RNA–Protein interactions for RNA: ENST00000525933.1

RPS3-205, Transcript of ribosomal protein S3, human

TSL 5

Gene RPS3, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS3-205	ENST00000525933	GRAP	Q13588	217 aa		13.78	□□□□□ -0.2
RPS3-205	ENST00000525933	DOK7	Q18PE1	504 aa		13.78	□□□□□ -0.2
RPS3-205	ENST00000525933	WASHC4	Q2M389	1173 aa		13.78	□□□□□ -0.2
RPS3-205	ENST00000525933	GRAPL	Q8TC17	118 aa	Predicted RBP	13.78	□□□□□ -0.2
RPS3-205	ENST00000525933	SZT2	Q5T011	3432 aa		13.77	□□□□□ -0.2
RPS3-205	ENST00000525933	HTATSF1	O43719	755 aa	Known RBP	13.77	□□□□□ -0.21
RPS3-205	ENST00000525933	ECE2	O60344	883 aa		13.77	□□□□□ -0.21
RPS3-205	ENST00000525933	RPS12	P25398	132 aa	Known RBP	13.77	□□□□□ -0.21
RPS3-205	ENST00000525933	DDX46	Q7L014	1031 aa	Known RBP	13.77	□□□□□ -0.21
RPS3-205	ENST00000525933	ZNF428	Q96B54	188 aa		13.77	□□□□□ -0.21
RPS3-205	ENST00000525933	R3HDML	Q9H3Y0	253 aa		13.77	□□□□□ -0.21
RPS3-205	ENST00000525933	SCAF8	Q9UPN6	1271 aa	Known RBP	13.77	□□□□□ -0.21
RPS3-205	ENST00000525933	UBE2Q2L	H0YL09	131 aa		13.76	□□□□□ -0.21
RPS3-205	ENST00000525933	ANGEL2	Q5VTE6	544 aa	Known RBP	13.76	□□□□□ -0.21
RPS3-205	ENST00000525933	LRP10	Q7Z4F1	713 aa		13.76	□□□□□ -0.21
RPS3-205	ENST00000525933	POLL	Q9UGP5	575 aa		13.76	□□□□□ -0.21
RPS3-205	ENST00000525933	KIAA0100	Q14667	2235 aa	Known RBP	13.75	□□□□□ -0.21
RPS3-205	ENST00000525933	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.75	□□□□□ -0.21
RPS3-205	ENST00000525933	TM4SF4	P48230	202 aa		13.75	□□□□□ -0.21
RPS3-205	ENST00000525933	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
RPS3-205	ENST00000525933	MKRN3	Q13064	507 aa	Known RBP	13.75	□□□□□ -0.21
RPS3-205	ENST00000525933	SCARF1	Q14162	830 aa		13.75	□□□□□ -0.21
RPS3-205	ENST00000525933	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.75	□□□□□ -0.21
RPS3-205	ENST00000525933	C6orf229	H3BNL8	230 aa		13.74	□□□□□ -0.21
RPS3-205	ENST00000525933	ANXA1	P04083	346 aa		13.74	□□□□□ -0.21
RPS3-205	ENST00000525933	GPSM2	P81274	684 aa		13.74	□□□□□ -0.21
RPS3-205	ENST00000525933	PRAMEF18	Q5VWM3	479 aa		13.74	□□□□□ -0.21
RPS3-205	ENST00000525933	NLRP10	Q86W26	655 aa		13.74	□□□□□ -0.21
RPS3-205	ENST00000525933	CELF1	Q92879	486 aa	Known RBP	13.74	□□□□□ -0.21
RPS3-205	ENST00000525933	FKTN	O75072	461 aa		13.73	□□□□□ -0.21
RPS3-205	ENST00000525933	VIL1	P09327	827 aa	Known RBP	13.73	□□□□□ -0.21
RPS3-205	ENST00000525933	PDIA6	Q15084	440 aa		13.73	□□□□□ -0.21
RPS3-205	ENST00000525933	PROSER3	Q2NL68	480 aa		13.73	□□□□□ -0.21
RPS3-205	ENST00000525933	NOM1	Q5C9Z4	860 aa	Known RBP	13.73	□□□□□ -0.21
RPS3-205	ENST00000525933	FKBP1B	P68106	108 aa		13.72	□□□□□ -0.21
RPS3-205	ENST00000525933	PNISR	Q8TF01	805 aa	Known RBP	13.72	□□□□□ -0.21
RPS3-205	ENST00000525933	TRMT112	Q9UI30	125 aa	Known RBP	13.72	□□□□□ -0.21
RPS3-205	ENST00000525933	NUDC	Q9Y266	331 aa		13.72	□□□□□ -0.21
RPS3-205	ENST00000525933	EIF2S2	P20042	333 aa	Known RBP	13.71	□□□□□ -0.21
RPS3-205	ENST00000525933	TMC4	Q7Z404	712 aa		13.71	□□□□□ -0.21
RPS3-205	ENST00000525933	CFAP53	Q96M91	514 aa		13.71	□□□□□ -0.21
RPS3-205	ENST00000525933	COLQ	Q9Y215	455 aa	Predicted RBP	13.71	□□□□□ -0.21
RPS3-205	ENST00000525933	ZNF646	O15015	1829 aa	Predicted RBP	13.71	□□□□□ -0.22
RPS3-205	ENST00000525933	ERBB4	Q15303	1308 aa		13.7	□□□□□ -0.22
RPS3-205	ENST00000525933	EN2	P19622	333 aa	Predicted RBP	13.7	□□□□□ -0.22
RPS3-205	ENST00000525933	ZNF280A	P59817	542 aa	Predicted RBP	13.7	□□□□□ -0.22
RPS3-205	ENST00000525933	TBC1D16	Q8TBP0	767 aa		13.7	□□□□□ -0.22
RPS3-205	ENST00000525933	TRIM17	Q9Y577	477 aa		13.7	□□□□□ -0.22
RPS3-205	ENST00000525933	SH3TC1	Q8TE82	1336 aa		13.69	□□□□□ -0.22
RPS3-205	ENST00000525933	AIMP1	Q12904	312 aa	Known RBP	13.69	□□□□□ -0.22
RPS3-205	ENST00000525933	TTLL12	Q14166	644 aa	Predicted RBP	13.69	□□□□□ -0.22
RPS3-205	ENST00000525933	EYA3	Q99504	573 aa		13.69	□□□□□ -0.22
RPS3-205	ENST00000525933	CFHR5	Q9BXR6	569 aa		13.69	□□□□□ -0.22
RPS3-205	ENST00000525933	LAMB1	P07942	1786 aa		13.69	□□□□□ -0.22
RPS3-205	ENST00000525933	TCIRG1	Q13488	830 aa		13.68	□□□□□ -0.22
RPS3-205	ENST00000525933	INTS3	Q68E01	1043 aa	Known RBP	13.68	□□□□□ -0.22
RPS3-205	ENST00000525933	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.68	□□□□□ -0.22
RPS3-205	ENST00000525933	COPS6	Q7L5N1	327 aa		13.68	□□□□□ -0.22
RPS3-205	ENST00000525933	OTOP1	Q7RTM1	612 aa		13.68	□□□□□ -0.22
RPS3-205	ENST00000525933	MYOZ2	Q9NPC6	264 aa		13.68	□□□□□ -0.22
RPS3-205	ENST00000525933	TRIOBP	Q9H2D6	2365 aa		13.68	□□□□□ -0.22
RPS3-205	ENST00000525933	PITPNM2	Q9BZ72	1349 aa		13.68	□□□□□ -0.22
RPS3-205	ENST00000525933	PTPN12	Q05209	780 aa	Known RBP	13.67	□□□□□ -0.22
RPS3-205	ENST00000525933	SREBF2	Q12772	1141 aa		13.67	□□□□□ -0.22
RPS3-205	ENST00000525933	HSP90AB3P	Q58FF7	597 aa		13.67	□□□□□ -0.22
RPS3-205	ENST00000525933	XAGE3	Q8WTP9	111 aa		13.67	□□□□□ -0.22
RPS3-205	ENST00000525933	NECTIN2	Q92692	538 aa		13.67	□□□□□ -0.22
RPS3-205	ENST00000525933	GML	Q99445	158 aa		13.67	□□□□□ -0.22
RPS3-205	ENST00000525933	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.67	□□□□□ -0.22
RPS3-205	ENST00000525933	CEP290	O15078	2479 aa		13.67	□□□□□ -0.22
RPS3-205	ENST00000525933	PRKG1	Q13976	671 aa		13.66	□□□□□ -0.22
RPS3-205	ENST00000525933	SF3B3	Q15393	1217 aa	Known RBP	13.66	□□□□□ -0.22
RPS3-205	ENST00000525933	NBPF9	Q3BBW0	867 aa		13.66	□□□□□ -0.22
RPS3-205	ENST00000525933	AGBL3	Q8NEM8	1001 aa		13.66	□□□□□ -0.22
RPS3-205	ENST00000525933	ZNF609	O15014	1411 aa		13.66	□□□□□ -0.22
RPS3-205	ENST00000525933		G3V3G9	751 aa		13.65	□□□□□ -0.22
RPS3-205	ENST00000525933	DLL1	O00548	723 aa		13.65	□□□□□ -0.22
RPS3-205	ENST00000525933	USP17L8	P0C7I0	530 aa		13.65	□□□□□ -0.22
RPS3-205	ENST00000525933	MKRN4P	Q13434	485 aa	Predicted RBP	13.65	□□□□□ -0.22
RPS3-205	ENST00000525933	DCAF8	Q5TAQ9	597 aa		13.65	□□□□□ -0.22
RPS3-205	ENST00000525933	FAM89A	Q96GI7	184 aa		13.65	□□□□□ -0.22
RPS3-205	ENST00000525933	PTPN22	Q9Y2R2	807 aa		13.65	□□□□□ -0.22
RPS3-205	ENST00000525933	PPP2R1A	P30153	589 aa		13.64	□□□□□ -0.23
RPS3-205	ENST00000525933	CAP1	Q01518	475 aa		13.64	□□□□□ -0.23
RPS3-205	ENST00000525933	RTL5	Q5HYW3	569 aa	Predicted RBP	13.64	□□□□□ -0.23
RPS3-205	ENST00000525933	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.64	□□□□□ -0.23
RPS3-205	ENST00000525933	FZD1	Q9UP38	647 aa		13.64	□□□□□ -0.23
RPS3-205	ENST00000525933	COL6A3	P12111	3177 aa		13.64	□□□□□ -0.23
RPS3-205	ENST00000525933	SPEF2	Q9C093	1822 aa		13.64	□□□□□ -0.23
RPS3-205	ENST00000525933	UFL1	O94874	794 aa		13.64	□□□□□ -0.23
RPS3-205	ENST00000525933	RPS8	P62241	208 aa	Known RBP	13.64	□□□□□ -0.23
RPS3-205	ENST00000525933	SPRYD7	Q5W111	196 aa		13.64	□□□□□ -0.23
RPS3-205	ENST00000525933	CD99L2	Q8TCZ2	262 aa		13.64	□□□□□ -0.23
RPS3-205	ENST00000525933	MXD3	Q9BW11	206 aa		13.64	□□□□□ -0.23
RPS3-205	ENST00000525933	PCGF6	Q9BYE7	350 aa		13.64	□□□□□ -0.23
RPS3-205	ENST00000525933	PODXL2	Q9NZ53	605 aa		13.64	□□□□□ -0.23
RPS3-205	ENST00000525933	TSPYL4	Q9UJ04	414 aa		13.64	□□□□□ -0.23
RPS3-205	ENST00000525933	CLSPN	Q9HAW4	1339 aa		13.63	□□□□□ -0.23
RPS3-205	ENST00000525933	IFNL1	Q8IU54	200 aa		13.63	□□□□□ -0.23
RPS3-205	ENST00000525933	OTUD5	Q96G74	571 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms