RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 COLQQ9Y215 455 aaPredicted RBP14.26□□□□□ -0.13
NEDD8-204ENST00000526430 COL6A3P12111 3177 aa14.26□□□□□ -0.13
NEDD8-204ENST00000526430 ZNF609O15014 1411 aa14.25□□□□□ -0.13
NEDD8-204ENST00000526430 GPTP24298 496 aa14.25□□□□□ -0.13
NEDD8-204ENST00000526430 SLC10A5Q5PT55 438 aa14.25□□□□□ -0.13
NEDD8-204ENST00000526430 KIF6Q6ZMV9 814 aa14.25□□□□□ -0.13
NEDD8-204ENST00000526430 GGA3Q9NZ52 723 aa14.25□□□□□ -0.13
NEDD8-204ENST00000526430 MAPK8IP3Q9UPT6 1336 aa14.24□□□□□ -0.13
NEDD8-204ENST00000526430 NEUROD2Q15784 382 aa14.24□□□□□ -0.13
NEDD8-204ENST00000526430 KIF4BQ2VIQ3 1234 aa14.24□□□□□ -0.13
NEDD8-204ENST00000526430 NCBP3Q53F19 620 aaKnown RBP14.24□□□□□ -0.13
NEDD8-204ENST00000526430 PARP10Q53GL7 1025 aa14.24□□□□□ -0.13
NEDD8-204ENST00000526430 PPP1R42Q7Z4L9 355 aa14.24□□□□□ -0.13
NEDD8-204ENST00000526430 RANBP2P49792 3224 aaKnown RBP14.24□□□□□ -0.13
NEDD8-204ENST00000526430 TMC4Q7Z404 712 aa14.23□□□□□ -0.13
NEDD8-204ENST00000526430 GIGYF2Q6Y7W6 1299 aaKnown RBP14.22□□□□□ -0.13
NEDD8-204ENST00000526430 RTL9Q8NET4 1388 aa14.22□□□□□ -0.13
NEDD8-204ENST00000526430 PITPNM2Q9BZ72 1349 aa14.21□□□□□ -0.13
NEDD8-204ENST00000526430 SREBF2Q12772 1141 aa14.21□□□□□ -0.13
NEDD8-204ENST00000526430 CCDC27Q2M243 656 aa14.21□□□□□ -0.13
NEDD8-204ENST00000526430 RBM26Q5T8P6 1007 aaKnown RBP14.21□□□□□ -0.13
NEDD8-204ENST00000526430 TTLL7Q6ZT98 887 aa14.21□□□□□ -0.13
NEDD8-204ENST00000526430 ZNF521Q96K83 1311 aa14.2□□□□□ -0.14
NEDD8-204ENST00000526430 NEFMP07197 916 aa14.2□□□□□ -0.14
NEDD8-204ENST00000526430 GRAPQ13588 217 aa14.2□□□□□ -0.14
NEDD8-204ENST00000526430 WASHC4Q2M389 1173 aa14.2□□□□□ -0.14
NEDD8-204ENST00000526430 WWC1Q8IX03 1113 aa14.2□□□□□ -0.14
NEDD8-204ENST00000526430 SLC17A8Q8NDX2 589 aa14.2□□□□□ -0.14
NEDD8-204ENST00000526430 GRAPLQ8TC17 118 aaPredicted RBP14.2□□□□□ -0.14
NEDD8-204ENST00000526430 NECTIN2Q92692 538 aa14.2□□□□□ -0.14
NEDD8-204ENST00000526430 ARMC5Q96C12 935 aa14.2□□□□□ -0.14
NEDD8-204ENST00000526430 ZBTB3Q9H5J0 574 aa14.2□□□□□ -0.14
NEDD8-204ENST00000526430 MIS18AQ9NYP9 233 aa14.2□□□□□ -0.14
NEDD8-204ENST00000526430 ASTN2O75129 1339 aaPredicted RBP14.19□□□□□ -0.14
NEDD8-204ENST00000526430 ZNF853P0CG23 659 aa14.19□□□□□ -0.14
NEDD8-204ENST00000526430 TAF7Q15545 349 aaPredicted RBP14.19□□□□□ -0.14
NEDD8-204ENST00000526430 DDX46Q7L014 1031 aaKnown RBP14.19□□□□□ -0.14
NEDD8-204ENST00000526430 OTOP1Q7RTM1 612 aa14.19□□□□□ -0.14
NEDD8-204ENST00000526430 NGEFQ8N5V2 710 aa14.19□□□□□ -0.14
NEDD8-204ENST00000526430 UTP14AQ9BVJ6 771 aaKnown RBP14.19□□□□□ -0.14
NEDD8-204ENST00000526430 DBNDD1Q9H9R9 158 aa14.19□□□□□ -0.14
NEDD8-204ENST00000526430 ZNF646O15015 1829 aaPredicted RBP14.19□□□□□ -0.14
NEDD8-204ENST00000526430 ALDH1A1P00352 501 aa14.18□□□□□ -0.14
NEDD8-204ENST00000526430 VIL1P09327 827 aaKnown RBP14.18□□□□□ -0.14
NEDD8-204ENST00000526430 ZNF280AP59817 542 aaPredicted RBP14.18□□□□□ -0.14
NEDD8-204ENST00000526430 ANGEL2Q5VTE6 544 aaKnown RBP14.18□□□□□ -0.14
NEDD8-204ENST00000526430 RTF1Q92541 710 aaKnown RBP14.18□□□□□ -0.14
NEDD8-204ENST00000526430 OTUD5Q96G74 571 aa14.18□□□□□ -0.14
NEDD8-204ENST00000526430 R3HDMLQ9H3Y0 253 aa14.18□□□□□ -0.14
NEDD8-204ENST00000526430 SPINK5Q9NQ38 1064 aaPredicted RBP14.18□□□□□ -0.14
NEDD8-204ENST00000526430 TRIM17Q9Y577 477 aa14.18□□□□□ -0.14
NEDD8-204ENST00000526430 CHL1O00533 1208 aa14.17□□□□□ -0.14
NEDD8-204ENST00000526430 ECE2O60344 883 aa14.17□□□□□ -0.14
NEDD8-204ENST00000526430 EN2P19622 333 aaPredicted RBP14.17□□□□□ -0.14
NEDD8-204ENST00000526430 SALL2Q9Y467 1007 aaPredicted RBP14.17□□□□□ -0.14
NEDD8-204ENST00000526430 ERBB4Q15303 1308 aa14.16□□□□□ -0.14
NEDD8-204ENST00000526430 SCARF1Q14162 830 aa14.16□□□□□ -0.14
NEDD8-204ENST00000526430 MOB2Q70IA6 237 aa14.16□□□□□ -0.14
NEDD8-204ENST00000526430 PTPN22Q9Y2R2 807 aa14.16□□□□□ -0.14
NEDD8-204ENST00000526430 ECM29Q5VYK3 1845 aa14.15□□□□□ -0.14
NEDD8-204ENST00000526430 UBE2Q2LH0YL09 131 aa14.15□□□□□ -0.14
NEDD8-204ENST00000526430 AGBL3Q8NEM8 1001 aa14.15□□□□□ -0.14
NEDD8-204ENST00000526430 KCNQ5Q9NR82 932 aa14.15□□□□□ -0.14
NEDD8-204ENST00000526430 MYL6BP14649 208 aa14.14□□□□□ -0.15
NEDD8-204ENST00000526430 LMOD3Q0VAK6 560 aa14.14□□□□□ -0.15
NEDD8-204ENST00000526430 EYA3Q99504 573 aa14.14□□□□□ -0.15
NEDD8-204ENST00000526430 POLLQ9UGP5 575 aa14.14□□□□□ -0.15
NEDD8-204ENST00000526430 COL4A1P02462 1669 aa14.14□□□□□ -0.15
NEDD8-204ENST00000526430 H0YGN5 161 aa14.13□□□□□ -0.15
NEDD8-204ENST00000526430 MNX1P50219 401 aaPredicted RBP14.13□□□□□ -0.15
NEDD8-204ENST00000526430 INHBEP58166 350 aa14.13□□□□□ -0.15
NEDD8-204ENST00000526430 EIF4A1P60842 406 aaKnown RBP14.13□□□□□ -0.15
NEDD8-204ENST00000526430 WDR63Q8IWG1 891 aa14.13□□□□□ -0.15
NEDD8-204ENST00000526430 ERO1AQ96HE7 468 aa14.13□□□□□ -0.15
NEDD8-204ENST00000526430 BABAM1Q9NWV8 329 aa14.13□□□□□ -0.15
NEDD8-204ENST00000526430 NSFL1CQ9UNZ2 370 aaKnown RBP14.13□□□□□ -0.15
NEDD8-204ENST00000526430 RIMBP2O15034 1052 aa14.12□□□□□ -0.15
NEDD8-204ENST00000526430 HCLS1P14317 486 aaPredicted RBP14.12□□□□□ -0.15
NEDD8-204ENST00000526430 TCIRG1Q13488 830 aa14.12□□□□□ -0.15
NEDD8-204ENST00000526430 TMEM106CQ9BVX2 250 aa14.12□□□□□ -0.15
NEDD8-204ENST00000526430 MBIPQ9NS73 344 aa14.12□□□□□ -0.15
NEDD8-204ENST00000526430 C6orf229H3BNL8 230 aa14.11□□□□□ -0.15
NEDD8-204ENST00000526430 NF2P35240 595 aa14.11□□□□□ -0.15
NEDD8-204ENST00000526430 DOK7Q18PE1 504 aa14.11□□□□□ -0.15
NEDD8-204ENST00000526430 KRT24Q2M2I5 525 aa14.11□□□□□ -0.15
NEDD8-204ENST00000526430 SPRYD7Q5W111 196 aa14.11□□□□□ -0.15
NEDD8-204ENST00000526430 RSBN1LQ6PCB5 846 aaPredicted RBP14.11□□□□□ -0.15
NEDD8-204ENST00000526430 LRP10Q7Z4F1 713 aa14.11□□□□□ -0.15
NEDD8-204ENST00000526430 NLRP10Q86W26 655 aa14.11□□□□□ -0.15
NEDD8-204ENST00000526430 TRMT2AQ8IZ69 625 aaKnown RBP14.11□□□□□ -0.15
NEDD8-204ENST00000526430 ZNF333Q96JL9 665 aa14.11□□□□□ -0.15
NEDD8-204ENST00000526430 GMLQ99445 158 aa14.11□□□□□ -0.15
NEDD8-204ENST00000526430 MYOZ2Q9NPC6 264 aa14.11□□□□□ -0.15
NEDD8-204ENST00000526430 IFT57Q9NWB7 429 aa14.11□□□□□ -0.15
NEDD8-204ENST00000526430 IL16Q14005 1332 aa14.11□□□□□ -0.15
NEDD8-204ENST00000526430 SH3TC1Q8TE82 1336 aa14.11□□□□□ -0.15
NEDD8-204ENST00000526430 MANSC4A6NHS7 340 aaPredicted RBP14.1□□□□□ -0.15
NEDD8-204ENST00000526430 GPSM2P81274 684 aa14.1□□□□□ -0.15
NEDD8-204ENST00000526430 MKRN3Q13064 507 aaKnown RBP14.1□□□□□ -0.15
NEDD8-204ENST00000526430 TTLL12Q14166 644 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms