RNA–Protein interactions for RNA: ENST00000529521.1

FDFT1-216, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 418 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-216ENST00000529521 MAP2K1Q02750 393 aaPredicted RBP3.49□□□□□ -1.85
FDFT1-216ENST00000529521 TRIM28Q13263 835 aaKnown RBP3.49□□□□□ -1.85
FDFT1-216ENST00000529521 FZD5Q13467 585 aa3.49□□□□□ -1.85
FDFT1-216ENST00000529521 ADGRE1Q14246 886 aa3.49□□□□□ -1.85
FDFT1-216ENST00000529521 MBTPS1Q14703 1052 aa3.49□□□□□ -1.85
FDFT1-216ENST00000529521 UVSSAQ2YD98 709 aa3.49□□□□□ -1.85
FDFT1-216ENST00000529521 ELOA3BQ3SY89 546 aa3.49□□□□□ -1.85
FDFT1-216ENST00000529521 C4orf46Q504U0 113 aa3.49□□□□□ -1.85
FDFT1-216ENST00000529521 CCDC184Q52MB2 194 aa3.49□□□□□ -1.85
FDFT1-216ENST00000529521 TAF3Q5VWG9 929 aa3.49□□□□□ -1.85
FDFT1-216ENST00000529521 TBC1D9Q6ZT07 1266 aa3.49□□□□□ -1.85
FDFT1-216ENST00000529521 DPH6Q7L8W6 267 aa3.49□□□□□ -1.85
FDFT1-216ENST00000529521 TXNDC2Q86VQ3 553 aa3.49□□□□□ -1.85
FDFT1-216ENST00000529521 LARGE2Q8N3Y3 721 aa3.49□□□□□ -1.85
FDFT1-216ENST00000529521 ELOA3Q8NG57 546 aa3.49□□□□□ -1.85
FDFT1-216ENST00000529521 PNISRQ8TF01 805 aaKnown RBP3.49□□□□□ -1.85
FDFT1-216ENST00000529521 SENP7Q9BQF6 1050 aa3.49□□□□□ -1.85
FDFT1-216ENST00000529521 ESF1Q9H501 851 aaKnown RBP3.49□□□□□ -1.85
FDFT1-216ENST00000529521 PRR12Q9ULL5 1215 aa3.49□□□□□ -1.85
FDFT1-216ENST00000529521 SYNPO2Q9UMS6 1093 aa3.49□□□□□ -1.85
FDFT1-216ENST00000529521 IVNS1ABPQ9Y6Y0 642 aa3.49□□□□□ -1.85
FDFT1-216ENST00000529521 VGLL3A8MV65 326 aa3.48□□□□□ -1.85
FDFT1-216ENST00000529521 C9orf172C9J069 976 aa3.48□□□□□ -1.85
FDFT1-216ENST00000529521 M0R082 166 aa3.48□□□□□ -1.85
FDFT1-216ENST00000529521 PLA2G4AP47712 749 aa3.48□□□□□ -1.85
FDFT1-216ENST00000529521 TDO2P48775 406 aa3.48□□□□□ -1.85
FDFT1-216ENST00000529521 IGBP1P78318 339 aa3.48□□□□□ -1.85
FDFT1-216ENST00000529521 PSME1Q06323 249 aa3.48□□□□□ -1.85
FDFT1-216ENST00000529521 SLC20A2Q08357 652 aa3.48□□□□□ -1.85
FDFT1-216ENST00000529521 VAC14Q08AM6 782 aa3.48□□□□□ -1.85
FDFT1-216ENST00000529521 NEXNQ0ZGT2 675 aa3.48□□□□□ -1.85
FDFT1-216ENST00000529521 ICE2Q659A1 982 aa3.48□□□□□ -1.85
FDFT1-216ENST00000529521 C8orf86Q6ZUL3 223 aa3.48□□□□□ -1.85
FDFT1-216ENST00000529521 NGEFQ8N5V2 710 aa3.48□□□□□ -1.85
FDFT1-216ENST00000529521 ZNF417Q8TAU3 575 aa3.48□□□□□ -1.85
FDFT1-216ENST00000529521 CALR3Q96L12 384 aaKnown RBP3.48□□□□□ -1.85
FDFT1-216ENST00000529521 ZNF587Q96SQ5 575 aaPredicted RBP3.48□□□□□ -1.85
FDFT1-216ENST00000529521 PRDM6Q9NQX0 595 aa3.48□□□□□ -1.85
FDFT1-216ENST00000529521 STRN4Q9NRL3 753 aa3.48□□□□□ -1.85
FDFT1-216ENST00000529521 GEMIN8Q9NWZ8 242 aaKnown RBP3.48□□□□□ -1.85
FDFT1-216ENST00000529521 CHPF2Q9P2E5 772 aa3.48□□□□□ -1.85
FDFT1-216ENST00000529521 GABBR1Q9UBS5 961 aa3.48□□□□□ -1.85
FDFT1-216ENST00000529521 WWC3Q9ULE0 1092 aa3.48□□□□□ -1.85
FDFT1-216ENST00000529521 TPX2Q9ULW0 747 aaKnown RBP3.48□□□□□ -1.85
FDFT1-216ENST00000529521 RNF112Q9ULX5 631 aa3.48□□□□□ -1.85
FDFT1-216ENST00000529521 STARD13Q9Y3M8 1113 aa3.48□□□□□ -1.85
FDFT1-216ENST00000529521 UNC13AQ9UPW8 1703 aa3.47□□□□□ -1.85
FDFT1-216ENST00000529521 SYNRGQ9UMZ2 1314 aa3.47□□□□□ -1.85
FDFT1-216ENST00000529521 A0A1W2PNR3 127 aa3.47□□□□□ -1.85
FDFT1-216ENST00000529521 STAU1O95793 577 aaKnown RBP3.47□□□□□ -1.85
FDFT1-216ENST00000529521 ALBP02768 609 aa3.47□□□□□ -1.85
FDFT1-216ENST00000529521 NID1P14543 1247 aa3.47□□□□□ -1.85
FDFT1-216ENST00000529521 ALAS2P22557 587 aa3.47□□□□□ -1.85
FDFT1-216ENST00000529521 ZC3H6P61129 1189 aaKnown RBP3.47□□□□□ -1.85
FDFT1-216ENST00000529521 EIF4G2P78344 907 aaKnown RBP eCLIP3.47□□□□□ -1.85
FDFT1-216ENST00000529521 SATB1Q01826 763 aa3.47□□□□□ -1.85
FDFT1-216ENST00000529521 SF3B2Q13435 895 aaKnown RBP3.47□□□□□ -1.85
FDFT1-216ENST00000529521 PTPROQ16827 1216 aa3.47□□□□□ -1.85
FDFT1-216ENST00000529521 NAALADL2Q58DX5 795 aa3.47□□□□□ -1.85
FDFT1-216ENST00000529521 UTP14CQ5TAP6 766 aaKnown RBP3.47□□□□□ -1.85
FDFT1-216ENST00000529521 HDGFL1Q5TGJ6 251 aa3.47□□□□□ -1.85
FDFT1-216ENST00000529521 TXNRD3Q86VQ6 643 aa3.47□□□□□ -1.85
FDFT1-216ENST00000529521 SMAP1Q8IYB5 467 aaPredicted RBP3.47□□□□□ -1.85
FDFT1-216ENST00000529521 FAM43AQ8N2R8 423 aa3.47□□□□□ -1.85
FDFT1-216ENST00000529521 C1orf216Q8TAB5 229 aa3.47□□□□□ -1.85
FDFT1-216ENST00000529521 TP53INP1Q96A56 240 aa3.47□□□□□ -1.85
FDFT1-216ENST00000529521 SCYL1Q96KG9 808 aa3.47□□□□□ -1.85
FDFT1-216ENST00000529521 SSBP4Q9BWG4 385 aaPredicted RBP3.47□□□□□ -1.85
FDFT1-216ENST00000529521 TMX4Q9H1E5 349 aaPredicted RBP3.47□□□□□ -1.85
FDFT1-216ENST00000529521 SWAP70Q9UH65 585 aa3.47□□□□□ -1.85
FDFT1-216ENST00000529521 MRVI1Q9Y6F6 885 aa3.47□□□□□ -1.85
FDFT1-216ENST00000529521 hCG_2014768A0A024R1R8 64 aa3.46□□□□□ -1.86
FDFT1-216ENST00000529521 TLDC2A0PJX2 215 aa3.46□□□□□ -1.86
FDFT1-216ENST00000529521 POM121CA8CG34 1229 aa3.46□□□□□ -1.86
FDFT1-216ENST00000529521 ADARB2-AS1A8MUL3 147 aa3.46□□□□□ -1.86
FDFT1-216ENST00000529521 EFSO43281 561 aa3.46□□□□□ -1.86
FDFT1-216ENST00000529521 HSP90AA1P07900 732 aaKnown RBP3.46□□□□□ -1.86
FDFT1-216ENST00000529521 CT47B1P0C2W7 299 aaPredicted RBP3.46□□□□□ -1.86
FDFT1-216ENST00000529521 FAM157BP0CG42 384 aa3.46□□□□□ -1.86
FDFT1-216ENST00000529521 HDLBPQ00341 1268 aaKnown RBP3.46□□□□□ -1.86
FDFT1-216ENST00000529521 NR1H3Q13133 447 aa3.46□□□□□ -1.86
FDFT1-216ENST00000529521 TLR1Q15399 786 aa3.46□□□□□ -1.86
FDFT1-216ENST00000529521 SF3A1Q15459 793 aaKnown RBP3.46□□□□□ -1.86
FDFT1-216ENST00000529521 HSP90AB2PQ58FF8 381 aa3.46□□□□□ -1.86
FDFT1-216ENST00000529521 ESCO1Q5FWF5 840 aa3.46□□□□□ -1.86
FDFT1-216ENST00000529521 EGFLAMQ63HQ2 1017 aa3.46□□□□□ -1.86
FDFT1-216ENST00000529521 SYT9Q86SS6 491 aa3.46□□□□□ -1.86
FDFT1-216ENST00000529521 NOP9Q86U38 636 aaKnown RBP3.46□□□□□ -1.86
FDFT1-216ENST00000529521 RPAINQ86UA6 219 aa3.46□□□□□ -1.86
FDFT1-216ENST00000529521 MICALL1Q8N3F8 863 aa3.46□□□□□ -1.86
FDFT1-216ENST00000529521 SPACA7Q96KW9 195 aa3.46□□□□□ -1.86
FDFT1-216ENST00000529521 ETNK1Q9HBU6 452 aa3.46□□□□□ -1.86
FDFT1-216ENST00000529521 RBM28Q9NW13 759 aaKnown RBP3.46□□□□□ -1.86
FDFT1-216ENST00000529521 MARK1Q9P0L2 795 aa3.46□□□□□ -1.86
FDFT1-216ENST00000529521 ABCF2Q9UG63 623 aa3.46□□□□□ -1.86
FDFT1-216ENST00000529521 PUF60Q9UHX1 559 aaKnown RBP3.46□□□□□ -1.86
FDFT1-216ENST00000529521 CTDP1Q9Y5B0 961 aaPredicted RBP3.46□□□□□ -1.86
FDFT1-216ENST00000529521 RB1CC1Q8TDY2 1594 aa3.46□□□□□ -1.86
FDFT1-216ENST00000529521 CCDC189A1A4V9 331 aa3.45□□□□□ -1.86
FDFT1-216ENST00000529521 CARNS1A5YM72 827 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms