RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 TRIP4Q15650 581 aaPredicted RBP6.84□□□□□ -1.31
ATM-217ENST00000531957 GRIK5Q16478 980 aa6.84□□□□□ -1.31
ATM-217ENST00000531957 C14orf37Q86TY3 774 aa6.84□□□□□ -1.31
ATM-217ENST00000531957 TRPM4Q8TD43 1214 aa6.84□□□□□ -1.31
ATM-217ENST00000531957 SRA1Q9HD15 236 aaKnown RBP6.84□□□□□ -1.31
ATM-217ENST00000531957 SEPT3Q9UH03 358 aa6.84□□□□□ -1.31
ATM-217ENST00000531957 BRD2P25440 801 aaKnown RBP6.83□□□□□ -1.32
ATM-217ENST00000531957 NOS3P29474 1203 aa6.83□□□□□ -1.32
ATM-217ENST00000531957 PERM1Q5SV97 790 aa6.83□□□□□ -1.32
ATM-217ENST00000531957 SLC51AQ86UW1 340 aa6.83□□□□□ -1.32
ATM-217ENST00000531957 COL26A1Q96A83 441 aa6.83□□□□□ -1.32
ATM-217ENST00000531957 PTCD1O75127 700 aaKnown RBP6.82□□□□□ -1.32
ATM-217ENST00000531957 NRLP54845 237 aa6.82□□□□□ -1.32
ATM-217ENST00000531957 PRR23CQ6ZRP0 262 aa6.82□□□□□ -1.32
ATM-217ENST00000531957 CARNS1A5YM72 827 aa6.81□□□□□ -1.32
ATM-217ENST00000531957 ZBTB39O15060 712 aa6.81□□□□□ -1.32
ATM-217ENST00000531957 MMP20O60882 483 aa6.81□□□□□ -1.32
ATM-217ENST00000531957 EGFRP00533 1210 aa6.81□□□□□ -1.32
ATM-217ENST00000531957 EIF2AK2P19525 551 aaKnown RBP6.81□□□□□ -1.32
ATM-217ENST00000531957 ZAP70P43403 619 aa6.81□□□□□ -1.32
ATM-217ENST00000531957 MEGF10Q96KG7 1140 aa6.81□□□□□ -1.32
ATM-217ENST00000531957 NSUN5Q96P11 429 aaKnown RBP6.81□□□□□ -1.32
ATM-217ENST00000531957 MRPL18Q9H0U6 180 aaKnown RBP6.81□□□□□ -1.32
ATM-217ENST00000531957 BTBD11A6QL63 1104 aa6.8□□□□□ -1.32
ATM-217ENST00000531957 J3QW42 95 aa6.8□□□□□ -1.32
ATM-217ENST00000531957 MCTP1Q6DN14 999 aa6.8□□□□□ -1.32
ATM-217ENST00000531957 MAP4K3Q8IVH8 894 aa6.8□□□□□ -1.32
ATM-217ENST00000531957 GPR152Q8TDT2 470 aa6.8□□□□□ -1.32
ATM-217ENST00000531957 SMG9Q9H0W8 520 aaKnown RBP6.8□□□□□ -1.32
ATM-217ENST00000531957 AKTIPQ9H8T0 292 aa6.8□□□□□ -1.32
ATM-217ENST00000531957 PCMTD2Q9NV79 361 aa6.8□□□□□ -1.32
ATM-217ENST00000531957 TLR7Q9NYK1 1049 aaKnown RBP6.8□□□□□ -1.32
ATM-217ENST00000531957 STIM2Q9P246 746 aa6.8□□□□□ -1.32
ATM-217ENST00000531957 UBAP1LF5GYI3 381 aa6.79□□□□□ -1.32
ATM-217ENST00000531957 DLL1O00548 723 aa6.79□□□□□ -1.32
ATM-217ENST00000531957 ATCAYQ86WG3 371 aa6.79□□□□□ -1.32
ATM-217ENST00000531957 RBSNQ9H1K0 784 aa6.79□□□□□ -1.32
ATM-217ENST00000531957 TMEM88BA6NKF7 163 aa6.78□□□□□ -1.32
ATM-217ENST00000531957 GSC2O15499 205 aa6.78□□□□□ -1.32
ATM-217ENST00000531957 DEAF1O75398 565 aaPredicted RBP6.78□□□□□ -1.32
ATM-217ENST00000531957 PSAPP07602 524 aa6.78□□□□□ -1.32
ATM-217ENST00000531957 FSTP19883 344 aa6.78□□□□□ -1.32
ATM-217ENST00000531957 DZIP1LQ8IYY4 767 aaKnown RBP6.78□□□□□ -1.32
ATM-217ENST00000531957 PIK3R5Q8WYR1 880 aa6.78□□□□□ -1.32
ATM-217ENST00000531957 GOLGA2P5Q9HBQ8 144 aa6.78□□□□□ -1.32
ATM-217ENST00000531957 GHRHP01286 108 aa6.77□□□□□ -1.33
ATM-217ENST00000531957 NLRP13Q86W25 1043 aa6.77□□□□□ -1.33
ATM-217ENST00000531957 CACTIN-AS1Q8N1I8 211 aa6.77□□□□□ -1.33
ATM-217ENST00000531957 TMEM130Q8N3G9 435 aa6.77□□□□□ -1.33
ATM-217ENST00000531957 PLD4Q96BZ4 506 aa6.77□□□□□ -1.33
ATM-217ENST00000531957 LOC102724428A0A0B4J2F2 783 aa6.76□□□□□ -1.33
ATM-217ENST00000531957 PAX4O43316 350 aa6.76□□□□□ -1.33
ATM-217ENST00000531957 SOX18P35713 384 aa6.76□□□□□ -1.33
ATM-217ENST00000531957 SIK1P57059 783 aa6.76□□□□□ -1.33
ATM-217ENST00000531957 MTMR3Q13615 1198 aa6.76□□□□□ -1.33
ATM-217ENST00000531957 ABTB2Q8N961 1025 aa6.76□□□□□ -1.33
ATM-217ENST00000531957 F8W735 103 aaPredicted RBP6.75□□□□□ -1.33
ATM-217ENST00000531957 HOXD8P13378 290 aaPredicted RBP6.75□□□□□ -1.33
ATM-217ENST00000531957 COL13A1Q5TAT6 717 aaPredicted RBP6.75□□□□□ -1.33
ATM-217ENST00000531957 GDF6Q6KF10 455 aaPredicted RBP6.75□□□□□ -1.33
ATM-217ENST00000531957 Q6ZS46 218 aa6.75□□□□□ -1.33
ATM-217ENST00000531957 HELQQ8TDG4 1101 aa6.75□□□□□ -1.33
ATM-217ENST00000531957 NUDT16Q96DE0 195 aaKnown RBP6.75□□□□□ -1.33
ATM-217ENST00000531957 MUC3BQ9H195 1237 aa6.75□□□□□ -1.33
ATM-217ENST00000531957 FAM13BQ9NYF5 915 aa6.75□□□□□ -1.33
ATM-217ENST00000531957 PPP1R15AO75807 674 aaPredicted RBP6.74□□□□□ -1.33
ATM-217ENST00000531957 SSFA2P28290 1259 aa6.74□□□□□ -1.33
ATM-217ENST00000531957 GTF3C2Q8WUA4 911 aaPredicted RBP6.74□□□□□ -1.33
ATM-217ENST00000531957 A6NHS1 94 aa6.73□□□□□ -1.33
ATM-217ENST00000531957 CYP2E1P05181 493 aaPredicted RBP6.73□□□□□ -1.33
ATM-217ENST00000531957 MPSTP25325 297 aa6.73□□□□□ -1.33
ATM-217ENST00000531957 CD97P48960 835 aa6.73□□□□□ -1.33
ATM-217ENST00000531957 ATP11AP98196 1134 aa6.73□□□□□ -1.33
ATM-217ENST00000531957 DNM1Q05193 864 aaKnown RBP6.73□□□□□ -1.33
ATM-217ENST00000531957 OR13H1Q8NG92 308 aa6.73□□□□□ -1.33
ATM-217ENST00000531957 EDEM1Q92611 657 aa6.73□□□□□ -1.33
ATM-217ENST00000531957 TMEM63CQ9P1W3 806 aa6.73□□□□□ -1.33
ATM-217ENST00000531957 TRIM33Q9UPN9 1127 aa6.73□□□□□ -1.33
ATM-217ENST00000531957 COL17A1Q9UMD9 1497 aaPredicted RBP6.73□□□□□ -1.33
ATM-217ENST00000531957 GLB1P16278 677 aa6.72□□□□□ -1.33
ATM-217ENST00000531957 KRTAP19-1Q8IUB9 90 aa6.72□□□□□ -1.33
ATM-217ENST00000531957 IL22RA1Q8N6P7 574 aa6.72□□□□□ -1.33
ATM-217ENST00000531957 ARID3AQ99856 593 aa6.72□□□□□ -1.33
ATM-217ENST00000531957 ABI2Q9NYB9 513 aaPredicted RBP6.72□□□□□ -1.33
ATM-217ENST00000531957 FNDC3AQ9Y2H6 1198 aaKnown RBP6.72□□□□□ -1.33
ATM-217ENST00000531957 RAXQ9Y2V3 346 aa6.72□□□□□ -1.33
ATM-217ENST00000531957 SSTR4P31391 388 aa6.71□□□□□ -1.34
ATM-217ENST00000531957 TXKP42681 527 aa6.71□□□□□ -1.34
ATM-217ENST00000531957 EIF1AXP47813 144 aaKnown RBP6.71□□□□□ -1.34
ATM-217ENST00000531957 IRAK1P51617 712 aa6.71□□□□□ -1.34
ATM-217ENST00000531957 UVSSAQ2YD98 709 aa6.71□□□□□ -1.34
ATM-217ENST00000531957 TTC39BQ5VTQ0 682 aaPredicted RBP6.71□□□□□ -1.34
ATM-217ENST00000531957 PHLDB3Q6NSJ2 640 aa6.71□□□□□ -1.34
ATM-217ENST00000531957 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.71□□□□□ -1.34
ATM-217ENST00000531957 ZNF438Q7Z4V0 828 aa6.71□□□□□ -1.34
ATM-217ENST00000531957 CEP41Q9BYV8 373 aa6.71□□□□□ -1.34
ATM-217ENST00000531957 KANSL3Q9P2N6 904 aa6.71□□□□□ -1.34
ATM-217ENST00000531957 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.71□□□□□ -1.34
ATM-217ENST00000531957 KIAA1324LA8MWY0 1029 aaPredicted RBP6.7□□□□□ -1.34
ATM-217ENST00000531957 COBLO75128 1261 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms