RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 ERFEQ4G0M1 354 aa13.94□□□□□ -0.18
CCDC84-205ENST00000528088 OLFM4Q6UX06 510 aa13.94□□□□□ -0.18
CCDC84-205ENST00000528088 CNKSR1Q969H4 720 aa13.94□□□□□ -0.18
CCDC84-205ENST00000528088 OCEL1Q9H607 264 aa13.94□□□□□ -0.18
CCDC84-205ENST00000528088 CWC25Q9NXE8 425 aaPredicted RBP13.94□□□□□ -0.18
CCDC84-205ENST00000528088 SLX4Q8IY92 1834 aa13.94□□□□□ -0.18
CCDC84-205ENST00000528088 CACNA1SQ13698 1873 aa13.94□□□□□ -0.18
CCDC84-205ENST00000528088 ATMINO43313 823 aaPredicted RBP13.93□□□□□ -0.18
CCDC84-205ENST00000528088 C7orf43Q8WVR3 580 aa13.93□□□□□ -0.18
CCDC84-205ENST00000528088 ISCA1Q9BUE6 129 aa13.93□□□□□ -0.18
CCDC84-205ENST00000528088 NOB1Q9ULX3 412 aaKnown RBP13.93□□□□□ -0.18
CCDC84-205ENST00000528088 IBTKQ9P2D0 1353 aaPredicted RBP13.93□□□□□ -0.18
CCDC84-205ENST00000528088 BCAR3O75815 825 aa13.93□□□□□ -0.18
CCDC84-205ENST00000528088 NTSR2O95665 410 aa13.93□□□□□ -0.18
CCDC84-205ENST00000528088 NPR1P16066 1061 aa13.93□□□□□ -0.18
CCDC84-205ENST00000528088 CWF19L2Q2TBE0 894 aaKnown RBP13.93□□□□□ -0.18
CCDC84-205ENST00000528088 CCDC191Q8NCU4 936 aa13.93□□□□□ -0.18
CCDC84-205ENST00000528088 KDM4CQ9H3R0 1056 aa13.93□□□□□ -0.18
CCDC84-205ENST00000528088 RRAGCQ9HB90 399 aa13.93□□□□□ -0.18
CCDC84-205ENST00000528088 SH3TC1Q8TE82 1336 aa13.92□□□□□ -0.18
CCDC84-205ENST00000528088 IPO8O15397 1037 aaKnown RBP13.92□□□□□ -0.18
CCDC84-205ENST00000528088 C3orf67Q6ZVT6 689 aa13.92□□□□□ -0.18
CCDC84-205ENST00000528088 SLC51AQ86UW1 340 aa13.92□□□□□ -0.18
CCDC84-205ENST00000528088 FAM89AQ96GI7 184 aa13.92□□□□□ -0.18
CCDC84-205ENST00000528088 API5Q9BZZ5 524 aaKnown RBP13.92□□□□□ -0.18
CCDC84-205ENST00000528088 TNRC6CQ9HCJ0 1690 aaKnown RBP13.91□□□□□ -0.18
CCDC84-205ENST00000528088 NEURL1BA8MQ27 555 aa13.91□□□□□ -0.18
CCDC84-205ENST00000528088 PDE4DQ08499 809 aa13.91□□□□□ -0.18
CCDC84-205ENST00000528088 ASTLQ6HA08 431 aaPredicted RBP13.91□□□□□ -0.18
CCDC84-205ENST00000528088 LINS1Q8NG48 757 aa13.91□□□□□ -0.18
CCDC84-205ENST00000528088 RNF123Q5XPI4 1314 aa13.91□□□□□ -0.18
CCDC84-205ENST00000528088 IGKV5-2P06315 115 aa13.9□□□□□ -0.18
CCDC84-205ENST00000528088 HCLS1P14317 486 aaPredicted RBP13.9□□□□□ -0.18
CCDC84-205ENST00000528088 TRIM28Q13263 835 aaKnown RBP13.9□□□□□ -0.18
CCDC84-205ENST00000528088 JARID2Q92833 1246 aaPredicted RBP13.9□□□□□ -0.18
CCDC84-205ENST00000528088 RPGRQ92834 1020 aaKnown RBP13.9□□□□□ -0.18
CCDC84-205ENST00000528088 NLRP3Q96P20 1036 aa13.9□□□□□ -0.18
CCDC84-205ENST00000528088 SRCIN1Q9C0H9 1055 aa13.9□□□□□ -0.18
CCDC84-205ENST00000528088 RCAN3Q9UKA8 241 aa13.9□□□□□ -0.18
CCDC84-205ENST00000528088 HSP90B1P14625 803 aaKnown RBP13.89□□□□□ -0.19
CCDC84-205ENST00000528088 CLCN6P51797 869 aa13.89□□□□□ -0.19
CCDC84-205ENST00000528088 CRY2Q49AN0 593 aa13.89□□□□□ -0.19
CCDC84-205ENST00000528088 IER5LQ5T953 404 aa13.89□□□□□ -0.19
CCDC84-205ENST00000528088 SYNE4Q8N205 404 aa13.89□□□□□ -0.19
CCDC84-205ENST00000528088 ZBTB38Q8NAP3 1195 aaPredicted RBP13.89□□□□□ -0.19
CCDC84-205ENST00000528088 IL27Q8NEV9 243 aa13.89□□□□□ -0.19
CCDC84-205ENST00000528088 TAOK3Q9H2K8 898 aa13.89□□□□□ -0.19
CCDC84-205ENST00000528088 C9orf78Q9NZ63 289 aaPredicted RBP13.89□□□□□ -0.19
CCDC84-205ENST00000528088 KDM2BQ8NHM5 1336 aa13.89□□□□□ -0.19
CCDC84-205ENST00000528088 DDX60Q8IY21 1712 aaKnown RBP13.89□□□□□ -0.19
CCDC84-205ENST00000528088 LAMB2P55268 1798 aa13.89□□□□□ -0.19
CCDC84-205ENST00000528088 MYH3P11055 1940 aa13.88□□□□□ -0.19
CCDC84-205ENST00000528088 FER1L6Q2WGJ9 1857 aa13.88□□□□□ -0.19
CCDC84-205ENST00000528088 GRXCR2A6NFK2 248 aa13.88□□□□□ -0.19
CCDC84-205ENST00000528088 GLTPD2A6NH11 291 aa13.88□□□□□ -0.19
CCDC84-205ENST00000528088 HAX1O00165 279 aa13.88□□□□□ -0.19
CCDC84-205ENST00000528088 IRS4O14654 1257 aaPredicted RBP13.88□□□□□ -0.19
CCDC84-205ENST00000528088 TOMM70O94826 608 aa13.88□□□□□ -0.19
CCDC84-205ENST00000528088 HSPA6P17066 643 aa13.88□□□□□ -0.19
CCDC84-205ENST00000528088 BEND3Q5T5X7 828 aa13.88□□□□□ -0.19
CCDC84-205ENST00000528088 ZKSCAN2Q63HK3 967 aa13.88□□□□□ -0.19
CCDC84-205ENST00000528088 UBE3BQ7Z3V4 1068 aa13.88□□□□□ -0.19
CCDC84-205ENST00000528088 FTSJ3Q8IY81 847 aaKnown RBP13.88□□□□□ -0.19
CCDC84-205ENST00000528088 CCDC88AQ3V6T2 1871 aa13.88□□□□□ -0.19
CCDC84-205ENST00000528088 LTBP3Q9NS15 1303 aa13.87□□□□□ -0.19
CCDC84-205ENST00000528088 PCCAP05165 728 aaPredicted RBP13.87□□□□□ -0.19
CCDC84-205ENST00000528088 MAP3K9P80192 1104 aa13.87□□□□□ -0.19
CCDC84-205ENST00000528088 GCKRQ14397 625 aa13.87□□□□□ -0.19
CCDC84-205ENST00000528088 CLUAP1Q96AJ1 413 aa13.87□□□□□ -0.19
CCDC84-205ENST00000528088 ZC3H4Q9UPT8 1303 aaKnown RBP13.87□□□□□ -0.19
CCDC84-205ENST00000528088 POTECB2RU33 542 aa13.87□□□□□ -0.19
CCDC84-205ENST00000528088 ALDH1L1O75891 902 aa13.87□□□□□ -0.19
CCDC84-205ENST00000528088 CCDC93Q567U6 631 aa13.87□□□□□ -0.19
CCDC84-205ENST00000528088 ATF7IPQ6VMQ6 1270 aa13.87□□□□□ -0.19
CCDC84-205ENST00000528088 ZNF277Q9NRM2 450 aaPredicted RBP13.87□□□□□ -0.19
CCDC84-205ENST00000528088 ALDH1B1P30837 517 aa13.86□□□□□ -0.19
CCDC84-205ENST00000528088 CCT4P50991 539 aaKnown RBP13.86□□□□□ -0.19
CCDC84-205ENST00000528088 SOGA3Q5TF21 947 aa13.86□□□□□ -0.19
CCDC84-205ENST00000528088 TMEM92Q6UXU6 159 aa13.86□□□□□ -0.19
CCDC84-205ENST00000528088 ARHGAP45Q92619 1136 aa13.86□□□□□ -0.19
CCDC84-205ENST00000528088 RIC1Q4ADV7 1423 aa13.85□□□□□ -0.19
CCDC84-205ENST00000528088 GRM8O00222 908 aa13.85□□□□□ -0.19
CCDC84-205ENST00000528088 TRIM27P14373 513 aa13.85□□□□□ -0.19
CCDC84-205ENST00000528088 HOXA10P31260 410 aaPredicted RBP13.85□□□□□ -0.19
CCDC84-205ENST00000528088 FKBP4Q02790 459 aaKnown RBP eCLIP13.85□□□□□ -0.19
CCDC84-205ENST00000528088 SLC10A5Q5PT55 438 aa13.85□□□□□ -0.19
CCDC84-205ENST00000528088 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.85□□□□□ -0.19
CCDC84-205ENST00000528088 RBM46Q8TBY0 533 aaKnown RBP13.85□□□□□ -0.19
CCDC84-205ENST00000528088 RBM17Q96I25 401 aaKnown RBP13.85□□□□□ -0.19
CCDC84-205ENST00000528088 CCDC85AQ96PX6 553 aaPredicted RBP13.85□□□□□ -0.19
CCDC84-205ENST00000528088 CEP350Q5VT06 3117 aa13.85□□□□□ -0.19
CCDC84-205ENST00000528088 PDE8AO60658 829 aa13.84□□□□□ -0.19
CCDC84-205ENST00000528088 DDNO94850 711 aaPredicted RBP13.84□□□□□ -0.19
CCDC84-205ENST00000528088 DDX46Q7L014 1031 aaKnown RBP13.84□□□□□ -0.19
CCDC84-205ENST00000528088 C16orf71Q8IYS4 520 aaPredicted RBP13.84□□□□□ -0.19
CCDC84-205ENST00000528088 CHMP3Q9Y3E7 222 aa13.84□□□□□ -0.19
CCDC84-205ENST00000528088 TIAM2Q8IVF5 1701 aa13.84□□□□□ -0.19
CCDC84-205ENST00000528088 SNED1Q8TER0 1413 aa13.84□□□□□ -0.19
CCDC84-205ENST00000528088 CDHR2Q9BYE9 1310 aa13.83□□□□□ -0.2
CCDC84-205ENST00000528088 TAF1P21675 1872 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms