316 PTPN18Q99952 460 aa18.08■□□□□ 0.48
SNRPF-203ENST00000551316 MXD3Q9BW11 206 aa18.08■□□□□ 0.48
SNRPF-203ENST00000551316 MANSC4A6NHS7 340 aaPredicted RBP18.07■□□□□ 0.48
SNRPF-203ENST00000551316 ZBTB7BO15156 539 aaPredicted RBP18.07■□□□□ 0.48
SNRPF-203ENST00000551316 SP3Q02447 781 aa18.07■□□□□ 0.48
SNRPF-203ENST00000551316 TCIRG1Q13488 830 aa18.07■□□□□ 0.48
SNRPF-203ENST00000551316 MTFR1Q15390 333 aa18.07■□□□□ 0.48
SNRPF-203ENST00000551316 RSPH6AQ9H0K4 717 aa18.07■□□□□ 0.48
SNRPF-203ENST00000551316 ANGEL1Q9UNK9 670 aaKnown RBP18.07■□□□□ 0.48
SNRPF-203ENST00000551316 SASH1O94885 1247 aa18.06■□□□□ 0.48
SNRPF-203ENST00000551316 ARHGAP39Q9C0H5 1083 aa18.06■□□□□ 0.48
SNRPF-203ENST00000551316 RAPGEFL1Q9UHV5 662 aa18.06■□□□□ 0.48
SNRPF-203ENST00000551316 ERBB4Q15303 1308 aa18.05■□□□□ 0.48
SNRPF-203ENST00000551316 ANXA1P04083 346 aa18.05■□□□□ 0.48
SNRPF-203ENST00000551316 USP17L8P0C7I0 530 aa18.05■□□□□ 0.48
SNRPF-203ENST00000551316 PROSER3Q2NL68 480 aa18.05■□□□□ 0.48
SNRPF-203ENST00000551316 NLRP10Q86W26 655 aa18.05■□□□□ 0.48
SNRPF-203ENST00000551316 DEFB123Q8N688 67 aa18.05■□□□□ 0.48
SNRPF-203ENST00000551316 AGBL3Q8NEM8 1001 aa18.05■□□□□ 0.48
SNRPF-203ENST00000551316 STXBP5LQ9Y2K9 1186 aa18.05■□□□□ 0.48
SNRPF-203ENST00000551316 TTC28Q96AY4 2481 aa18.05■□□□□ 0.48
SNRPF-203ENST00000551316 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.04■□□□□ 0.48
SNRPF-203ENST00000551316 WNT10BO00744 389 aa18.03■□□□□ 0.48
SNRPF-203ENST00000551316 PRDM6Q9NQX0 595 aa18.03■□□□□ 0.48
SNRPF-203ENST00000551316 KNSTRNQ9Y448 316 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms