RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 NBPF11Q86T75 865 aa8.41□□□□□ -1.06
NSMCE2-211ENST00000523549 RNF112Q9ULX5 631 aa8.41□□□□□ -1.06
NSMCE2-211ENST00000523549 SRPK2P78362 688 aaKnown RBP8.4□□□□□ -1.06
NSMCE2-211ENST00000523549 TRIP4Q15650 581 aaPredicted RBP8.4□□□□□ -1.06
NSMCE2-211ENST00000523549 IL22RA1Q8N6P7 574 aa8.4□□□□□ -1.06
NSMCE2-211ENST00000523549 COL26A1Q96A83 441 aa8.4□□□□□ -1.06
NSMCE2-211ENST00000523549 ZMIZ1Q9ULJ6 1067 aa8.4□□□□□ -1.06
NSMCE2-211ENST00000523549 ALX3O95076 343 aa8.39□□□□□ -1.07
NSMCE2-211ENST00000523549 BRD2P25440 801 aaKnown RBP8.39□□□□□ -1.07
NSMCE2-211ENST00000523549 SETDB1Q15047 1291 aa8.39□□□□□ -1.07
NSMCE2-211ENST00000523549 NLRP13Q86W25 1043 aa8.39□□□□□ -1.07
NSMCE2-211ENST00000523549 NSUN5Q96P11 429 aaKnown RBP8.39□□□□□ -1.07
NSMCE2-211ENST00000523549 MRPL18Q9H0U6 180 aaKnown RBP8.39□□□□□ -1.07
NSMCE2-211ENST00000523549 AKTIPQ9H8T0 292 aa8.39□□□□□ -1.07
NSMCE2-211ENST00000523549 SRA1Q9HD15 236 aaKnown RBP8.39□□□□□ -1.07
NSMCE2-211ENST00000523549 F8W735 103 aaPredicted RBP8.38□□□□□ -1.07
NSMCE2-211ENST00000523549 GHRHP01286 108 aa8.38□□□□□ -1.07
NSMCE2-211ENST00000523549 GDF6Q6KF10 455 aaPredicted RBP8.38□□□□□ -1.07
NSMCE2-211ENST00000523549 Q6ZS46 218 aa8.38□□□□□ -1.07
NSMCE2-211ENST00000523549 SLC51AQ86UW1 340 aa8.38□□□□□ -1.07
NSMCE2-211ENST00000523549 BICRAQ9NZM4 1560 aa8.38□□□□□ -1.07
NSMCE2-211ENST00000523549 TNFRSF10BO14763 440 aa8.37□□□□□ -1.07
NSMCE2-211ENST00000523549 PRMT3O60678 531 aa8.37□□□□□ -1.07
NSMCE2-211ENST00000523549 C16orf46Q6P387 395 aa8.37□□□□□ -1.07
NSMCE2-211ENST00000523549 MAP4K3Q8IVH8 894 aa8.37□□□□□ -1.07
NSMCE2-211ENST00000523549 CACTIN-AS1Q8N1I8 211 aa8.37□□□□□ -1.07
NSMCE2-211ENST00000523549 CAPN12Q6ZSI9 719 aa8.36□□□□□ -1.07
NSMCE2-211ENST00000523549 OR13H1Q8NG92 308 aa8.36□□□□□ -1.07
NSMCE2-211ENST00000523549 TRIM33Q9UPN9 1127 aa8.36□□□□□ -1.07
NSMCE2-211ENST00000523549 TM4SF5O14894 197 aa8.35□□□□□ -1.07
NSMCE2-211ENST00000523549 COL13A1Q5TAT6 717 aaPredicted RBP8.35□□□□□ -1.07
NSMCE2-211ENST00000523549 RBSNQ9H1K0 784 aa8.35□□□□□ -1.07
NSMCE2-211ENST00000523549 STK32AQ8WU08 396 aa8.34□□□□□ -1.07
NSMCE2-211ENST00000523549 KRTAP4-12Q9BQ66 201 aa8.34□□□□□ -1.07
NSMCE2-211ENST00000523549 CXXC1Q9P0U4 656 aaPredicted RBP8.34□□□□□ -1.07
NSMCE2-211ENST00000523549 GALNT11Q8NCW6 608 aa8.33□□□□□ -1.08
NSMCE2-211ENST00000523549 DCAF11Q8TEB1 546 aa8.33□□□□□ -1.08
NSMCE2-211ENST00000523549 PIK3R5Q8WYR1 880 aa8.33□□□□□ -1.08
NSMCE2-211ENST00000523549 MUC3BQ9H195 1237 aa8.33□□□□□ -1.08
NSMCE2-211ENST00000523549 PPME1Q9Y570 386 aa8.33□□□□□ -1.08
NSMCE2-211ENST00000523549 UBAP1LF5GYI3 381 aa8.32□□□□□ -1.08
NSMCE2-211ENST00000523549 FSTP19883 344 aa8.32□□□□□ -1.08
NSMCE2-211ENST00000523549 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.32□□□□□ -1.08
NSMCE2-211ENST00000523549 UBL7Q96S82 380 aaPredicted RBP8.32□□□□□ -1.08
NSMCE2-211ENST00000523549 FAM13BQ9NYF5 915 aa8.32□□□□□ -1.08
NSMCE2-211ENST00000523549 KIF4AO95239 1232 aa8.31□□□□□ -1.08
NSMCE2-211ENST00000523549 ATG7O95352 703 aa8.31□□□□□ -1.08
NSMCE2-211ENST00000523549 ADAMTSL4Q6UY14 1074 aa8.31□□□□□ -1.08
NSMCE2-211ENST00000523549 AGGF1Q8N302 714 aaeCLIP8.31□□□□□ -1.08
NSMCE2-211ENST00000523549 LINC01387J3KSC0 135 aa8.3□□□□□ -1.08
NSMCE2-211ENST00000523549 ZBTB39O15060 712 aa8.3□□□□□ -1.08
NSMCE2-211ENST00000523549 PTCD1O75127 700 aaKnown RBP8.3□□□□□ -1.08
NSMCE2-211ENST00000523549 ZAP70P43403 619 aa8.3□□□□□ -1.08
NSMCE2-211ENST00000523549 HYAL2Q12891 473 aa8.3□□□□□ -1.08
NSMCE2-211ENST00000523549 NAA30Q147X3 362 aaPredicted RBP8.3□□□□□ -1.08
NSMCE2-211ENST00000523549 ATP11AP98196 1134 aa8.29□□□□□ -1.08
NSMCE2-211ENST00000523549 KRTAP1-3Q8IUG1 177 aa8.29□□□□□ -1.08
NSMCE2-211ENST00000523549 MKNK1Q9BUB5 465 aa8.29□□□□□ -1.08
NSMCE2-211ENST00000523549 STIM2Q9P246 746 aa8.29□□□□□ -1.08
NSMCE2-211ENST00000523549 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.28□□□□□ -1.08
NSMCE2-211ENST00000523549 TMEM164Q5U3C3 297 aa8.28□□□□□ -1.08
NSMCE2-211ENST00000523549 CEP120Q8N960 986 aa8.28□□□□□ -1.08
NSMCE2-211ENST00000523549 CLP1Q92989 425 aaKnown RBP8.28□□□□□ -1.08
NSMCE2-211ENST00000523549 KCNK4Q9NYG8 393 aa8.28□□□□□ -1.08
NSMCE2-211ENST00000523549 SLAIN2Q9P270 581 aa8.28□□□□□ -1.08
NSMCE2-211ENST00000523549 FNDC3AQ9Y2H6 1198 aaKnown RBP8.28□□□□□ -1.08
NSMCE2-211ENST00000523549 RAXQ9Y2V3 346 aa8.28□□□□□ -1.08
NSMCE2-211ENST00000523549 WISP1O95388 367 aa8.27□□□□□ -1.09
NSMCE2-211ENST00000523549 CD68P34810 354 aaPredicted RBP8.27□□□□□ -1.09
NSMCE2-211ENST00000523549 CD97P48960 835 aa8.27□□□□□ -1.09
NSMCE2-211ENST00000523549 TTC39BQ5VTQ0 682 aaPredicted RBP8.27□□□□□ -1.09
NSMCE2-211ENST00000523549 CEP135Q66GS9 1140 aa8.27□□□□□ -1.09
NSMCE2-211ENST00000523549 ARMC10Q8N2F6 343 aa8.27□□□□□ -1.09
NSMCE2-211ENST00000523549 GPR152Q8TDT2 470 aa8.27□□□□□ -1.09
NSMCE2-211ENST00000523549 RASSF4Q9H2L5 321 aa8.27□□□□□ -1.09
NSMCE2-211ENST00000523549 GLB1P16278 677 aa8.26□□□□□ -1.09
NSMCE2-211ENST00000523549 CDC27P30260 824 aa8.26□□□□□ -1.09
NSMCE2-211ENST00000523549 SPACA7Q96KW9 195 aa8.26□□□□□ -1.09
NSMCE2-211ENST00000523549 PBX4Q9BYU1 374 aa8.26□□□□□ -1.09
NSMCE2-211ENST00000523549 LACRTQ9GZZ8 138 aa8.26□□□□□ -1.09
NSMCE2-211ENST00000523549 ABI2Q9NYB9 513 aaPredicted RBP8.26□□□□□ -1.09
NSMCE2-211ENST00000523549 SMNDC1O75940 238 aaKnown RBP eCLIP8.25□□□□□ -1.09
NSMCE2-211ENST00000523549 MED26O95402 600 aa8.25□□□□□ -1.09
NSMCE2-211ENST00000523549 CYP2E1P05181 493 aaPredicted RBP8.25□□□□□ -1.09
NSMCE2-211ENST00000523549 SCNN1AP37088 669 aa8.25□□□□□ -1.09
NSMCE2-211ENST00000523549 TXNDC11Q6PKC3 985 aa8.25□□□□□ -1.09
NSMCE2-211ENST00000523549 KIAA1211Q6ZU35 1233 aa8.25□□□□□ -1.09
NSMCE2-211ENST00000523549 ADAM19Q9H013 955 aa8.25□□□□□ -1.09
NSMCE2-211ENST00000523549 PCMTD2Q9NV79 361 aa8.25□□□□□ -1.09
NSMCE2-211ENST00000523549 FSCN2O14926 492 aa8.24□□□□□ -1.09
NSMCE2-211ENST00000523549 IGLV1-40P01703 118 aa8.24□□□□□ -1.09
NSMCE2-211ENST00000523549 KLHL23Q8NBE8 558 aa8.24□□□□□ -1.09
NSMCE2-211ENST00000523549 POP1Q99575 1024 aaKnown RBP8.24□□□□□ -1.09
NSMCE2-211ENST00000523549 STOML1Q9UBI4 398 aa8.24□□□□□ -1.09
NSMCE2-211ENST00000523549 GSC2O15499 205 aa8.23□□□□□ -1.09
NSMCE2-211ENST00000523549 SSTR4P31391 388 aa8.23□□□□□ -1.09
NSMCE2-211ENST00000523549 LCE3BQ5TA77 95 aa8.23□□□□□ -1.09
NSMCE2-211ENST00000523549 PDE12Q6L8Q7 609 aaKnown RBP8.23□□□□□ -1.09
NSMCE2-211ENST00000523549 ABTB2Q8N961 1025 aa8.23□□□□□ -1.09
NSMCE2-211ENST00000523549 FAM46AQ96IP4 442 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms