RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 PPP1R9BQ96SB3 815 aa13.77□□□□□ -0.2
EIF3A-203ENST00000541549 TTC41PQ6P2S7 1318 aa13.77□□□□□ -0.2
EIF3A-203ENST00000541549 MACROD2A1Z1Q3 448 aa13.77□□□□□ -0.21
EIF3A-203ENST00000541549 TUBB4AP04350 444 aa13.77□□□□□ -0.21
EIF3A-203ENST00000541549 CCDC96Q2M329 555 aa13.77□□□□□ -0.21
EIF3A-203ENST00000541549 DNAJC21Q5F1R6 531 aaKnown RBP13.77□□□□□ -0.21
EIF3A-203ENST00000541549 MICALL1Q8N3F8 863 aa13.77□□□□□ -0.21
EIF3A-203ENST00000541549 PRC1O43663 620 aa13.77□□□□□ -0.21
EIF3A-203ENST00000541549 PPP1R12BO60237 982 aaPredicted RBP13.77□□□□□ -0.21
EIF3A-203ENST00000541549 FGFR1OPO95684 399 aaKnown RBP13.77□□□□□ -0.21
EIF3A-203ENST00000541549 SLC39A6Q13433 755 aa13.77□□□□□ -0.21
EIF3A-203ENST00000541549 CCDC40Q4G0X9 1142 aa13.77□□□□□ -0.21
EIF3A-203ENST00000541549 ZNF569Q5MCW4 686 aa13.77□□□□□ -0.21
EIF3A-203ENST00000541549 DHX58Q96C10 678 aa13.77□□□□□ -0.21
EIF3A-203ENST00000541549 MSH6P52701 1360 aa13.76□□□□□ -0.21
EIF3A-203ENST00000541549 ANKRD18BA2A2Z9 1011 aa13.76□□□□□ -0.21
EIF3A-203ENST00000541549 SPTY2D1Q68D10 685 aaPredicted RBP13.76□□□□□ -0.21
EIF3A-203ENST00000541549 CWC25Q9NXE8 425 aaPredicted RBP13.76□□□□□ -0.21
EIF3A-203ENST00000541549 CUL7Q14999 1698 aa13.76□□□□□ -0.21
EIF3A-203ENST00000541549 ADGRL1O94910 1474 aa13.76□□□□□ -0.21
EIF3A-203ENST00000541549 CAVIN4Q5BKX8 364 aa13.76□□□□□ -0.21
EIF3A-203ENST00000541549 KSR2Q6VAB6 950 aa13.76□□□□□ -0.21
EIF3A-203ENST00000541549 PLCD3Q8N3E9 789 aa13.76□□□□□ -0.21
EIF3A-203ENST00000541549 INCENPQ9NQS7 918 aa13.76□□□□□ -0.21
EIF3A-203ENST00000541549 GUCA1BQ9UMX6 200 aa13.76□□□□□ -0.21
EIF3A-203ENST00000541549 BRD1O95696 1058 aa13.76□□□□□ -0.21
EIF3A-203ENST00000541549 DHX32Q7L7V1 743 aaKnown RBP13.76□□□□□ -0.21
EIF3A-203ENST00000541549 CEP112Q8N8E3 955 aa13.76□□□□□ -0.21
EIF3A-203ENST00000541549 EHBP1Q8NDI1 1231 aa13.76□□□□□ -0.21
EIF3A-203ENST00000541549 CAPZA3Q96KX2 299 aa13.76□□□□□ -0.21
EIF3A-203ENST00000541549 SNX14Q9Y5W7 946 aa13.76□□□□□ -0.21
EIF3A-203ENST00000541549 ZRSR2Q15696 482 aaKnown RBP13.76□□□□□ -0.21
EIF3A-203ENST00000541549 ANKLE2Q86XL3 938 aa13.76□□□□□ -0.21
EIF3A-203ENST00000541549 RAB34Q9BZG1 259 aa13.76□□□□□ -0.21
EIF3A-203ENST00000541549 ALDH1L1O75891 902 aa13.75□□□□□ -0.21
EIF3A-203ENST00000541549 RXRAP19793 462 aa13.75□□□□□ -0.21
EIF3A-203ENST00000541549 CYLC1P35663 651 aaPredicted RBP13.75□□□□□ -0.21
EIF3A-203ENST00000541549 FAM160A1Q05DH4 1040 aa13.75□□□□□ -0.21
EIF3A-203ENST00000541549 PPP2R3AQ06190 1150 aa13.75□□□□□ -0.21
EIF3A-203ENST00000541549 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.75□□□□□ -0.216e-11■■■■■ 38.9
EIF3A-203ENST00000541549 ZMYM4Q5VZL5 1548 aa13.75□□□□□ -0.21
EIF3A-203ENST00000541549 FSD2A1L4K1 749 aa13.75□□□□□ -0.21
EIF3A-203ENST00000541549 HSF2BPO75031 334 aa13.75□□□□□ -0.21
EIF3A-203ENST00000541549 SLC5A1P13866 664 aa13.75□□□□□ -0.21
EIF3A-203ENST00000541549 ZNF75DP51815 510 aa13.75□□□□□ -0.21
EIF3A-203ENST00000541549 WTAPQ15007 396 aa13.75□□□□□ -0.21
EIF3A-203ENST00000541549 SLC4A8Q2Y0W8 1093 aa13.75□□□□□ -0.21
EIF3A-203ENST00000541549 LINS1Q8NG48 757 aa13.75□□□□□ -0.21
EIF3A-203ENST00000541549 CTAGE1Q96RT6 745 aa13.75□□□□□ -0.21
EIF3A-203ENST00000541549 CARD6Q9BX69 1037 aa13.75□□□□□ -0.21
EIF3A-203ENST00000541549 SBNO2Q9Y2G9 1366 aa13.75□□□□□ -0.21
EIF3A-203ENST00000541549 ZNF500O60304 480 aaPredicted RBP13.75□□□□□ -0.21
EIF3A-203ENST00000541549 CKAP4Q07065 602 aaKnown RBP13.75□□□□□ -0.21
EIF3A-203ENST00000541549 SPAG1Q07617 926 aa13.75□□□□□ -0.21
EIF3A-203ENST00000541549 VAT1LQ9HCJ6 419 aa13.75□□□□□ -0.21
EIF3A-203ENST00000541549 ZNF444Q8N0Y2 327 aaPredicted RBP13.74□□□□□ -0.21
EIF3A-203ENST00000541549 COL17A1Q9UMD9 1497 aaPredicted RBP13.74□□□□□ -0.21
EIF3A-203ENST00000541549 EBAG9O00559 213 aa13.74□□□□□ -0.21
EIF3A-203ENST00000541549 SGSM2O43147 1006 aa13.74□□□□□ -0.21
EIF3A-203ENST00000541549 MYL5Q02045 173 aa13.74□□□□□ -0.21
EIF3A-203ENST00000541549 SMC1AQ14683 1233 aaKnown RBP13.74□□□□□ -0.21
EIF3A-203ENST00000541549 TMOD3Q9NYL9 352 aa13.74□□□□□ -0.21
EIF3A-203ENST00000541549 PNMA6EA0A0J9YXQ4 647 aa13.74□□□□□ -0.21
EIF3A-203ENST00000541549 TSPY2A6NKD2 308 aa13.74□□□□□ -0.21
EIF3A-203ENST00000541549 ZEB2O60315 1214 aa13.74□□□□□ -0.21
EIF3A-203ENST00000541549 GSPT1P15170 499 aaKnown RBP13.74□□□□□ -0.21
EIF3A-203ENST00000541549 RBM5P52756 815 aaKnown RBP eCLIP13.74□□□□□ -0.21
EIF3A-203ENST00000541549 TMEM266Q2M3C6 531 aa13.74□□□□□ -0.21
EIF3A-203ENST00000541549 SLC9C2Q5TAH2 1124 aa13.74□□□□□ -0.21
EIF3A-203ENST00000541549 CTNNBL1Q8WYA6 563 aaPredicted RBP13.74□□□□□ -0.21
EIF3A-203ENST00000541549 BAG1Q99933 345 aaPredicted RBP13.74□□□□□ -0.21
EIF3A-203ENST00000541549 GBP2P32456 591 aaPredicted RBP13.73□□□□□ -0.21
EIF3A-203ENST00000541549 PIP4K2BP78356 416 aa13.73□□□□□ -0.21
EIF3A-203ENST00000541549 LRMPQ12912 555 aa13.73□□□□□ -0.21
EIF3A-203ENST00000541549 TTF1Q15361 905 aaPredicted RBP13.73□□□□□ -0.21
EIF3A-203ENST00000541549 DZIP1Q86YF9 867 aaKnown RBP13.73□□□□□ -0.21
EIF3A-203ENST00000541549 RTN1Q16799 776 aa13.73□□□□□ -0.21
EIF3A-203ENST00000541549 ANKRD18AQ8IVF6 992 aa13.73□□□□□ -0.21
EIF3A-203ENST00000541549 PAG1Q9NWQ8 432 aa13.73□□□□□ -0.21
EIF3A-203ENST00000541549 ZFYP08048 801 aaPredicted RBP13.73□□□□□ -0.21
EIF3A-203ENST00000541549 SNRPA1P09661 255 aaKnown RBP13.73□□□□□ -0.21
EIF3A-203ENST00000541549 UBE4AQ14139 1066 aa13.73□□□□□ -0.21
EIF3A-203ENST00000541549 KRBA2Q6ZNG9 492 aa13.73□□□□□ -0.21
EIF3A-203ENST00000541549 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.73□□□□□ -0.21
EIF3A-203ENST00000541549 GPT2Q8TD30 523 aa13.73□□□□□ -0.21
EIF3A-203ENST00000541549 LEO1Q8WVC0 666 aaPredicted RBP13.73□□□□□ -0.21
EIF3A-203ENST00000541549 RASSF4Q9H2L5 321 aa13.73□□□□□ -0.21
EIF3A-203ENST00000541549 NCOA5Q9HCD5 579 aaKnown RBP13.73□□□□□ -0.21
EIF3A-203ENST00000541549 GRIN2AQ12879 1464 aa13.73□□□□□ -0.21
EIF3A-203ENST00000541549 A0A1W2PP64 1363 aa13.72□□□□□ -0.21
EIF3A-203ENST00000541549 CALML4Q96GE6 196 aa13.72□□□□□ -0.21
EIF3A-203ENST00000541549 EZRP15311 586 aaKnown RBP13.72□□□□□ -0.21
EIF3A-203ENST00000541549 AMPD3Q01432 767 aa13.72□□□□□ -0.21
EIF3A-203ENST00000541549 FAM227BQ96M60 508 aa13.72□□□□□ -0.21
EIF3A-203ENST00000541549 CLSTN2Q9H4D0 955 aa13.72□□□□□ -0.21
EIF3A-203ENST00000541549 IQSEC3Q9UPP2 1182 aaPredicted RBP13.72□□□□□ -0.21
EIF3A-203ENST00000541549 TRIM75PA6NK02 468 aa13.72□□□□□ -0.21
EIF3A-203ENST00000541549 KIF5AQ12840 1032 aa13.72□□□□□ -0.21
EIF3A-203ENST00000541549 OTUD7BQ6GQQ9 843 aa13.72□□□□□ -0.21
EIF3A-203ENST00000541549 CDC37L1Q7L3B6 337 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms