RNA–Protein interactions for RNA: ENST00000540122.5

PUDP-206, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-206ENST00000540122 NLRP10Q86W26 655 aa20.53■□□□□ 0.88
PUDP-206ENST00000540122 THUMPD2Q9BTF0 503 aaKnown RBP20.53■□□□□ 0.88
PUDP-206ENST00000540122 TRIM17Q9Y577 477 aa20.53■□□□□ 0.88
PUDP-206ENST00000540122 TAF1P21675 1872 aa20.53■□□□□ 0.88
PUDP-206ENST00000540122 DLL1O00548 723 aa20.52■□□□□ 0.88
PUDP-206ENST00000540122 GPSM2P81274 684 aa20.52■□□□□ 0.88
PUDP-206ENST00000540122 EYA3Q99504 573 aa20.52■□□□□ 0.88
PUDP-206ENST00000540122 SCAF8Q9UPN6 1271 aaKnown RBP20.52■□□□□ 0.88
PUDP-206ENST00000540122 PITPNM2Q9BZ72 1349 aa20.52■□□□□ 0.87
PUDP-206ENST00000540122 RBBP6Q7Z6E9 1792 aaKnown RBP20.51■□□□□ 0.87
PUDP-206ENST00000540122 U2AF1L5P0DN76 240 aaPredicted RBP20.51■□□□□ 0.87
PUDP-206ENST00000540122 EN2P19622 333 aaPredicted RBP20.51■□□□□ 0.87
PUDP-206ENST00000540122 U2AF1Q01081 240 aaKnown RBP eCLIP20.51■□□□□ 0.87
PUDP-206ENST00000540122 OTOP1Q7RTM1 612 aa20.51■□□□□ 0.87
PUDP-206ENST00000540122 TRMT112Q9UI30 125 aaKnown RBP20.51■□□□□ 0.87
PUDP-206ENST00000540122 SH3TC1Q8TE82 1336 aa20.51■□□□□ 0.87
PUDP-206ENST00000540122 PRAMEF18Q5VWM3 479 aa20.5■□□□□ 0.87
PUDP-206ENST00000540122 CELF1Q92879 486 aaKnown RBP20.5■□□□□ 0.87
PUDP-206ENST00000540122 CFAP53Q96M91 514 aa20.5■□□□□ 0.87
PUDP-206ENST00000540122 NUDCQ9Y266 331 aa20.5■□□□□ 0.87
PUDP-206ENST00000540122 ZNF609O15014 1411 aa20.5■□□□□ 0.87
PUDP-206ENST00000540122 SCN9AQ15858 1988 aa20.5■□□□□ 0.87
PUDP-206ENST00000540122 TTLL12Q14166 644 aaPredicted RBP20.49■□□□□ 0.87
PUDP-206ENST00000540122 PDIA6Q15084 440 aa20.49■□□□□ 0.87
PUDP-206ENST00000540122 TBC1D16Q8TBP0 767 aa20.49■□□□□ 0.87
PUDP-206ENST00000540122 HSP90AB3PQ58FF7 597 aa20.48■□□□□ 0.87
PUDP-206ENST00000540122 RSBN1LQ6PCB5 846 aaPredicted RBP20.48■□□□□ 0.87
PUDP-206ENST00000540122 AGBL3Q8NEM8 1001 aa20.48■□□□□ 0.87
PUDP-206ENST00000540122 MYOZ2Q9NPC6 264 aa20.48■□□□□ 0.87
PUDP-206ENST00000540122 PROSER3Q2NL68 480 aa20.47■□□□□ 0.87
PUDP-206ENST00000540122 COL4A1P02462 1669 aa20.47■□□□□ 0.87
PUDP-206ENST00000540122 ALDH1A1P00352 501 aa20.46■□□□□ 0.87
PUDP-206ENST00000540122 ARMC5Q96C12 935 aa20.46■□□□□ 0.87
PUDP-206ENST00000540122 ZC3H12CQ9C0D7 883 aaKnown RBP20.46■□□□□ 0.87
PUDP-206ENST00000540122 ANXA1P04083 346 aa20.45■□□□□ 0.86
PUDP-206ENST00000540122 USP17L8P0C7I0 530 aa20.45■□□□□ 0.86
PUDP-206ENST00000540122 NECTIN2Q92692 538 aa20.45■□□□□ 0.86
PUDP-206ENST00000540122 GMLQ99445 158 aa20.45■□□□□ 0.86
PUDP-206ENST00000540122 PTPN22Q9Y2R2 807 aa20.45■□□□□ 0.86
PUDP-206ENST00000540122 PTPN12Q05209 780 aaKnown RBP20.44■□□□□ 0.86
PUDP-206ENST00000540122 TCIRG1Q13488 830 aa20.44■□□□□ 0.86
PUDP-206ENST00000540122 ZNF428Q96B54 188 aa20.44■□□□□ 0.86
PUDP-206ENST00000540122 KIAA0100Q14667 2235 aaKnown RBP20.43■□□□□ 0.86
PUDP-206ENST00000540122 G3V3G9 751 aa20.43■□□□□ 0.86
PUDP-206ENST00000540122 SF3B3Q15393 1217 aaKnown RBP20.43■□□□□ 0.86
PUDP-206ENST00000540122 DCAF8Q5TAQ9 597 aa20.43■□□□□ 0.86
PUDP-206ENST00000540122 SPRYD7Q5W111 196 aa20.43■□□□□ 0.86
PUDP-206ENST00000540122 SLC17A8Q8NDX2 589 aa20.43■□□□□ 0.86
PUDP-206ENST00000540122 OTUD5Q96G74 571 aa20.43■□□□□ 0.86
PUDP-206ENST00000540122 H0YGN5 161 aa20.42■□□□□ 0.86
PUDP-206ENST00000540122 EIF2S2P20042 333 aaKnown RBP20.42■□□□□ 0.86
PUDP-206ENST00000540122 NF2P35240 595 aa20.42■□□□□ 0.86
PUDP-206ENST00000540122 COPS6Q7L5N1 327 aa20.42■□□□□ 0.86
PUDP-206ENST00000540122 TRIOBPQ9H2D6 2365 aa20.42■□□□□ 0.86
PUDP-206ENST00000540122 UFL1O94874 794 aa20.41■□□□□ 0.86
PUDP-206ENST00000540122 NBPF9Q3BBW0 867 aa20.41■□□□□ 0.86
PUDP-206ENST00000540122 IFNL1Q8IU54 200 aa20.41■□□□□ 0.86
PUDP-206ENST00000540122 ERO1AQ96HE7 468 aa20.41■□□□□ 0.86
PUDP-206ENST00000540122 PODXL2Q9NZ53 605 aa20.41■□□□□ 0.86
PUDP-206ENST00000540122 AIMP1Q12904 312 aaKnown RBP20.4■□□□□ 0.86
PUDP-206ENST00000540122 ARMC9Q7Z3E5 817 aa20.4■□□□□ 0.86
PUDP-206ENST00000540122 CD99L2Q8TCZ2 262 aa20.4■□□□□ 0.86
PUDP-206ENST00000540122 XAGE3Q8WTP9 111 aa20.4■□□□□ 0.86
PUDP-206ENST00000540122 MANSC4A6NHS7 340 aaPredicted RBP20.39■□□□□ 0.85
PUDP-206ENST00000540122 PRKG1Q13976 671 aa20.39■□□□□ 0.85
PUDP-206ENST00000540122 LDLRAD1Q5T700 205 aa20.39■□□□□ 0.85
PUDP-206ENST00000540122 TMEM106CQ9BVX2 250 aa20.39■□□□□ 0.85
PUDP-206ENST00000540122 INHBEP58166 350 aa20.38■□□□□ 0.85
PUDP-206ENST00000540122 RPS8P62241 208 aaKnown RBP20.38■□□□□ 0.85
PUDP-206ENST00000540122 CHRDL2Q6WN34 429 aa20.38■□□□□ 0.85
PUDP-206ENST00000540122 FAM89AQ96GI7 184 aa20.38■□□□□ 0.85
PUDP-206ENST00000540122 GGA1Q9UJY5 639 aa20.38■□□□□ 0.85
PUDP-206ENST00000540122 PSME4Q14997 1843 aa20.37■□□□□ 0.85
PUDP-206ENST00000540122 IGF2BP3O00425 579 aaKnown RBP eCLIP20.37■□□□□ 0.85
PUDP-206ENST00000540122 ZNF333Q96JL9 665 aa20.37■□□□□ 0.85
PUDP-206ENST00000540122 EFCC1Q9HA90 598 aa20.37■□□□□ 0.85
PUDP-206ENST00000540122 ANKIB1Q9P2G1 1089 aa20.37■□□□□ 0.85
PUDP-206ENST00000540122 CLSPNQ9HAW4 1339 aa20.36■□□□□ 0.85
PUDP-206ENST00000540122 DLG5Q8TDM6 1919 aa20.36■□□□□ 0.85
PUDP-206ENST00000540122 USP17L3A6NCW0 530 aa20.36■□□□□ 0.85
PUDP-206ENST00000540122 USP17L4A6NCW7 530 aa20.36■□□□□ 0.85
PUDP-206ENST00000540122 USP17L1Q7RTZ2 530 aa20.36■□□□□ 0.85
PUDP-206ENST00000540122 WNT10BO00744 389 aa20.35■□□□□ 0.85
PUDP-206ENST00000540122 CAP1Q01518 475 aa20.35■□□□□ 0.85
PUDP-206ENST00000540122 TSPYL4Q9UJ04 414 aa20.35■□□□□ 0.85
PUDP-206ENST00000540122 ANGEL1Q9UNK9 670 aaKnown RBP20.35■□□□□ 0.85
PUDP-206ENST00000540122 CRHR2Q13324 411 aa20.34■□□□□ 0.85
PUDP-206ENST00000540122 RBM27Q9P2N5 1060 aaKnown RBP20.34■□□□□ 0.85
PUDP-206ENST00000540122 RANBP2P49792 3224 aaKnown RBP20.34■□□□□ 0.85
PUDP-206ENST00000540122 RTL5Q5HYW3 569 aaPredicted RBP20.33■□□□□ 0.85
PUDP-206ENST00000540122 FZD1Q9UP38 647 aa20.33■□□□□ 0.85
PUDP-206ENST00000540122 CEP290O15078 2479 aa20.32■□□□□ 0.84
PUDP-206ENST00000540122 A0A0C4DFX4 3053 aa20.32■□□□□ 0.84
PUDP-206ENST00000540122 SASH1O94885 1247 aa20.32■□□□□ 0.84
PUDP-206ENST00000540122 NEFMP07197 916 aa20.32■□□□□ 0.84
PUDP-206ENST00000540122 ZBTB48P10074 688 aaPredicted RBP20.32■□□□□ 0.84
PUDP-206ENST00000540122 NFE2L2Q16236 605 aa20.32■□□□□ 0.84
PUDP-206ENST00000540122 PODNQ7Z5L7 613 aa20.32■□□□□ 0.84
PUDP-206ENST00000540122 SLC10A4Q96EP9 437 aa20.32■□□□□ 0.84
PUDP-206ENST00000540122 WNK4Q96J92 1243 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms