RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 EIF2S2P20042 333 aaKnown RBP12.18□□□□□ -0.46
SSH1-205ENST00000546812 SF3B3Q15393 1217 aaKnown RBP12.18□□□□□ -0.46
SSH1-205ENST00000546812 MOB2Q70IA6 237 aa12.18□□□□□ -0.46
SSH1-205ENST00000546812 COPS6Q7L5N1 327 aa12.18□□□□□ -0.46
SSH1-205ENST00000546812 TBC1D16Q8TBP0 767 aa12.18□□□□□ -0.46
SSH1-205ENST00000546812 CELF1Q92879 486 aaKnown RBP12.18□□□□□ -0.46
SSH1-205ENST00000546812 CFHR5Q9BXR6 569 aa12.18□□□□□ -0.46
SSH1-205ENST00000546812 ZC3H12CQ9C0D7 883 aaKnown RBP12.18□□□□□ -0.46
SSH1-205ENST00000546812 ANXA1P04083 346 aa12.17□□□□□ -0.46
SSH1-205ENST00000546812 NEFMP07197 916 aa12.17□□□□□ -0.46
SSH1-205ENST00000546812 PPP2R1AP30153 589 aa12.17□□□□□ -0.46
SSH1-205ENST00000546812 FXR1P51114 621 aaKnown RBP eCLIP12.17□□□□□ -0.46
SSH1-205ENST00000546812 INTS3Q68E01 1043 aaKnown RBP12.17□□□□□ -0.46
SSH1-205ENST00000546812 AGBL3Q8NEM8 1001 aa12.17□□□□□ -0.46
SSH1-205ENST00000546812 NECTIN2Q92692 538 aa12.17□□□□□ -0.46
SSH1-205ENST00000546812 CENPFP49454 3210 aa12.16□□□□□ -0.46
SSH1-205ENST00000546812 PITPNM2Q9BZ72 1349 aa12.16□□□□□ -0.46
SSH1-205ENST00000546812 SREBF2Q12772 1141 aa12.16□□□□□ -0.46
SSH1-205ENST00000546812 AIMP1Q12904 312 aaKnown RBP12.16□□□□□ -0.46
SSH1-205ENST00000546812 RSBN1LQ6PCB5 846 aaPredicted RBP12.16□□□□□ -0.46
SSH1-205ENST00000546812 XAGE3Q8WTP9 111 aa12.16□□□□□ -0.46
SSH1-205ENST00000546812 MYOZ2Q9NPC6 264 aa12.16□□□□□ -0.46
SSH1-205ENST00000546812 POLR2AP24928 1970 aaKnown RBP12.16□□□□□ -0.46
SSH1-205ENST00000546812 POTEFA5A3E0 1075 aa12.15□□□□□ -0.46
SSH1-205ENST00000546812 G3V3G9 751 aa12.15□□□□□ -0.46
SSH1-205ENST00000546812 USP17L8P0C7I0 530 aa12.15□□□□□ -0.46
SSH1-205ENST00000546812 RPS8P62241 208 aaKnown RBP12.15□□□□□ -0.46
SSH1-205ENST00000546812 NFE2L2Q16236 605 aa12.15□□□□□ -0.46
SSH1-205ENST00000546812 DCAF8Q5TAQ9 597 aa12.15□□□□□ -0.46
SSH1-205ENST00000546812 GMLQ99445 158 aa12.15□□□□□ -0.46
SSH1-205ENST00000546812 R3HDMLQ9H3Y0 253 aa12.15□□□□□ -0.46
SSH1-205ENST00000546812 PODXL2Q9NZ53 605 aa12.15□□□□□ -0.46
SSH1-205ENST00000546812 TSPYL4Q9UJ04 414 aa12.15□□□□□ -0.46
SSH1-205ENST00000546812 ZNF609O15014 1411 aa12.14□□□□□ -0.47
SSH1-205ENST00000546812 MKRN3Q13064 507 aaKnown RBP12.14□□□□□ -0.47
SSH1-205ENST00000546812 TTLL12Q14166 644 aaPredicted RBP12.14□□□□□ -0.47
SSH1-205ENST00000546812 PRAMEF18Q5VWM3 479 aa12.14□□□□□ -0.47
SSH1-205ENST00000546812 FAM89AQ96GI7 184 aa12.14□□□□□ -0.47
SSH1-205ENST00000546812 PLEKHF1Q96S99 279 aa12.14□□□□□ -0.47
SSH1-205ENST00000546812 SCAF8Q9UPN6 1271 aaKnown RBP12.14□□□□□ -0.47
SSH1-205ENST00000546812 PAPPA2Q9BXP8 1791 aa12.14□□□□□ -0.47
SSH1-205ENST00000546812 BRCA2P51587 3418 aa12.14□□□□□ -0.47
SSH1-205ENST00000546812 ANKRD36CQ5JPF3 1778 aa12.13□□□□□ -0.47
SSH1-205ENST00000546812 UFL1O94874 794 aa12.13□□□□□ -0.47
SSH1-205ENST00000546812 ALDH1A1P00352 501 aa12.13□□□□□ -0.47
SSH1-205ENST00000546812 ZNF428Q96B54 188 aa12.13□□□□□ -0.47
SSH1-205ENST00000546812 TRIM17Q9Y577 477 aa12.13□□□□□ -0.47
SSH1-205ENST00000546812 KDM3BQ7LBC6 1761 aa12.13□□□□□ -0.47
SSH1-205ENST00000546812 A0A0C4DFX4 3053 aa12.12□□□□□ -0.47
SSH1-205ENST00000546812 LRRC37AA6NMS7 1700 aa12.12□□□□□ -0.47
SSH1-205ENST00000546812 BABAM1Q9NWV8 329 aa12.12□□□□□ -0.47
SSH1-205ENST00000546812 ANKIB1Q9P2G1 1089 aa12.12□□□□□ -0.47
SSH1-205ENST00000546812 GGA1Q9UJY5 639 aa12.12□□□□□ -0.47
SSH1-205ENST00000546812 USP17L3A6NCW0 530 aa12.11□□□□□ -0.47
SSH1-205ENST00000546812 USP17L4A6NCW7 530 aa12.11□□□□□ -0.47
SSH1-205ENST00000546812 NF2P35240 595 aa12.11□□□□□ -0.47
SSH1-205ENST00000546812 PTPN12Q05209 780 aaKnown RBP12.11□□□□□ -0.47
SSH1-205ENST00000546812 NBPF9Q3BBW0 867 aa12.11□□□□□ -0.47
SSH1-205ENST00000546812 OTOP1Q7RTM1 612 aa12.11□□□□□ -0.47
SSH1-205ENST00000546812 USP17L1Q7RTZ2 530 aa12.11□□□□□ -0.47
SSH1-205ENST00000546812 ISCA1Q9BUE6 129 aa12.11□□□□□ -0.47
SSH1-205ENST00000546812 SZT2Q5T011 3432 aa12.11□□□□□ -0.47
SSH1-205ENST00000546812 IRS4O14654 1257 aaPredicted RBP12.1□□□□□ -0.47
SSH1-205ENST00000546812 EN2P19622 333 aaPredicted RBP12.1□□□□□ -0.47
SSH1-205ENST00000546812 INHBEP58166 350 aa12.1□□□□□ -0.47
SSH1-205ENST00000546812 LDLRAD1Q5T700 205 aa12.1□□□□□ -0.47
SSH1-205ENST00000546812 SPRYD7Q5W111 196 aa12.1□□□□□ -0.47
SSH1-205ENST00000546812 ARMC9Q7Z3E5 817 aa12.1□□□□□ -0.47
SSH1-205ENST00000546812 PODNQ7Z5L7 613 aa12.1□□□□□ -0.47
SSH1-205ENST00000546812 PLBD2Q8NHP8 589 aa12.1□□□□□ -0.47
SSH1-205ENST00000546812 COLQQ9Y215 455 aaPredicted RBP12.1□□□□□ -0.47
SSH1-205ENST00000546812 PTPN22Q9Y2R2 807 aa12.1□□□□□ -0.47
SSH1-205ENST00000546812 KIAA0100Q14667 2235 aaKnown RBP12.1□□□□□ -0.47
SSH1-205ENST00000546812 LAMB2P55268 1798 aa12.1□□□□□ -0.47
SSH1-205ENST00000546812 TAF1P21675 1872 aa12.09□□□□□ -0.47
SSH1-205ENST00000546812 ATP5J2-PTCD1G3V325 749 aa12.09□□□□□ -0.47
SSH1-205ENST00000546812 TRIM28Q13263 835 aaKnown RBP12.09□□□□□ -0.47
SSH1-205ENST00000546812 RTL5Q5HYW3 569 aaPredicted RBP12.09□□□□□ -0.47
SSH1-205ENST00000546812 ANKRD13DQ6ZTN6 518 aa12.09□□□□□ -0.47
SSH1-205ENST00000546812 IFNL1Q8IU54 200 aa12.09□□□□□ -0.47
SSH1-205ENST00000546812 ARMC5Q96C12 935 aa12.09□□□□□ -0.47
SSH1-205ENST00000546812 PNNQ9H307 717 aaKnown RBP12.09□□□□□ -0.47
SSH1-205ENST00000546812 MANSC4A6NHS7 340 aaPredicted RBP12.08□□□□□ -0.48
SSH1-205ENST00000546812 WNT10BO00744 389 aa12.08□□□□□ -0.48
SSH1-205ENST00000546812 OGFOD1Q8N543 542 aa12.08□□□□□ -0.48
SSH1-205ENST00000546812 SEC31BQ9NQW1 1179 aa12.08□□□□□ -0.48
SSH1-205ENST00000546812 SCN9AQ15858 1988 aa12.08□□□□□ -0.48
SSH1-205ENST00000546812 MAPK8IP3Q9UPT6 1336 aa12.08□□□□□ -0.48
SSH1-205ENST00000546812 HSP90B1P14625 803 aaKnown RBP12.07□□□□□ -0.48
SSH1-205ENST00000546812 PRKG1Q13976 671 aa12.07□□□□□ -0.48
SSH1-205ENST00000546812 ERO1AQ96HE7 468 aa12.07□□□□□ -0.48
SSH1-205ENST00000546812 CHPF2Q9P2E5 772 aa12.07□□□□□ -0.48
SSH1-205ENST00000546812 RANBP2P49792 3224 aaKnown RBP12.07□□□□□ -0.48
SSH1-205ENST00000546812 COL4A1P02462 1669 aa12.06□□□□□ -0.48
SSH1-205ENST00000546812 TRIOBPQ9H2D6 2365 aa12.06□□□□□ -0.48
SSH1-205ENST00000546812 ATP2B4P23634 1241 aa12.06□□□□□ -0.48
SSH1-205ENST00000546812 MMP14P50281 582 aa12.06□□□□□ -0.48
SSH1-205ENST00000546812 RIPK4P57078 832 aa12.06□□□□□ -0.48
SSH1-205ENST00000546812 DACT2Q5SW24 774 aa12.06□□□□□ -0.48
SSH1-205ENST00000546812 ZBTB38Q8NAP3 1195 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms