RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 GPSM2P81274 684 aa16.4■□□□□ 0.22
CCDC90B-205ENST00000525916 SULF1Q8IWU6 871 aa16.4■□□□□ 0.22
CCDC90B-205ENST00000525916 SPEF2Q9C093 1822 aa16.4■□□□□ 0.22
CCDC90B-205ENST00000525916 RASAL3Q86YV0 1011 aa16.39■□□□□ 0.21
CCDC90B-205ENST00000525916 CDCA5Q96FF9 252 aa16.39■□□□□ 0.21
CCDC90B-205ENST00000525916 ZNF646O15015 1829 aaPredicted RBP16.38■□□□□ 0.21
CCDC90B-205ENST00000525916 HPS5Q9UPZ3 1129 aa16.38■□□□□ 0.21
CCDC90B-205ENST00000525916 FAM89AQ96GI7 184 aa16.37■□□□□ 0.21
CCDC90B-205ENST00000525916 EYA3Q99504 573 aa16.37■□□□□ 0.21
CCDC90B-205ENST00000525916 VIL1P09327 827 aaKnown RBP16.36■□□□□ 0.21
CCDC90B-205ENST00000525916 SF3B3Q15393 1217 aaKnown RBP16.36■□□□□ 0.21
CCDC90B-205ENST00000525916 KRT24Q2M2I5 525 aa16.36■□□□□ 0.21
CCDC90B-205ENST00000525916 RTL5Q5HYW3 569 aaPredicted RBP16.36■□□□□ 0.21
CCDC90B-205ENST00000525916 ANGEL2Q5VTE6 544 aaKnown RBP16.36■□□□□ 0.21
CCDC90B-205ENST00000525916 TBC1D16Q8TBP0 767 aa16.36■□□□□ 0.21
CCDC90B-205ENST00000525916 ATP5J2-PTCD1G3V325 749 aa16.35■□□□□ 0.21
CCDC90B-205ENST00000525916 RIPK4P57078 832 aa16.35■□□□□ 0.21
CCDC90B-205ENST00000525916 CHPF2Q9P2E5 772 aa16.35■□□□□ 0.21
CCDC90B-205ENST00000525916 SCARF1Q14162 830 aa16.34■□□□□ 0.21
CCDC90B-205ENST00000525916 MOB2Q70IA6 237 aa16.34■□□□□ 0.21
CCDC90B-205ENST00000525916 REM2Q8IYK8 340 aaPredicted RBP16.34■□□□□ 0.21
CCDC90B-205ENST00000525916 ISCA1Q9BUE6 129 aa16.34■□□□□ 0.21
CCDC90B-205ENST00000525916 PNNQ9H307 717 aaKnown RBP16.34■□□□□ 0.21
CCDC90B-205ENST00000525916 BABAM1Q9NWV8 329 aa16.34■□□□□ 0.21
CCDC90B-205ENST00000525916 HDAC9Q9UKV0 1011 aa16.34■□□□□ 0.21
CCDC90B-205ENST00000525916 SCAF8Q9UPN6 1271 aaKnown RBP16.34■□□□□ 0.21
CCDC90B-205ENST00000525916 MYH3P11055 1940 aa16.34■□□□□ 0.21
CCDC90B-205ENST00000525916 ZNF609O15014 1411 aa16.34■□□□□ 0.21
CCDC90B-205ENST00000525916 UFL1O94874 794 aa16.33■□□□□ 0.2
CCDC90B-205ENST00000525916 TBC1D8O95759 1140 aa16.33■□□□□ 0.2
CCDC90B-205ENST00000525916 PLBD2Q8NHP8 589 aa16.33■□□□□ 0.2
CCDC90B-205ENST00000525916 ZNF296Q8WUU4 475 aaPredicted RBP16.33■□□□□ 0.2
CCDC90B-205ENST00000525916 ZC3H12CQ9C0D7 883 aaKnown RBP16.33■□□□□ 0.2
CCDC90B-205ENST00000525916 G3V3G9 751 aa16.32■□□□□ 0.2
CCDC90B-205ENST00000525916 MKI67P46013 3256 aaKnown RBP16.32■□□□□ 0.2
CCDC90B-205ENST00000525916 ZNF280AP59817 542 aaPredicted RBP16.32■□□□□ 0.2
CCDC90B-205ENST00000525916 RPS8P62241 208 aaKnown RBP16.32■□□□□ 0.2
CCDC90B-205ENST00000525916 DCAF8Q5TAQ9 597 aa16.32■□□□□ 0.2
CCDC90B-205ENST00000525916 RSBN1LQ6PCB5 846 aaPredicted RBP16.32■□□□□ 0.2
CCDC90B-205ENST00000525916 IRS4O14654 1257 aaPredicted RBP16.31■□□□□ 0.2
CCDC90B-205ENST00000525916 FKBP1BP68106 108 aa16.31■□□□□ 0.2
CCDC90B-205ENST00000525916 PKN2Q16513 984 aaKnown RBP16.31■□□□□ 0.2
CCDC90B-205ENST00000525916 ANKRD13DQ6ZTN6 518 aa16.31■□□□□ 0.2
CCDC90B-205ENST00000525916 AGBL3Q8NEM8 1001 aa16.31■□□□□ 0.2
CCDC90B-205ENST00000525916 PODXL2Q9NZ53 605 aa16.31■□□□□ 0.2
CCDC90B-205ENST00000525916 RBBP6Q7Z6E9 1792 aaKnown RBP16.31■□□□□ 0.2
CCDC90B-205ENST00000525916 UBE2Q2LH0YL09 131 aa16.3■□□□□ 0.2
CCDC90B-205ENST00000525916 TMPOP42166 694 aaKnown RBP16.3■□□□□ 0.2
CCDC90B-205ENST00000525916 HDGFL1Q5TGJ6 251 aa16.3■□□□□ 0.2
CCDC90B-205ENST00000525916 MYOZ2Q9NPC6 264 aa16.3■□□□□ 0.2
CCDC90B-205ENST00000525916 SEC31BQ9NQW1 1179 aa16.3■□□□□ 0.2
CCDC90B-205ENST00000525916 ANKIB1Q9P2G1 1089 aa16.3■□□□□ 0.2
CCDC90B-205ENST00000525916 GGA1Q9UJY5 639 aa16.3■□□□□ 0.2
CCDC90B-205ENST00000525916 LAMB1P07942 1786 aa16.3■□□□□ 0.2
CCDC90B-205ENST00000525916 PITPNM2Q9BZ72 1349 aa16.29■□□□□ 0.2
CCDC90B-205ENST00000525916 LMOD3Q0VAK6 560 aa16.29■□□□□ 0.2
CCDC90B-205ENST00000525916 MKRN3Q13064 507 aaKnown RBP16.29■□□□□ 0.2
CCDC90B-205ENST00000525916 PRAMEF18Q5VWM3 479 aa16.29■□□□□ 0.2
CCDC90B-205ENST00000525916 GMLQ99445 158 aa16.29■□□□□ 0.2
CCDC90B-205ENST00000525916 HTTP42858 3142 aa16.29■□□□□ 0.2
CCDC90B-205ENST00000525916 ECM29Q5VYK3 1845 aa16.29■□□□□ 0.2
CCDC90B-205ENST00000525916 CENPFP49454 3210 aa16.28■□□□□ 0.2
CCDC90B-205ENST00000525916 GPR25O00155 361 aa16.28■□□□□ 0.2
CCDC90B-205ENST00000525916 USP17L8P0C7I0 530 aa16.28■□□□□ 0.2
CCDC90B-205ENST00000525916 FBXO46Q6PJ61 603 aaPredicted RBP16.28■□□□□ 0.2
CCDC90B-205ENST00000525916 LAS1LQ9Y4W2 734 aaKnown RBP16.28■□□□□ 0.2
CCDC90B-205ENST00000525916 CHL1O00533 1208 aa16.27■□□□□ 0.2
CCDC90B-205ENST00000525916 TTLL12Q14166 644 aaPredicted RBP16.27■□□□□ 0.2
CCDC90B-205ENST00000525916 DBF4Q9UBU7 674 aaPredicted RBP16.27■□□□□ 0.2
CCDC90B-205ENST00000525916 TM4SF4P48230 202 aa16.26■□□□□ 0.19
CCDC90B-205ENST00000525916 NEUROD2Q15784 382 aa16.26■□□□□ 0.19
CCDC90B-205ENST00000525916 NBPF9Q3BBW0 867 aa16.26■□□□□ 0.19
CCDC90B-205ENST00000525916 USP17L3A6NCW0 530 aa16.25■□□□□ 0.19
CCDC90B-205ENST00000525916 USP17L4A6NCW7 530 aa16.25■□□□□ 0.19
CCDC90B-205ENST00000525916 TRIM28Q13263 835 aaKnown RBP16.25■□□□□ 0.19
CCDC90B-205ENST00000525916 NOM1Q5C9Z4 860 aaKnown RBP16.25■□□□□ 0.19
CCDC90B-205ENST00000525916 USP17L1Q7RTZ2 530 aa16.25■□□□□ 0.19
CCDC90B-205ENST00000525916 ZBTB38Q8NAP3 1195 aaPredicted RBP16.25■□□□□ 0.19
CCDC90B-205ENST00000525916 CCDC85AQ96PX6 553 aaPredicted RBP16.25■□□□□ 0.19
CCDC90B-205ENST00000525916 R3HDMLQ9H3Y0 253 aa16.25■□□□□ 0.19
CCDC90B-205ENST00000525916 HOXB7P09629 217 aa16.24■□□□□ 0.19
CCDC90B-205ENST00000525916 KIAA0100Q14667 2235 aaKnown RBP16.24■□□□□ 0.19
CCDC90B-205ENST00000525916 XDHP47989 1333 aa16.23■□□□□ 0.19
CCDC90B-205ENST00000525916 FKTNO75072 461 aa16.23■□□□□ 0.19
CCDC90B-205ENST00000525916 SREBF2Q12772 1141 aa16.23■□□□□ 0.19
CCDC90B-205ENST00000525916 CCDC152Q4G0S7 254 aa16.23■□□□□ 0.19
CCDC90B-205ENST00000525916 CCDC146Q8IYE0 955 aa16.23■□□□□ 0.19
CCDC90B-205ENST00000525916 JARID2Q92833 1246 aaPredicted RBP16.23■□□□□ 0.19
CCDC90B-205ENST00000525916 GCC1Q96CN9 775 aa16.23■□□□□ 0.19
CCDC90B-205ENST00000525916 MXD3Q9BW11 206 aa16.23■□□□□ 0.19
CCDC90B-205ENST00000525916 HYPKQ9NX55 129 aa16.23■□□□□ 0.19
CCDC90B-205ENST00000525916 BRCA2P51587 3418 aa16.23■□□□□ 0.19
CCDC90B-205ENST00000525916 WTIPA6NIX2 430 aaPredicted RBP16.22■□□□□ 0.19
CCDC90B-205ENST00000525916 RIC3Q7Z5B4 369 aa16.22■□□□□ 0.19
CCDC90B-205ENST00000525916 PODNQ7Z5L7 613 aa16.22■□□□□ 0.19
CCDC90B-205ENST00000525916 MYD88Q99836 296 aa16.22■□□□□ 0.19
CCDC90B-205ENST00000525916 TRIM35Q9UPQ4 493 aa16.22■□□□□ 0.19
CCDC90B-205ENST00000525916 WNT10BO00744 389 aa16.21■□□□□ 0.19
CCDC90B-205ENST00000525916 PDE8AO60658 829 aa16.21■□□□□ 0.19
CCDC90B-205ENST00000525916 SASH1O94885 1247 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms