RNA–Protein interactions for RNA: ENST00000527907.5

ATG13-209, Transcript of autophagy related 13, humanhuman

TSL 2

Gene ATG13, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-209ENST00000527907 BRCA2P51587 3418 aa11.58□□□□□ -0.55
ATG13-209ENST00000527907 DUOX1Q9NRD9 1551 aa11.58□□□□□ -0.55
ATG13-209ENST00000527907 RTL9Q8NET4 1388 aa11.58□□□□□ -0.56
ATG13-209ENST00000527907 ALDH1A1P00352 501 aa11.58□□□□□ -0.56
ATG13-209ENST00000527907 SCARF1Q14162 830 aa11.58□□□□□ -0.56
ATG13-209ENST00000527907 WASHC4Q2M389 1173 aa11.58□□□□□ -0.56
ATG13-209ENST00000527907 TTLL7Q6ZT98 887 aa11.58□□□□□ -0.56
ATG13-209ENST00000527907 PPP1R42Q7Z4L9 355 aa11.58□□□□□ -0.56
ATG13-209ENST00000527907 ZNF34Q8IZ26 560 aa11.58□□□□□ -0.56
ATG13-209ENST00000527907 PLEKHF1Q96S99 279 aa11.58□□□□□ -0.56
ATG13-209ENST00000527907 ZBTB3Q9H5J0 574 aa11.58□□□□□ -0.56
ATG13-209ENST00000527907 KCNQ5Q9NR82 932 aa11.58□□□□□ -0.56
ATG13-209ENST00000527907 ADAMTS8Q9UP79 889 aa11.58□□□□□ -0.56
ATG13-209ENST00000527907 ECE2O60344 883 aa11.57□□□□□ -0.56
ATG13-209ENST00000527907 PRKAR2BP31323 418 aa11.57□□□□□ -0.56
ATG13-209ENST00000527907 TTLL12Q14166 644 aaPredicted RBP11.57□□□□□ -0.56
ATG13-209ENST00000527907 SLC10A5Q5PT55 438 aa11.57□□□□□ -0.56
ATG13-209ENST00000527907 RIMBP2O15034 1052 aa11.56□□□□□ -0.56
ATG13-209ENST00000527907 NEFMP07197 916 aa11.56□□□□□ -0.56
ATG13-209ENST00000527907 GRAPQ13588 217 aa11.56□□□□□ -0.56
ATG13-209ENST00000527907 PARP10Q53GL7 1025 aa11.56□□□□□ -0.56
ATG13-209ENST00000527907 DDX46Q7L014 1031 aaKnown RBP11.56□□□□□ -0.56
ATG13-209ENST00000527907 GRAPLQ8TC17 118 aaPredicted RBP11.56□□□□□ -0.56
ATG13-209ENST00000527907 RUNDC1Q96C34 613 aa11.56□□□□□ -0.56
ATG13-209ENST00000527907 ERO1AQ96HE7 468 aa11.56□□□□□ -0.56
ATG13-209ENST00000527907 PITPNM2Q9BZ72 1349 aa11.56□□□□□ -0.56
ATG13-209ENST00000527907 ZNF609O15014 1411 aa11.55□□□□□ -0.56
ATG13-209ENST00000527907 VIL1P09327 827 aaKnown RBP11.55□□□□□ -0.56
ATG13-209ENST00000527907 ZNF280AP59817 542 aaPredicted RBP11.55□□□□□ -0.56
ATG13-209ENST00000527907 TCIRG1Q13488 830 aa11.55□□□□□ -0.56
ATG13-209ENST00000527907 DOK7Q18PE1 504 aa11.55□□□□□ -0.56
ATG13-209ENST00000527907 PRAMEF18Q5VWM3 479 aa11.55□□□□□ -0.56
ATG13-209ENST00000527907 TMC4Q7Z404 712 aa11.55□□□□□ -0.56
ATG13-209ENST00000527907 CD99L2Q8TCZ2 262 aa11.55□□□□□ -0.56
ATG13-209ENST00000527907 ZNF333Q96JL9 665 aa11.55□□□□□ -0.56
ATG13-209ENST00000527907 UTP14AQ9BVJ6 771 aaKnown RBP11.55□□□□□ -0.56
ATG13-209ENST00000527907 EFCC1Q9HA90 598 aa11.55□□□□□ -0.56
ATG13-209ENST00000527907 RRP7AQ9Y3A4 280 aaKnown RBP11.55□□□□□ -0.56
ATG13-209ENST00000527907 MAPK8IP3Q9UPT6 1336 aa11.55□□□□□ -0.56
ATG13-209ENST00000527907 C6orf229H3BNL8 230 aa11.54□□□□□ -0.56
ATG13-209ENST00000527907 GIGYF2Q6Y7W6 1299 aaKnown RBP11.54□□□□□ -0.56
ATG13-209ENST00000527907 FAM9BQ8IZU0 186 aa11.54□□□□□ -0.56
ATG13-209ENST00000527907 NSFL1CQ9UNZ2 370 aaKnown RBP11.54□□□□□ -0.56
ATG13-209ENST00000527907 SCAF8Q9UPN6 1271 aaKnown RBP11.54□□□□□ -0.56
ATG13-209ENST00000527907 HCLS1P14317 486 aaPredicted RBP11.53□□□□□ -0.56
ATG13-209ENST00000527907 MYL6BP14649 208 aa11.53□□□□□ -0.56
ATG13-209ENST00000527907 NF2P35240 595 aa11.53□□□□□ -0.56
ATG13-209ENST00000527907 PTPN12Q05209 780 aaKnown RBP11.53□□□□□ -0.56
ATG13-209ENST00000527907 SLC4A8Q2Y0W8 1093 aa11.53□□□□□ -0.56
ATG13-209ENST00000527907 NCBP3Q53F19 620 aaKnown RBP11.53□□□□□ -0.56
ATG13-209ENST00000527907 SPRYD7Q5W111 196 aa11.53□□□□□ -0.56
ATG13-209ENST00000527907 MCM10Q7L590 875 aa11.53□□□□□ -0.56
ATG13-209ENST00000527907 IFNL1Q8IU54 200 aa11.53□□□□□ -0.56
ATG13-209ENST00000527907 PHACTR3Q96KR7 559 aa11.53□□□□□ -0.56
ATG13-209ENST00000527907 SCN9AQ15858 1988 aa11.53□□□□□ -0.56
ATG13-209ENST00000527907 LAMB4A4D0S4 1761 aa11.53□□□□□ -0.56
ATG13-209ENST00000527907 ANKRD36CQ5JPF3 1778 aa11.53□□□□□ -0.56
ATG13-209ENST00000527907 LRRC37AA6NMS7 1700 aa11.52□□□□□ -0.56
ATG13-209ENST00000527907 DDX60Q8IY21 1712 aaKnown RBP11.52□□□□□ -0.56
ATG13-209ENST00000527907 LAMB2P55268 1798 aa11.52□□□□□ -0.57
ATG13-209ENST00000527907 MANSC4A6NHS7 340 aaPredicted RBP11.52□□□□□ -0.57
ATG13-209ENST00000527907 RTF1Q92541 710 aaKnown RBP11.52□□□□□ -0.57
ATG13-209ENST00000527907 EYA3Q99504 573 aa11.52□□□□□ -0.57
ATG13-209ENST00000527907 PRO3102Q9H379 93 aa11.52□□□□□ -0.57
ATG13-209ENST00000527907 POLLQ9UGP5 575 aa11.52□□□□□ -0.57
ATG13-209ENST00000527907 TAF1P21675 1872 aa11.52□□□□□ -0.57
ATG13-209ENST00000527907 INHBEP58166 350 aa11.51□□□□□ -0.57
ATG13-209ENST00000527907 NFE2L2Q16236 605 aa11.51□□□□□ -0.57
ATG13-209ENST00000527907 SLC9C1Q4G0N8 1177 aa11.51□□□□□ -0.57
ATG13-209ENST00000527907 ARMC9Q7Z3E5 817 aa11.51□□□□□ -0.57
ATG13-209ENST00000527907 NBPF11Q86T75 865 aa11.51□□□□□ -0.57
ATG13-209ENST00000527907 CCDC146Q8IYE0 955 aa11.51□□□□□ -0.57
ATG13-209ENST00000527907 AGBL3Q8NEM8 1001 aa11.51□□□□□ -0.57
ATG13-209ENST00000527907 NECTIN2Q92692 538 aa11.51□□□□□ -0.57
ATG13-209ENST00000527907 DPF3Q92784 378 aa11.51□□□□□ -0.57
ATG13-209ENST00000527907 MYOZ2Q9NPC6 264 aa11.51□□□□□ -0.57
ATG13-209ENST00000527907 IGF2BP3O00425 579 aaKnown RBP eCLIP11.5□□□□□ -0.57
ATG13-209ENST00000527907 HTATSF1O43719 755 aaKnown RBP11.5□□□□□ -0.57
ATG13-209ENST00000527907 MYCP01106 439 aaPredicted RBP11.5□□□□□ -0.57
ATG13-209ENST00000527907 USP17L8P0C7I0 530 aa11.5□□□□□ -0.57
ATG13-209ENST00000527907 TMPOP42166 694 aaKnown RBP11.5□□□□□ -0.57
ATG13-209ENST00000527907 GPSM2P81274 684 aa11.5□□□□□ -0.57
ATG13-209ENST00000527907 RSBN1LQ6PCB5 846 aaPredicted RBP11.5□□□□□ -0.57
ATG13-209ENST00000527907 G3V3G9 751 aa11.49□□□□□ -0.57
ATG13-209ENST00000527907 SOX1O00570 391 aaPredicted RBP11.49□□□□□ -0.57
ATG13-209ENST00000527907 CAP1Q01518 475 aa11.49□□□□□ -0.57
ATG13-209ENST00000527907 SP3Q02447 781 aa11.49□□□□□ -0.57
ATG13-209ENST00000527907 LMOD3Q0VAK6 560 aa11.49□□□□□ -0.57
ATG13-209ENST00000527907 CRHR2Q13324 411 aa11.49□□□□□ -0.57
ATG13-209ENST00000527907 PRKG1Q13976 671 aa11.49□□□□□ -0.57
ATG13-209ENST00000527907 DCTN1Q14203 1278 aa11.49□□□□□ -0.57
ATG13-209ENST00000527907 TAF7Q15545 349 aaPredicted RBP11.49□□□□□ -0.57
ATG13-209ENST00000527907 LDLRAD1Q5T700 205 aa11.49□□□□□ -0.57
ATG13-209ENST00000527907 DCAF8Q5TAQ9 597 aa11.49□□□□□ -0.57
ATG13-209ENST00000527907 TBC1D16Q8TBP0 767 aa11.49□□□□□ -0.57
ATG13-209ENST00000527907 LRCH3Q96II8 777 aa11.49□□□□□ -0.57
ATG13-209ENST00000527907 COL25A1Q9BXS0 654 aaPredicted RBP11.49□□□□□ -0.57
ATG13-209ENST00000527907 ZC3H12CQ9C0D7 883 aaKnown RBP11.49□□□□□ -0.57
ATG13-209ENST00000527907 MIS18AQ9NYP9 233 aa11.49□□□□□ -0.57
ATG13-209ENST00000527907 PTCH2Q9Y6C5 1203 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms