RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 DICER1Q9UPY3 1922 aaKnown RBP11.74□□□□□ -0.53
CHKA-207ENST00000533728 NEURL1BA8MQ27 555 aa11.73□□□□□ -0.53
CHKA-207ENST00000533728 MYH3P11055 1940 aa11.73□□□□□ -0.53
CHKA-207ENST00000533728 NUCB2P80303 420 aa11.73□□□□□ -0.53
CHKA-207ENST00000533728 ANKRD13DQ6ZTN6 518 aa11.73□□□□□ -0.53
CHKA-207ENST00000533728 TICAM2Q86XR7 235 aa11.73□□□□□ -0.53
CHKA-207ENST00000533728 PRAMEF22A3QJZ6 481 aa11.72□□□□□ -0.53
CHKA-207ENST00000533728 IGKV5-2P06315 115 aa11.72□□□□□ -0.53
CHKA-207ENST00000533728 HSP90AA1P07900 732 aaKnown RBP11.72□□□□□ -0.53
CHKA-207ENST00000533728 MAP2K2P36507 400 aa11.72□□□□□ -0.53
CHKA-207ENST00000533728 SLC39A6Q13433 755 aa11.72□□□□□ -0.53
CHKA-207ENST00000533728 GCKRQ14397 625 aa11.72□□□□□ -0.53
CHKA-207ENST00000533728 PLBD2Q8NHP8 589 aa11.72□□□□□ -0.53
CHKA-207ENST00000533728 XAGE3Q8WTP9 111 aa11.72□□□□□ -0.53
CHKA-207ENST00000533728 RUFY2Q8WXA3 655 aa11.72□□□□□ -0.53
CHKA-207ENST00000533728 COLQQ9Y215 455 aaPredicted RBP11.72□□□□□ -0.53
CHKA-207ENST00000533728 VCANP13611 3396 aa11.72□□□□□ -0.53
CHKA-207ENST00000533728 MYH14Q7Z406 1995 aaKnown RBP11.72□□□□□ -0.53
CHKA-207ENST00000533728 SCN4AP35499 1836 aa11.72□□□□□ -0.53
CHKA-207ENST00000533728 C4AP0C0L4 1744 aa11.72□□□□□ -0.53
CHKA-207ENST00000533728 TRIM6-TRIM34B2RNG4 842 aa11.71□□□□□ -0.53
CHKA-207ENST00000533728 HIP1O00291 1037 aa11.71□□□□□ -0.53
CHKA-207ENST00000533728 CD2BP2O95400 341 aaKnown RBP11.71□□□□□ -0.53
CHKA-207ENST00000533728 SSFA2P28290 1259 aa11.71□□□□□ -0.53
CHKA-207ENST00000533728 SKOR2Q2VWA4 1001 aaPredicted RBP11.71□□□□□ -0.53
CHKA-207ENST00000533728 RABL6Q3YEC7 729 aaPredicted RBP11.71□□□□□ -0.53
CHKA-207ENST00000533728 COPS6Q7L5N1 327 aa11.71□□□□□ -0.53
CHKA-207ENST00000533728 KAZALD1Q96I82 304 aa11.71□□□□□ -0.53
CHKA-207ENST00000533728 SUCLG2Q96I99 432 aa11.71□□□□□ -0.53
CHKA-207ENST00000533728 COL25A1Q9BXS0 654 aaPredicted RBP11.71□□□□□ -0.53
CHKA-207ENST00000533728 IL1RAPL2Q9NP60 686 aa11.71□□□□□ -0.53
CHKA-207ENST00000533728 COPRSQ9NQ92 184 aa11.71□□□□□ -0.53
CHKA-207ENST00000533728 ECHDC1Q9NTX5 307 aa11.71□□□□□ -0.53
CHKA-207ENST00000533728 ISY1Q9ULR0 285 aaKnown RBP11.71□□□□□ -0.53
CHKA-207ENST00000533728 RFX7Q2KHR2 1363 aa11.7□□□□□ -0.54
CHKA-207ENST00000533728 RAD50Q92878 1312 aa11.7□□□□□ -0.54
CHKA-207ENST00000533728 SGSM2O43147 1006 aa11.7□□□□□ -0.54
CHKA-207ENST00000533728 AOC2O75106 756 aa11.7□□□□□ -0.54
CHKA-207ENST00000533728 G3BP1Q13283 466 aaKnown RBP eCLIP11.7□□□□□ -0.542e-6■■■■□ 23.6
CHKA-207ENST00000533728 OS9Q13438 667 aaPredicted RBP11.7□□□□□ -0.54
CHKA-207ENST00000533728 CWF19L2Q2TBE0 894 aaKnown RBP11.7□□□□□ -0.54
CHKA-207ENST00000533728 RILPL2Q969X0 211 aa11.7□□□□□ -0.54
CHKA-207ENST00000533728 IFIT2P09913 472 aaKnown RBP11.69□□□□□ -0.54
CHKA-207ENST00000533728 HSPA4P34932 840 aa11.69□□□□□ -0.54
CHKA-207ENST00000533728 NUTM1Q86Y26 1132 aa11.69□□□□□ -0.54
CHKA-207ENST00000533728 VSIG10Q8N0Z9 540 aa11.69□□□□□ -0.54
CHKA-207ENST00000533728 EVI5LQ96CN4 794 aa11.69□□□□□ -0.54
CHKA-207ENST00000533728 INTS4Q96HW7 963 aaKnown RBP11.69□□□□□ -0.54
CHKA-207ENST00000533728 RBM42Q9BTD8 480 aaKnown RBP11.69□□□□□ -0.54
CHKA-207ENST00000533728 TEX13AQ9BXU3 409 aaPredicted RBP11.69□□□□□ -0.54
CHKA-207ENST00000533728 BICC1Q9H694 974 aaKnown RBP11.69□□□□□ -0.54
CHKA-207ENST00000533728 SNRKQ9NRH2 765 aa11.69□□□□□ -0.54
CHKA-207ENST00000533728 USP16Q9Y5T5 823 aa11.69□□□□□ -0.54
CHKA-207ENST00000533728 TTC28Q96AY4 2481 aa11.69□□□□□ -0.54
CHKA-207ENST00000533728 BRCA2P51587 3418 aa11.69□□□□□ -0.54
CHKA-207ENST00000533728 NUP98P52948 1817 aa11.68□□□□□ -0.54
CHKA-207ENST00000533728 CYP2E1P05181 493 aaPredicted RBP11.68□□□□□ -0.54
CHKA-207ENST00000533728 CUL4AQ13619 759 aa11.68□□□□□ -0.54
CHKA-207ENST00000533728 L1TD1Q5T7N2 865 aaKnown RBP11.68□□□□□ -0.54
CHKA-207ENST00000533728 PIGBQ92521 554 aa11.68□□□□□ -0.54
CHKA-207ENST00000533728 TNPO1Q92973 898 aaKnown RBP11.68□□□□□ -0.54
CHKA-207ENST00000533728 MYH7P12883 1935 aa11.68□□□□□ -0.54
CHKA-207ENST00000533728 KIAA0100Q14667 2235 aaKnown RBP11.67□□□□□ -0.54
CHKA-207ENST00000533728 IQCA1LA6NCM1 817 aa11.67□□□□□ -0.54
CHKA-207ENST00000533728 GOLGA6L22H0YM25 854 aa11.67□□□□□ -0.54
CHKA-207ENST00000533728 CASP7P55210 303 aa11.67□□□□□ -0.54
CHKA-207ENST00000533728 AIMP1Q12904 312 aaKnown RBP11.67□□□□□ -0.54
CHKA-207ENST00000533728 SPRYD3Q8NCJ5 442 aa11.67□□□□□ -0.54
CHKA-207ENST00000533728 SMARCC1Q92922 1105 aaPredicted RBP11.67□□□□□ -0.54
CHKA-207ENST00000533728 KCNB2Q92953 911 aa11.67□□□□□ -0.54
CHKA-207ENST00000533728 MYD88Q99836 296 aa11.67□□□□□ -0.54
CHKA-207ENST00000533728 ANO2Q9NQ90 1003 aa11.67□□□□□ -0.54
CHKA-207ENST00000533728 PRDM6Q9NQX0 595 aa11.67□□□□□ -0.54
CHKA-207ENST00000533728 HPS5Q9UPZ3 1129 aa11.67□□□□□ -0.54
CHKA-207ENST00000533728 CLEC11AQ9Y240 323 aa11.67□□□□□ -0.54
CHKA-207ENST00000533728 TRPM7Q96QT4 1865 aa11.67□□□□□ -0.54
CHKA-207ENST00000533728 H7C1W4 665 aa11.66□□□□□ -0.54
CHKA-207ENST00000533728 SASH1O94885 1247 aa11.66□□□□□ -0.54
CHKA-207ENST00000533728 MYL6BP14649 208 aa11.66□□□□□ -0.54
CHKA-207ENST00000533728 RFX5P48382 616 aaPredicted RBP11.66□□□□□ -0.54
CHKA-207ENST00000533728 EAPPQ56P03 285 aaPredicted RBP11.66□□□□□ -0.54
CHKA-207ENST00000533728 TSHZ3Q63HK5 1081 aa11.66□□□□□ -0.54
CHKA-207ENST00000533728 KIAA1211Q6ZU35 1233 aa11.66□□□□□ -0.54
CHKA-207ENST00000533728 CCDC191Q8NCU4 936 aa11.66□□□□□ -0.54
CHKA-207ENST00000533728 GPR108Q9NPR9 543 aa11.66□□□□□ -0.54
CHKA-207ENST00000533728 ATG3Q9NT62 314 aa11.66□□□□□ -0.54
CHKA-207ENST00000533728 TMOD3Q9NYL9 352 aa11.66□□□□□ -0.54
CHKA-207ENST00000533728 ADAMTSL1Q8N6G6 1762 aa11.65□□□□□ -0.54
CHKA-207ENST00000533728 TRAK2O60296 914 aa11.65□□□□□ -0.54
CHKA-207ENST00000533728 DDNO94850 711 aaPredicted RBP11.65□□□□□ -0.54
CHKA-207ENST00000533728 TRIM28Q13263 835 aaKnown RBP11.65□□□□□ -0.54
CHKA-207ENST00000533728 AACSQ86V21 672 aa11.65□□□□□ -0.54
CHKA-207ENST00000533728 TM6SF1Q9BZW5 370 aa11.65□□□□□ -0.54
CHKA-207ENST00000533728 LSG1Q9H089 658 aaKnown RBP11.65□□□□□ -0.54
CHKA-207ENST00000533728 TAF1DQ9H5J8 278 aaPredicted RBP11.65□□□□□ -0.54
CHKA-207ENST00000533728 FBXO3Q9UK99 471 aa11.65□□□□□ -0.54
CHKA-207ENST00000533728 NBPF26B4DH59 902 aa11.64□□□□□ -0.55
CHKA-207ENST00000533728 CHRNA5P30532 468 aa11.64□□□□□ -0.55
CHKA-207ENST00000533728 NEK4P51957 841 aa11.64□□□□□ -0.55
CHKA-207ENST00000533728 NBPF10Q6P3W6 841 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms